Pbuc020001.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phalera bucephala
Gene Symbol
Hr39
Assembly
GCA_905147815.1
Location
LR990617.1:6832647-6866805[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 5.2e+04 -9.2 12.1 105 160 245 302 55 358 0.56
2 3 4e-08 0.00069 20.7 0.1 1 21 439 459 439 475 0.90
3 3 9.9e-65 1.7e-60 207.1 0.0 152 408 492 757 468 757 0.85

Sequence Information

Coding Sequence
ATGAATATAGAAGAGGGAGACGCGGTGAAGGTGGAGGGGGGACACGTGTCCGTCACAACCATCAGTATGTCGGAACCCGAAACCAGCAATGGTCCGTTTTTGTACAGTTCGAGCGGTGTGCGGATCAGTGTGTCTTCAGAGCCTCATGATGAAGACTCCACTGACGCGGAGATCTCCAAGATCGACTTTACACATCACCAGTACGAGGTTAACATGCGTAACAAGAAAAAGCGGTCATCCAGTGGTGCCCACTGCGAGAACGAGCGGGAGAGACCTATGTCTTGGGAGGGAGAACTTTCCGACTCAGAAATGGTGATTGATACTACTGCCAACAATGACGAAAACAGCAGTTCCTTGGATCTTCAATCGTCACGGGATTCCATCGACACGCTCCGCAATGTAACCATTAAGGCCGAACCCCTGAAGAACGAGGGGTTTCAAAGCGTGGACGATGACCGGGTTTTAGACCTCAAGTACAATACCCCACTGCAGTCGCACCAACGGAGTCTCAGTATGAACAGGATATCAGTGTTAACCGACACTTCGCTATCGCTGGCGAGGCGGACCTCTTCTCCGACGAGCAGTGCAAAGTCGCTGGTCTTGGAACCTGGCTCAGTGCCATCAATTCCACAGACATCAGTCGGAGAAGTGCAGAACTTGACTATCAAGAAGGAAACTCAGTTGCCTGAGTTAAAATGCGAGCAATCGGTAGGAATGGACAAGCTGATAGGTGCTTTACACGGCTCTCCACTGCTGGGCAGGCTGCCGCGAGTACAGTCTAGCGCCAGCACGGACTCGGCAGTACACTCTATGTACACGCACAGTGTGTACAGTAGTCCGTCTGCGAGTCCCCGTGCGTCGCGGCACTACACGCCGTCCCTTTCCCGCAACAACAGCGACGCATCGCACTCTTCCTGTTACTCCTACAGCTCGGAGTTTTCGCCCACGCACTCTCCTGTACAGGGTCGACATCCGCACGTGGTGTACCGCgaggcggcggccgcggcggtGTACGAGGCATCTCCCCACGACGACGAGCCTGAACCAGCTGAAGACCGGCTCCATCACCACCAGGGTATCAGCAGACAGCAGCTTATCAACAGTCCATGTCCAATCTGCGGAGACAAAATCAGCGGGTTCCACTACGGGATCTTCTCGTGCGAATCTTGCAAGGGGTTCTTCAAGCGGACGGTTCAGAACCGGAAGAACTACATGTGCTTGAGGGGGGGCAATTGTCCAGTTACTGTGGCGACCAGGAAGAAGTGCCCTGCATGCCGGTTCGACAAGTGCTTAGGCTGCGGGATGAAGTTAGAAGCGATACGGGAAGACCGCACGCGCGGCGGCCGGTCTACGTACCAATGCTCGTACACGTTGTCCGGCGCCGCGTCCACCGGCTCGCTATTGTCGGCGCACGCGCCCGCCACGCTGCGCCACGCCTCCAGCCTTACCTGCGTAAACGGTCCAGGTTCGTACAACAGTCGAGGAGAGTCGAGTAATAGTCAAGTAACGCCGGAAATACCACCCTTATTACAGGAAATAATGGACGTGGAGCATCTCTGGCAGTACAACGAGTCGGAACTGAGCAGGCTGGGCAAGTCCACGGGCAGTCCGTCCGCCAACCCGATCCTCGCGGCGAGCGGCATCACCGCACACAACTCCAACCCCGACTTCCTGGCGGACCTGTGCAACATCGCGGACCACAGACTGTACAAGATCGTCAAATGGTGCAAGAGTTTACCGCTGTTCAAGAATATTTCTATCGACGATCAGATCTGCCTGCTAATCAACAGCTGGTGCGAACTTCTGGTGCTATCGTGCTGCTACCGTGGAGTTAGTACTCCCGGCGAGGTGCGCGTGGGCGGCGGCCGCGGAATCACTCTACACCACAGTGCCAAGTTGGGTTTGACGCCGTGTATAGAACGAATGTTGAGCTTCACCGACCACTTGAGAAGGCTGCGGGTCGACCGATACGAATACGTTGCGCTCAAAGTCATCGTACTGCTCACTTCAGATGCCCCTGACCTTCGCGAAGTGGAGAAAGTGCGAGCGTCCCAAGAGAAGGCATTAGCCGCGTTGCAAGCTTACATCGCAACGCACTCGCCCGGCACGCCGGCCAAGTTCGGAGAACTGTTGCTGCGTATCCCCGAGCTGCAACGAACATGCCAGTTCTTCATGCAAGTTGGCAAAGAAATGCTGAACCCCGCGAACAAGAGCAAAGACGGCGATGGCCCGAGCTTCAACTTGCTCATGGAACTTCTGAGGGGCGACCACTGA
Protein Sequence
MNIEEGDAVKVEGGHVSVTTISMSEPETSNGPFLYSSSGVRISVSSEPHDEDSTDAEISKIDFTHHQYEVNMRNKKKRSSSGAHCENERERPMSWEGELSDSEMVIDTTANNDENSSSLDLQSSRDSIDTLRNVTIKAEPLKNEGFQSVDDDRVLDLKYNTPLQSHQRSLSMNRISVLTDTSLSLARRTSSPTSSAKSLVLEPGSVPSIPQTSVGEVQNLTIKKETQLPELKCEQSVGMDKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVVYREAAAAAVYEASPHDDEPEPAEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPATLRHASSLTCVNGPGSYNSRGESSNSQVTPEIPPLLQEIMDVEHLWQYNESELSRLGKSTGSPSANPILAASGITAHNSNPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHHSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQAYIATHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01180394;
90% Identity
iTF_01076559;
80% Identity
iTF_01173379;