Bbet001848.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Biston betularia
Gene Symbol
HIVEP1
Assembly
GCA_905404145.1
Location
FR989864.1:5891629-5898423[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 9e-05 0.0072 17.3 0.6 1 23 147 169 147 169 0.98
2 8 0.00066 0.053 14.6 1.2 1 23 175 199 175 199 0.89
3 8 0.00032 0.026 15.6 0.0 1 21 431 451 431 452 0.95
4 8 2.7e-06 0.00022 22.1 2.0 1 23 1215 1237 1215 1237 0.99
5 8 0.0015 0.12 13.4 3.1 1 23 1243 1267 1243 1267 0.91
6 8 1.1e-05 0.00085 20.2 0.9 2 23 1673 1694 1673 1694 0.97
7 8 0.00029 0.023 15.7 1.5 1 23 1700 1724 1700 1724 0.92
8 8 0.0013 0.11 13.7 2.6 1 23 1745 1769 1745 1769 0.93

Sequence Information

Coding Sequence
ATGCCACTCACACAAGAGAAGCGTTTAGACGCGAATTTTTCCAACAACAATGATCACAGCTACCTGCATAAAAAGTTCAAGAAAATGGCAACTACTATTGCAGTGTTTCCACCAAATTTACCGAAAAGTGGAGATACTAGACAAAAGGAAACTAATATAGCAAATAGTACTTGTAGCGTTTCAATTTCTAAAGGAAGTATTGCCGCGGCTCACCCAGAATTAGAGAAAATAAAAGAAGATCGGCATCATTTAGATGCTCAGGAAGTGGAGAAAAATGTACAAATTAACTATAATGATGAAAATTTTAGAATAAGTAATGTAAATAATATTGTTCAAGTATCTGGTCAGACCAGTTTTACTGAAGATTTTTCTAATAAGACTGAGATCCTTGAAAATGATTTTATCAGGGATAATTACAACGGGAGTGTAGGTGGTCGTTATGTATGCCCTTATTGTAAATTATCTTGTGCCAAGCCTTCAGTACTCCAGAAACATATCAGAGCTCATACAAATGAACGGCCCTACCCTTGCGTTCCTTGTGGATTTGCTTTTAAAACAAAATCGAACTTGTATAAGCACCGAAGATCTCGAACACACGCTCTAAGGTTACAAGGCGCAGATGTACCTGTGACTATAAACGATGATGACTTGTCTGGCGGATCGGAAAGCGATACGTCTATACCACCAACGGCTTTATCAGAAACCGGCTCTGATTCATCAAATGTGCGAGTCGATCATTATGAATTCAGAAGATTTTCTCCCAGTGTATCACCGGAATCAATGAATGAAAACATTACACCGTGTTATAGCATACCCTTTTCAACGAATTTAAATGATAGCAAGTCAAAATCAATATATAAACCTAAATTTAGAGCAGCATTGTACCAAGAAGTTAATGAAAAAGATAAATTTAAAAAATCTATTTCTCCAAATGCTGATTTTCTCACGGAACATATCTCTAAAATTATATCAGATAATGAGGCCATAGTAGATGTCATAGAAACACCGCTTCAAAAGAAGTACGGAAAAATTAAGCAAATTGCAGAGAGTAAACAAATGTTGCATGACAACGTTGATGTGAAATCAGACTCATCGCCGCTTAATTTAACGAAAAACAATCACGAAGAAGACCATCCCTTCAGAAAGCGATCTCACTCTGAAAGTTTTTCTCATGTCGATCACCACAAACATCCATTGAATCCAGAGGGTTCGATTATAAAAGACCTTCTACTTAAAACGAAAATGAACGGTTTAGCTTCTATTACTGGAGAGTTGTTAGAGGGATCTCTGTATGTATGTCCGCTGTGTCAGATTATTTTCCGTAGTGCCGATAACTTAGAAACTCATAGAATGTATTACTGTGGCAAAGGTAGCATTTCTAGTTCACCTGTCAGTCATCAAAAAGAGATAAAACTAATAAGGCCTGAAAATACATTTGTGCGAAGTAACTCTATCAACGTTCGATTACCTGAATCGCAGCCATATATGAAAACAAACATCGTTAATAACTCGCCGCCATTAAGGATTAAACCAGAAAATTTGATTATTATGAAACAAGAATCAAATGATATTATAGCTCCTTTACCATCGCCAGGACCTTTATTGGGAAACACGAGGCTTGTAGATACTAGAGTCCCCTCGGATTATACAAGAAAAAATGAAAGTATAAAACTAAAACCCATGGCGAGCCCAAAAAGGCGACTAGATAGCAGATCTGATACATACAGTCCTAGGCTGGTTGAAAATATTTCGCCAAGGTCAGCAAATATATATAGCCAATCTAAAATACGGTGTATTGATGCAAATTCTGCAGCATTTCGAGCAGTAGAGGAGATGACGCATCATATGAGACACAACTCTACATCTCTACAAATGTTTGGAGGTGAAGTAAAAATCGTAGATCACTCCGGAGGAACTACCACTTTACGTATTGAACCTAATAAAAACCAGTTATCGCCCATATTGATACACCAAAACCTTTCACCATCTAAGCTTGTTAATGATGGTGAAGCGAGCAGTGTTGTTGTTAGATCTAGTCTACAGTCAGGGGGCACAATTATGCATAATCCGCCAACTCCTAAAGAAACCATAGGGACACCACAGCCACAAACACCTAGAATAACGATATCTACGCCTGGAACATCGAGTTCTACATTACCAAATATTCATGACAGAAGCCATTTTCAGTTTCCACCACTGAGTGCAATCACAGCGTTCAATCCTTTGACATTGCCACCTTTAAGTCCATCGTTATCTCCCAATGGAGCATCGACTATATTCCACGGAGGAAAATTAATACCTCATGTACCAGGGATCCCAGGGCCAAATACGCCAGGAATATATGTAGGCCATCAAAATATACCATCGAAAAATACTATCAACAGTGATCTCAATAAAAAGCCATCCACGCCTGTGCGTGAAGATTTTCATAGCAATGTGTTACAAATAAATGTTCAACAGCCTAAAGGATCGAGTCTTATGAAATATGAAACGCAACAATTACGTAACACGAGAAGCCCACATTTACGGTTAATCAACAATGAGGTTGAAAAGATGAACCAAAATCATGATAATTGTAATAATGAGGGACAATATGGACAACAACACTTTGTTGTTTCTACAGCACCACTTATAAAAATCAAAAGTGCTGACGAACCACCAAATCCTTACCCAAAAAATATTTCACCAAGCATCATGAAAGGGATACCAAGGCAAGAAGGAGCTTCGAAAAGAACTGCAGACGGCGTCCCTAGAACACCAGTTTTAAAAGAAAACAACACTTATTATTCACTAAATAAATCAAAATTTCGTGATAAAGTAAACAATCCCCATGTAAAACCTGTCGACACAAAGACAGAAAAAGATAACAGGCATTTCAATTTTGAAAATTTCATAACTAAAGCGGAAATTTTCAACAATCAGATACCAAGTTCCTCCGAAGTGCAAAAGAATACAAACGCTCAAGAAACTCCTATAACTATTCAAAATGAGCGATCTGAAACGTTGTATTTCCAAAAGAACGTTTTATCAAAGCCGAATACAGAAGAAAGAAAACCAAAATTTTTAAGGCCCTCAACATTGCCTTTAAAACCTGGTACTTATACACCGAAAAGGCACCACGGAATAACACCGAACGCAAACACAATGCCGTTAGTATCACCAGAAACACCACGACCAGCCAAGGCGTATGGTCAACTTTATTTAAACGGCAATGCGTATACTTATCTGGGCTTGAAATGCTCCACTAAAGTTTTTTACTGCACCATCAATCGTCCTCAGCCAACTTATGTTCCTAATCAACATTTTCTGTCAATGTACAGTAATTGGCAGTTATTATCCGAACTGACGCCAGACCCGCTGGGGCTGTCCGCCTCGTCTGCTATGTCTTTATATGACTCACGTCATCGACCGCAAAATGTAGCTCGCGCTGTGATTAAACAGGATCTCATATTGACTCATTCATCACAGTGGAATAAAAATTTTAAAGACAATAGACAGGCGATACAAACGACTGATACAAAAAAATTAGAAGATAGTAAGGGCCAACCCTCCGATAACGTAATGACTCCTAAAAAAGAATTAGCAGGAGGCTTTGAAAGTAACGAAGAGTACACGTATGTCCGCGGACGCGGCAGAGGGCGGTACGTTTGCTCAGAGTGTGGAATCCGCTGCAAAAAGCCGTCAATGCTCAAAAAACACATTCGCACTCATACAGACGTGCGACCGTATACATGCATCCATTGCGCCTTCAGTTTCAAAACGAAGGGCAACCTGACGAAACATATGAAGAGTAAAGCCCACTACAAAAAGTGTTGTGAGTTGGGTATAAATCCGAGCGATGGCAATGAGGGGGACAGCGGAGAAATGGCGGCGTGTTCTGGAGATTCTGGCGACGACACTGATTCCGATGGCGACGAAGGAAACGAAGGAGAAACGGAATCAAGTGACACAGAAGCATACAAATCACGTTTACCAGAACATGAAGCGGCGCGTTGTTTACTATCGCTGAGCTCTCAACCGACGACATCTGCTGCGCCGGGTCTGATAACCAGCGCCAGGCCTACCACGTATCCATATACCCCAGCGGGATTGGAAATTGTCAACTTAGAAATACCCGATAGATCACCACTCCATTTGTCGCGACACTCTCCAATTGAACCAAGAATAGAGGCTGAAAATGAACCTATGGATTTAAGCAAAAGTGAAGTAAAAACACCTACACCAAACATTCCTGAAATTACCACTCCGCGAGAATCAAGTGTACTCGCATCACTTGCTTCAAATACCGCCAAACTCCCCCAACAACAAAGTCAATGGACTAACGGGGAACCTATGTTACACACATATTTGACGGAAAGAGCGCTTCTAGACACAAAAATAAAGCAAAGTCAACTAACATGTAACTTCAGCAAGTTACGGAAAGTAGATTTGGAAACCTCAACATTTTCCGAGAACGTAAAAAAAGAAGATACCGGCAAAAATATGCAATCGATAAATAATAACCCAATGGTATCTATTTCATCGCCACAAATGTCTAGAGATTTACATATCACATCTCCGAATGAAAGTGATATACAAATATCTGCTGTTGTATCTAATGACGATAATGCTGGAACTCCTAAAGATTCATCTCACACAAAGTATGTTGCCCAAGAACTGAAACGTCACCCCGGACAAAACAATACCAATACAGAAAACGCGAAACATGTGGTATCTGAATATTTAAAGCATGCTAGAATCAATCACATTAAAACGCACGACGAAAGTTTATCGAATCTAATCGATAACACATCTGAAGATAACAGCCGTAATAGTATCGGACTTGAAGAAAACACGAAAGCTGAAGAGATGAACTTATCCGATTCAGATTCATCAAAACTGCCTTCTCTAGAACATGAGCCTATCGCAAGAAAGGTCGTGATTGGTGTTGGAGGCGTAGCTTTCAAGGTAGCTAAAGGAAAAGAGTTTGATAGTGCGTCGTACGCACCAGGAAGACTGATGGAGGATGGACGCAGAGTGTGCGACTTTTGTAACAAGACATTTACTAAGCCTTCGCAGTTAAGATTGCATTTGAATATCCATTACATGGAGAGACCTTTTAGATGTAGCGTATGTGCTGTGAGTTTCCGCACTCGTGGTCATTTGCAAAAACATGAGCGCTCTGGTTCTCATCATAACAAGGTTTCTATGACATCAACATTCGGTGCCGCCACATCGGTTAACCCACGACCATTCCGATGTTCGGATTGTAACATCGCTTTCCGGATACATGGCCACCTGGCGAAACATCTTAGGAGTAAAATGCACGTGATGAGATTAGAATGCTTGTTCAAACTGCCATTTGGAACGTTTACTGAAATCGAGCGTGCCGGTGTAAGTTTGACAGATATCGATACAACCGATTGTGCAAGCTCATTGGCTAGTCTCCAGTCACTTGCGCGGAAACTTCATGAGAAGGATCCTTCCAAACTGGAGTATAGGGACCCCAGTAGTGCGACAGTGATACCTACAGGACGAGAATGTTCCGAAGATGAGGAAACTTCCCTCAACTACGAAAATATGAGTGAGAGTGAAAAGGATAGTGAATTAAAAAACACTGAGAACAGTGAAGGACACGAAGATGAAACACGAGTTAATTATAGTGCCACAGATATTTAG
Protein Sequence
MPLTQEKRLDANFSNNNDHSYLHKKFKKMATTIAVFPPNLPKSGDTRQKETNIANSTCSVSISKGSIAAAHPELEKIKEDRHHLDAQEVEKNVQINYNDENFRISNVNNIVQVSGQTSFTEDFSNKTEILENDFIRDNYNGSVGGRYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHRRSRTHALRLQGADVPVTINDDDLSGGSESDTSIPPTALSETGSDSSNVRVDHYEFRRFSPSVSPESMNENITPCYSIPFSTNLNDSKSKSIYKPKFRAALYQEVNEKDKFKKSISPNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQMLHDNVDVKSDSSPLNLTKNNHEEDHPFRKRSHSESFSHVDHHKHPLNPEGSIIKDLLLKTKMNGLASITGELLEGSLYVCPLCQIIFRSADNLETHRMYYCGKGSISSSPVSHQKEIKLIRPENTFVRSNSINVRLPESQPYMKTNIVNNSPPLRIKPENLIIMKQESNDIIAPLPSPGPLLGNTRLVDTRVPSDYTRKNESIKLKPMASPKRRLDSRSDTYSPRLVENISPRSANIYSQSKIRCIDANSAAFRAVEEMTHHMRHNSTSLQMFGGEVKIVDHSGGTTTLRIEPNKNQLSPILIHQNLSPSKLVNDGEASSVVVRSSLQSGGTIMHNPPTPKETIGTPQPQTPRITISTPGTSSSTLPNIHDRSHFQFPPLSAITAFNPLTLPPLSPSLSPNGASTIFHGGKLIPHVPGIPGPNTPGIYVGHQNIPSKNTINSDLNKKPSTPVREDFHSNVLQINVQQPKGSSLMKYETQQLRNTRSPHLRLINNEVEKMNQNHDNCNNEGQYGQQHFVVSTAPLIKIKSADEPPNPYPKNISPSIMKGIPRQEGASKRTADGVPRTPVLKENNTYYSLNKSKFRDKVNNPHVKPVDTKTEKDNRHFNFENFITKAEIFNNQIPSSSEVQKNTNAQETPITIQNERSETLYFQKNVLSKPNTEERKPKFLRPSTLPLKPGTYTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVARAVIKQDLILTHSSQWNKNFKDNRQAIQTTDTKKLEDSKGQPSDNVMTPKKELAGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCIHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPSDGNEGDSGEMAACSGDSGDDTDSDGDEGNEGETESSDTEAYKSRLPEHEAARCLLSLSSQPTTSAAPGLITSARPTTYPYTPAGLEIVNLEIPDRSPLHLSRHSPIEPRIEAENEPMDLSKSEVKTPTPNIPEITTPRESSVLASLASNTAKLPQQQSQWTNGEPMLHTYLTERALLDTKIKQSQLTCNFSKLRKVDLETSTFSENVKKEDTGKNMQSINNNPMVSISSPQMSRDLHITSPNESDIQISAVVSNDDNAGTPKDSSHTKYVAQELKRHPGQNNTNTENAKHVVSEYLKHARINHIKTHDESLSNLIDNTSEDNSRNSIGLEENTKAEEMNLSDSDSSKLPSLEHEPIARKVVIGVGGVAFKVAKGKEFDSASYAPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATSVNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPSKLEYRDPSSATVIPTGRECSEDEETSLNYENMSESEKDSELKNTENSEGHEDETRVNYSATDI