Ptie070655.1
Basic Information
- Insect
- Phaonia tiefii
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963931995.1
- Location
- OZ008370.1:262736871-262748229[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.15 1.4e+04 -2.6 2.5 255 270 41 56 23 89 0.42 2 3 7.1e-117 6.5e-112 376.0 28.5 1 299 250 549 250 550 0.92 3 3 0.054 4.9e+03 -1.2 3.8 212 245 571 603 552 623 0.53
Sequence Information
- Coding Sequence
- ATGACGGCGAAACAAAGTTCCAGTGACATTGTTGGATGCGGTGGTGGTGGACATTCTGTTCCAACAAAGAATAATAATAGCAAAAACAACAATAGTAATAACAAGAATTCGAACAagaaagcaaataaaaaatcattaaagtcAAAGGCACAGaaagtcaaaaacaacaacattactaccaacagcaacaacaacgtcgCCAAAATcagcagcaataacaacaacggccACGAACAAATTGTAAACGATGAAATCATCGAGGAGTTCGATTTCAGTGATAGTGATTTAGCCGAACTCAATGCGTGTGGAGACGACAGCCAGGTAGCACCACCACCACCTCCGCCTATAGAAGAAGGTATAGAAGCCAAAGAGACGGAGATGGTGGATACTCGAACCCAAACCGCTGCTGCCGCAAATGATAATGAACAGGTGggagaaaaaacaacaacagcggaAACAGCACCAGGGGAGAGACAAGCAAATGATAACAACGTTAAACATATTGTTGCTGCGAGCAGTGCTGAAGAAGATCTATTGACTAATAATAGTAATTCCATGGAAACTGAAGGATGTCAAGATATTGTCAACATAACAACCGCTTCGAAACAAACAAATGATTTGAGCACGGCCACTGTGCCAGAAGACAGTGGGAGTTGCAAAAACGACATAAATGATAATGACTCTGAGTATATTGATGAGCCCTACGATGAACTCTTGGTGCAGTTTCTTGATGAGGCAAATGACATTGCTGAGGCGAGATTAGCTGCCCGGAGACAAGCTCGAGCAGAAGCTCGAGAGATACGTATGAGAGAGTTGGAACGTCAACAAAAAGAACAAGAAGTGAATGCGGATCGTGTGTTTGACATGCATACAACGGCCTCTGGTATAGACGTATTGTCTCGGACACGACTGGGCATGGGGAGTGCATCACCAGCAATCAGTGGCTTATTAAATTCAACACGTGGGGGCAATTCCATGTCATCGAGACGCAGCAGCGAAGATTCTCTAGAGGAGGAGGGTCGGAGTTTGCGAGATATACGCCATGAATTAAAGGACGTAGAGGAGAGATTTCGCAAGGCCATGATTGCTAATGCCCAGTTGGATAATGAACGTGCTTCACAAACGTATCAAATACAATTGCTAAAAGATAAACTAGAGGATATGGAAGAATCGTATGCCCAGTTACAGCGTGAATTCAAAGAAAAATCACGCGATTGCAATGCTTTGAAGCGTTCATTGGATAAACTTAGTGAAGAACTGAAGCTTGTACAGGGCCAACTTAATGAGAGGGATACACTTATAGCCGAACAAGGTTtagttattgtggccgtcgaaaATGAGGATGGTACGGATGCCAAGCGTGCTCTAGTCAGCGTAGAAAATGCACAATTATTGGGATCTGTTCAGGGTTCTTTAGATGTTCGACTTAAGAAATTCACTGAAGAAAAACAACAATTACAAGCAGAAGTCCAACAGTTGCAAGAACAATTGGAAACATACAAAAGCCAAGGCAAAGGTAGAGGTCGAGGAAACTCTTTAAATGGTCCCCTAGGGTCAGATGATGACGAATACGAAGCACAAAGAGAAGCCAACAAAATTATATCTGACTATAAGTATAAATTACAAAAGGCTGAACAAGAAATCGCTAGTCTACAATCAAGTTTAGCTCGTTCAGAAACTCAAGTTATACGTTACAAAAGTACAGCTGAGGCAGCCGAAAAAGCCGAATCAGAATTGAAAATAGAAAGAAGGAAATTGCAGAGGGAGAATCGAGAGGCAATGGAGAAACTTGAGGAACTCGAAACGTCGAACAATCATTTAATTAAACGTCTGGATAAGTTAAAGAATGCCAAGAGTGCTCTTCTGAAGGATCTTTGA
- Protein Sequence
- MTAKQSSSDIVGCGGGGHSVPTKNNNSKNNNSNNKNSNKKANKKSLKSKAQKVKNNNITTNSNNNVAKISSNNNNGHEQIVNDEIIEEFDFSDSDLAELNACGDDSQVAPPPPPPIEEGIEAKETEMVDTRTQTAAAANDNEQVGEKTTTAETAPGERQANDNNVKHIVAASSAEEDLLTNNSNSMETEGCQDIVNITTASKQTNDLSTATVPEDSGSCKNDINDNDSEYIDEPYDELLVQFLDEANDIAEARLAARRQARAEAREIRMRELERQQKEQEVNADRVFDMHTTASGIDVLSRTRLGMGSASPAISGLLNSTRGGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEDMEESYAQLQREFKEKSRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFTEEKQQLQAEVQQLQEQLETYKSQGKGRGRGNSLNGPLGSDDDEYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAESELKIERRKLQRENREAMEKLEELETSNNHLIKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -