Pfun023042.2
Basic Information
- Insect
- Phania funesta
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963932375.1
- Location
- OZ010655.1:85348288-85357403[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2 3.1e+04 -13.7 18.3 59 201 12 163 1 171 0.48 2 3 4.2e-116 6.6e-112 374.5 26.9 1 299 347 643 347 644 0.94 3 3 0.13 2.1e+03 -1.5 3.4 135 158 678 701 647 718 0.48
Sequence Information
- Coding Sequence
- ATGTCTGTGGAGCAAAAATCAACTGATAAAAATGTTGTaactacagcaacaacaacaacaagcccAAATTCGAGTTTaacaaaatctaataaaaagaATCAAAACAACAGCTTTAGTAAtaagaaattcattaaaaaagcaTGGAAGAcgtcgaaaaataaaaagcttgcAAACACTAATAAtgtcaacaacaacagcaacaacaaaagtaagaattataaaaaccaaaataacaacaacaatgttgaAATGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACTGATTTAAAAGATCTCGACGTTACAAAACCCGAagaaactaacaacaacaattccAATGCTAACGCAAAGCTTTTAAATGAcggcaacaacaaattaaaggaATGTGACGAAGTTGACAAAAATTCGGGCGtgcaattacaaaatataacaaatgataataacaataatctTAATGATGAAGGAAcagaaaaagaacaacaacaagagGTGGGACTATTCTTATCATCGCTAATTGATAATGTTGATagacaaaacgaaaaaaacgcAAAAGGCAGTGAATTAGTCACACCAATATCACTAACGAAACAAATTACAATTAGCACCGAAGCAAGTGTATATGAAAGCGAAATTGATCGAAAACTGCATAAAGGCGAGTTATCCAAAACTGAAAAAAACGCTGAAAACGAAACTAATAGCGATATTTTGCCCAACAAAGACTCATGTATTCTTAACGTACAAATCTCCAATAGTTCTATTGTAAGCGAAAACTCAATGAGCTGTTGTGAGTCTGATAACAATGATAATATGACAATATCAACATCTTCAGACATAAAGTCTGTGAATACAAATGATATTTCAGATTCGTCGCCTTTGATTGGCATTAAAGAGACTAGTGATGGCATTGAACTCGATAACAGTGTTccaaataatgatgatgatggcaATGAAAATAATGATGATGAATATGCCGAACCAAATGATGAACTTTTAGTGCAATTCCTTGATGAAGCAAATCTGATTGCTGAGGCTAGATTAGCTGCTAGGAGGCATGCTAGAGCAGAAGCTAGAGAAATACGTATGCGAGAGTTAGAACGCCAGCAAAAAGAACAAGAATCTAATGCAGATCGTGTATTCGATATGCATTCGGCGGTAACTGGAATTACACCGCTGTCACACATGCGTCTGGGTTTGGGAAGCTCCCCAGTTACTGGATTACTAAACTCAACAAGGGGCAATTCTATGTCTTCGAGACGTAGCAGTGAAGATTCCCTAGAAGAGGAAGGCCGCAGCTTAAGAGATATACGTCACGAGTTAAAGgATGTCGAAGAACGGTTTCGCAAGGCTATGATAGCGAATGCTCAGTTGGATAATGATCGTGCCTCACAAACGTATCAAATACAGTTGCTAAAAGACAAACTGGAGGATATGGAAGAATCATATTCACAATTACAGCGTGAATGTAAGGAAAAGACGCGAGATTGTAATGCCTTAAAACGATCGTTAGACAAGCTAAGCGAAGAGCTTAAATTGGTACAAGGTCAGCTTAATGAGCGTGACACACTGATAGCAGAACAAGGTTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGatgttcgaattaaaaaatttagcgaagaaaaacaacaactgcaGTCTGAAGTCCAACAGTTGCAGGAGCAATTAGAATCGTATAAAAGTCAAGGGAAAGGGCGAGGTAAAGGCATTTCTACAAATGGACCTTTAGCTTCAGACGATGATGATTATGAAGCTCAAAGAGaagctaataaaataatatcggATTATAAATATAAGTTACAAAAAGCTGAACAGGAAATTGCTAGTCTTCAGTCAAGTTTGGCCCGGTCTGAAACACAAGTTATACGTTATAAAAGTACAGCTGAAGCTGCCGAGAAAGCTGAGACCGAGCTTAAAATTGAAAGGAGGAAACTGCAAAGAGagAATCGCGAGGCAATGGAAAAGCTTGAAGAGTTGGAAACATCAAATAATCATCTCCTTAAACGTTTGGATAAACTAAAGAATGCCAAAAGTGCTTTGCTAAAGGATCTTTGA
- Protein Sequence
- MSVEQKSTDKNVVTTATTTTSPNSSLTKSNKKNQNNSFSNKKFIKKAWKTSKNKKLANTNNVNNNSNNKSKNYKNQNNNNNVEMANDEIIEELFDFSDTDLKDLDVTKPEETNNNNSNANAKLLNDGNNKLKECDEVDKNSGVQLQNITNDNNNNLNDEGTEKEQQQEVGLFLSSLIDNVDRQNEKNAKGSELVTPISLTKQITISTEASVYESEIDRKLHKGELSKTEKNAENETNSDILPNKDSCILNVQISNSSIVSENSMSCCESDNNDNMTISTSSDIKSVNTNDISDSSPLIGIKETSDGIELDNSVPNNDDDGNENNDDEYAEPNDELLVQFLDEANLIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSAVTGITPLSHMRLGLGSSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRIKKFSEEKQQLQSEVQQLQEQLESYKSQGKGRGKGISTNGPLASDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAETELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -