Pchl003338.2
Basic Information
- Insect
- Petrophora chlorosata
- Gene Symbol
- HIVEP1
- Assembly
- GCA_951640565.1
- Location
- OX621190.1:7792018-7798377[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 9.4e-05 0.0085 17.3 0.6 1 23 148 170 148 170 0.98 2 8 0.0011 0.1 13.9 0.6 6 23 181 200 176 200 0.90 3 8 0.00034 0.031 15.6 0.0 1 21 434 454 434 455 0.95 4 8 2.8e-06 0.00026 22.1 2.0 1 23 1215 1237 1215 1237 0.99 5 8 6.3e-05 0.0057 17.9 3.2 1 23 1243 1267 1243 1267 0.92 6 8 1.1e-05 0.001 20.2 0.9 2 23 1677 1698 1677 1698 0.97 7 8 0.0003 0.027 15.7 1.5 1 23 1704 1728 1704 1728 0.92 8 8 0.0014 0.12 13.7 2.6 1 23 1749 1773 1749 1773 0.93
Sequence Information
- Coding Sequence
- ATGCCGCTTACACAGGAAAAGCGTTTGGACGCAAATTTTTCTAACAACAATGACCACAGCTACTTGCATAAAAAGTTCAAGAAAATGGCAACTACGATTGCAGTGTTTCCTCCACCACATTTACCTAAGGGGGGAGAAACTAGACAAAAGGAAACTAACATAGCAAATAGCACTTGCGGTGTTTCATTTTCTAATGGAAGTATAGCCACGGCCCACCCAGAAgtagagaaaataaaagaaGGTCGACTGCACCTGGACGCTAAGGATGTCGTGAACAAtgtacaaattaattttaacgATGAAAATAGTAGAATaagtaatgtaaataatattgttcAAGTATCTGGTCAGACCAGTTTTACTGAAGATTTTTCAAATAAGACTGAAAACCTTGAAAATGATTTTATCAGGGATAACTACAATGGGAGTGTAGGCGGGCGTTATGTATGCCCTTATTGTAAATTATCTTGTGCCAAGCCTTCAGTACTACAGAAACATATCAGAGCTCATACAAATGAACGACCTTACCCTTGCATTCCTTGTGGATTTGCTTTTAAAACGAAATCGAACCTATATAAGCATCAAAGATCTCGAACACACGCTTTAAGATTGCAAGGCGCAGACGTACCTGTGACTATAAACGATGATGACCTGTCTGGTGGATCGGAAAGCGATACGTCTATTCCGCCAACATCTTTCTCAGAAACCGGTTCTGACTCCTCAAATGTGCGGGTTGATAATTACGAATTCAGAAGATTTTCCCCTAGTGTGTCCCCAGAATCAATGAATGAAAACGGTTTATCGTCCATGAGCATGAATTTGTCGTCAAACATGAAcgataacaaaacaaaaacaatatataaaccTAAATTCAGAGCAGCATTTTATCAAGAAATTGATGAAAAAGATAAGTTTAAGAAATCGATTTCACCAAATGCTGATTTTCTTACAGAACATATCTCTAAAATTATATCAGATAACGAAGCCATTGTGGATGTAATAGAAACGCCGCTCCAAAAGAAGTACGGCAAAATAAAGCAAATCGCAGAGAGTAAACAATTTTTGAATGAAACTTTTGATATAAAATCAGATTCGTCGCCGCTTAATTTGACGAAAAATAATCACGATGCAGACCATCCTTTTAGAAAAAGGTCTCATTCAGAAACGTTTTCTCACATCGACCATCAAAAACATCCTTTGAATCCAGAGGGATCAATTATAAAAGACCTTCTCCTTAAAACCAAGATGAATGGTTTAGCAGTGAGAGAACTCACTGGAGAATTGATCGAGGGATCCCTGTATGTATGTCCATTATGCCAGATAATTTTCAGAAGTGCGGACAATTTAGAAACTCACAGAATGTATTACTGCGGTAAAGGTAGCGTTACGAATTCACCCGTATCTCAAAAAGAGATACAAATTATAAGACCAGAAAATATATTTGTCAGAAGCCACTCGATCAATGTTCGTTTACCGGAATCACCGCCTTTCTCAAAGTCTAGTATTCCTAACAAATCGCCACCTTTAAGAATCAAACCAGAAAATCTAGTTATCAtgaaacaagaaacaaatgacGTTATTGCTCCTTTGCCATCTCCAGGGCCGTTGTTGGGAAACACAAGACTTGTAGACATAAAAGATACCAGAGTCCCTTCTGATTGTAATAGAAAAAACGAAAATATGAAGTTAAAACCCATGCCAAGCCCAAAACGACGAATAGACAGCAGATCAGATACATACAGTCCTAGATTGGTGGAAAATATTTCTCCCAGGTCTACCGATTTTTACGCCCAATCTAAAATACGATGTATTGATGCAAATCCAGCAGCATTACGTGCAGTTGAAGAGATGACGCAACATATGAGACATAACTCTACATCTCTACAGATGTTTGGAGGTGAAGTAAAAATCGTTGATCACTCTGGAAGCACAACTACTTTGCGCATTGAGCCAAATAAAAACCAATTGTCCCCCATATTAATACATCATAATCTTTCCCCATCAAAGCTAGTAAATGATGCCGATGCTAGCAGTGTTGTAGTTCGATCAAGTTTGCAGTCAGGTGGAACAATGATGCATAATCCGCCGACCCCTAAGGAAACTATGGGAACTCCGCAGCCACAAACTCCTAGGATAACGATTTCTACTCCTGGAACTTCAAGTTCAAGTTTGCCAAACATTCATGATAGATCGCATTTTCAGTTTCCACCACTTAGTGCAATTACAGCTTACAATCCGCTGACACTGCCTCCTCTCAGTCCGTCATTATCGCCTAACGGAGCAACAACTATTTTCCATGGAGGAAAACTAATACCACATGTTCCTGGAATGCCTGGACCCAATACGCCTGGGATGTATACAAGCCATCACAATGTACCACCGAAAAACATAGTCAATAGTGATCATAGTAAAAGATCTACCACGCCTTTGCGTGAGGATATTCATGGAGGATTGTTACAAATAAACATCCAGTCAACGAAAGGACCAATGCTAACCAAATATGAAACTCAACAATTGCGTAACACGAGAAGCCCGCATATAAGGTTAACCCACAATGATTCCGAAAAGATAAATCAAAGCcatgataattttaataatgatgGACATCAAAATTTTGTCTCGACAGTGCCtcttataaaagtaaaaaatacagACGAGGCTAACTCTTTCCCTAAAATAATTTCACCAGGCATTGCTAAACCGGTACTCAGACAAGAAGGAGCTTTAAAAAGAAGTGCAGACGGTGTACCTCGAACACCACTTTTTAAAGAGAATATGCATTATTCATCCAATAAATCGAAAAATCGGgacttaaaagtaaataatggCCCTTTACTTAAAACCATTGAAATTAAGTCAGAAAAAGacagaaattttaattttgaaaatttaataacGAAAGCAGAGATTTTCAACAGTCAAATTCCAAGTTCCTCTGAAGTGCAGAAAAATACGAATGCACAAGAATCTCCGACAACTATACAAAACGAGAGATCCGAAacgttatattttcaaaagAACGTATTAGCTAAGCCAAATGCGGAAGACAGAAAACCGAAATTTTTAAGACCTTCTACATTACCTTTGAAACCTGGCACATATACACCGAAAAGACACCACGGCATAACACCTAACTCAAATACAATGCCGTTAGTATCACCAGAAACACCAAGACCTGCCAAAGCTTATGGACAACTTTATTTGAACGGCAATGCTTATACTTATTTGGGCTTGAAATGCTCAACGAAAGTTTTTTACTGCACCATCAATCGACCGCAGCCAACTTATGTTCCTAATCAACATTTTCTATCCATGTATAGTAATTGGCAGTTATTATCCGAGCTGACGCCAGACCCGCTGGGGCTGTCAGCATCGTCTGCTATGTCTCTATATGACTCACGTCATCGACCGCAAAACGTGGCCCGCGCAGTGATTAAACAGGATCTCATCTTGACTCATTCATCGCAGTGGAATAAAAATTTCAAGGACTATAAACAGGCAATTCAAACTATTGATACCAAGAAACTAGAAGATAAAAATGGTCAGTCCTCCGATAACATAATGGCGCCTAAAAAAGAATTAGCCGGAGGTTTCGAGAGTAACGAAGAATACACCTATGTCCGCGGGCGAGGGAGAGGGCGGTATGTTTGCTCAGAGTGCGGCATTCGCTGCAAAAAACCGTCAATGCTCAAGAAACACATTCGCACTCATACAGATGTGCGACCGTATACGTGTGTCCATTGCGCCTTCAGTTTCAAAACGAAGGGCAACTTGACGAAACATATGAAGAGTAAAGCTCACTACAAAAAATGCAACGAGTTGGGTATAAATCCAAACGAAGGCCACGATCCGGATAGTGGAGAAATGGCACCGTGTTCCGGTGAATCTGGCGACGATACGGATACCGATGGCGACGAAGGAAACGAGGGGGAAACGGAATCAAGTGATACAGAAACTTGCAAATCCCGTTTGCCGGAACACGAAGCAGCGCATTGTTTGTTGTCACTAGGATGTTCTAGGCCAACAACATCAGCTGCGCCGGGTCTTATAACCAGTGCCAGGCCAACCACATATCCATATACTCCTACAGGGTTGGAAATTGCCACTTCGGAAATACCCGACAGAGTAAATTTACCACGGAATTCAGTAGAATCTGGAGAAGATGCTGAAAATGAACCCATGGATTTAAGCAAAAGTGAGATAAAGACACCTTCGACACCTACTACTCCAAACATTCCTGAAATTCCTACTGCTAGAGAATCCAGTGTGCTCGCGTCTCTAGCTTCTAACACAGCCAAACTTCCACAGCATCAAACTCAATGGACAAATGGAGAACCTATGTTACACACGTACTTAACAGAAAGGGCGTTGTTAGACTCAAAAATAAAGCAAAGTCAACTAACATGTAACTTCAGTAAATTAAGGAAAATTGGTTTAGAATCGTCTACCTTTTCAGAAAAATCAGTAAAGGAAGAAAATACTAAAACTGTGTCAACTAATAACAGTCCTGTAATGTCTGTTTCTTTGCCCCAGCAAACTTGTGTTGCTAATGATGAAAAGTTAAAATCTTTAAAGGAAAGCGACACTCAAAAACCTATTGTTGTATCAAAAGATGCAGGCGTACCGATATCGAAGGACCCTTTACATCATACAAACTCAACTCAAGAGCTAAAACGGCATGTCGTTCAAAACAATAGCAACACAGAAAACGCGAAACACGTAgtttctgaatatttaaaacatgCTCGAATTAATCTCATCAAAACACACGAAGAAGGTCTATCGAGTCAAAATGATAACATAACCAATGATAACAGTGGTAATAATACTGGTCTTGAGGAAAACACGAAAGTTGAAGAGATAAACATATCTGATTCAGATTCAATAAAATTGCCGTCTTTAGAACATGAACCCATTGCTCGAAAAGTTGTGATCGGAGTTGGCGGCGTAGCTTTCAAGGTAGCTAAAGGAAAAGAATACGATAACGCTTCATATCCACCAGGAAGACTTATGGAGGACGGCCGCAGGGTGTGTGATTTTTGTAACAAGACTTTTACTAAACCCTCGCAGTTAAGATTACACCTAAACATTCATTACATGGAGCGACCTTTCAGGTGTAGTGTTTGCGCTGTTAGTTTTCGTACTCGCGGCCATTTGCAAAAGCATGAGCGTTCAGGTTCTCACCACAACAAGGTTTCTATGACGTCGACATTCGGCGCCGCAACTTCTGTTAACCCGCGACCATTCCGGTGTTCCGATTGCAACATTGCTTTTCGGATCCACGGTCACCTGGCGAAACACCTCAGGAGTAAAATGCATGTAATGCGACTTGAATGTCTATTCAAATTGCCTTTTGGTACATTTACGGAAATTGAACGTGCGGGTGTCAGTTTGACAGACATAGACACGACTGATTGTGCGAGCTCTCTGGCGAGTCTCCAATCACTCGCGAGGAAACTTCACGAGAAGGATCCTACGAAACTGGAGTACAGAGACCCCGGGAGCGCGACGGGCACTCCCACCGGCAGGGAATTGTCTGAAGATGAGGAAACTTCTCTCAATTACGAAAATATGAGTGAAAGTGAAAAAGATAGTGAAATAAACACTATGGAGAACAGTGAAGGACACGACAATGAAACACGAGTTAATTATAGTGCCACAGATATTTAG
- Protein Sequence
- MPLTQEKRLDANFSNNNDHSYLHKKFKKMATTIAVFPPPHLPKGGETRQKETNIANSTCGVSFSNGSIATAHPEVEKIKEGRLHLDAKDVVNNVQINFNDENSRISNVNNIVQVSGQTSFTEDFSNKTENLENDFIRDNYNGSVGGRYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTKSNLYKHQRSRTHALRLQGADVPVTINDDDLSGGSESDTSIPPTSFSETGSDSSNVRVDNYEFRRFSPSVSPESMNENGLSSMSMNLSSNMNDNKTKTIYKPKFRAAFYQEIDEKDKFKKSISPNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFLNETFDIKSDSSPLNLTKNNHDADHPFRKRSHSETFSHIDHQKHPLNPEGSIIKDLLLKTKMNGLAVRELTGELIEGSLYVCPLCQIIFRSADNLETHRMYYCGKGSVTNSPVSQKEIQIIRPENIFVRSHSINVRLPESPPFSKSSIPNKSPPLRIKPENLVIMKQETNDVIAPLPSPGPLLGNTRLVDIKDTRVPSDCNRKNENMKLKPMPSPKRRIDSRSDTYSPRLVENISPRSTDFYAQSKIRCIDANPAALRAVEEMTQHMRHNSTSLQMFGGEVKIVDHSGSTTTLRIEPNKNQLSPILIHHNLSPSKLVNDADASSVVVRSSLQSGGTMMHNPPTPKETMGTPQPQTPRITISTPGTSSSSLPNIHDRSHFQFPPLSAITAYNPLTLPPLSPSLSPNGATTIFHGGKLIPHVPGMPGPNTPGMYTSHHNVPPKNIVNSDHSKRSTTPLREDIHGGLLQINIQSTKGPMLTKYETQQLRNTRSPHIRLTHNDSEKINQSHDNFNNDGHQNFVSTVPLIKVKNTDEANSFPKIISPGIAKPVLRQEGALKRSADGVPRTPLFKENMHYSSNKSKNRDLKVNNGPLLKTIEIKSEKDRNFNFENLITKAEIFNSQIPSSSEVQKNTNAQESPTTIQNERSETLYFQKNVLAKPNAEDRKPKFLRPSTLPLKPGTYTPKRHHGITPNSNTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVARAVIKQDLILTHSSQWNKNFKDYKQAIQTIDTKKLEDKNGQSSDNIMAPKKELAGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCAFSFKTKGNLTKHMKSKAHYKKCNELGINPNEGHDPDSGEMAPCSGESGDDTDTDGDEGNEGETESSDTETCKSRLPEHEAAHCLLSLGCSRPTTSAAPGLITSARPTTYPYTPTGLEIATSEIPDRVNLPRNSVESGEDAENEPMDLSKSEIKTPSTPTTPNIPEIPTARESSVLASLASNTAKLPQHQTQWTNGEPMLHTYLTERALLDSKIKQSQLTCNFSKLRKIGLESSTFSEKSVKEENTKTVSTNNSPVMSVSLPQQTCVANDEKLKSLKESDTQKPIVVSKDAGVPISKDPLHHTNSTQELKRHVVQNNSNTENAKHVVSEYLKHARINLIKTHEEGLSSQNDNITNDNSGNNTGLEENTKVEEINISDSDSIKLPSLEHEPIARKVVIGVGGVAFKVAKGKEYDNASYPPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSVNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYRDPGSATGTPTGRELSEDEETSLNYENMSESEKDSEINTMENSEGHDNETRVNYSATDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00206403;
- 90% Identity
- -
- 80% Identity
- -