Basic Information

Insect: Petrophora chlorosata
Gene Symbol: Paxbp1
Assembly: GCA_951640565.1
Location: OX621189.1:17312881-17328204[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.98 8e+03 -3.0 0.0 210 236 259 285 256 286 0.81

2 3 1.3e-08 0.0001 22.9 0.0 2 56 516 571 515 600 0.79

3 3 7.3e-07 0.006 17.1 0.0 112 190 622 688 605 697 0.83

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.98	8e+03	-3.0	210	236	259	285	256	286	0.81
2	3	1.3e-08	0.0001	22.9	2	56	516	571	515	600	0.79
3	3	7.3e-07	0.006	17.1	112	190	622	688	605	697	0.83

Sequence Information

Coding Sequence: ATGTCTCTATTTCGAAAACCGAAGAAAATTCAGAGGCGAATGTTCTGCGCTGATGACGAGGAAGACGGCGACCCGGAGCCGCCGCCACCGCCTCTCATCAGCCAGAAGCGTGAGAAGAAGGAGAACAAGTCGGTAAAAGCCCCCAAACTCCTGAGCTTTGCTGACGAAGAAGAAGATTGTGAAGAGTTCAAAGTAAAGAAGTCTTCACAGAGCAAGCGGCTATCTAAGCGCAGAGACAAAGAGAAGAAGAAAATCCCTGACGGTGATAATAACAAAAATGATAAAGACAATAACATACATGAGGAAAACAACACAAACCATGCTGACAATGATCAAGAAAAAGAGATACCAAAGCCCAAGAAGAAAATCACTCTCGAGGGCCTCATATTATCTGGCCGAGAGGCTCTGGCTGCAGATGGCGCTGGGGATATGTCGGAAAGTGGGGGGGAAGAGGAGGAAGAAGATAGCAGGGGGTTCCACCAGTACCGGGCTGAGTCAGTCAGGGCTGCACTGGCGGTCGCACCGGGGCACATTCCTGATGCTGCACTCATCCATGCCGCAAGAAAGACCCGACAGCAGGCGCGCGAGCTGGGTGACTTCGTCCCGGTGCCGGCGGAGGCGGCGCCGGGCGCGCGGCTGTTGCGCGACGGGGAGGGCGACGACTCCGCTGACGAGGAGGAGGGCAGGATACACGTGAGAGGGCTCGACCTTCCCAGCGACAAGCCGAAACGCGGTACAGCTGCAGTGCAGTCCGATGAAGAAATAAACAGCGAGGCCGAGGAATGGGAGGAGCAACAGATGCAGAAGGCGATGCCTGCCTTGCCCGACGTCATGGGTGAAGGCGACCTGAACCCGTTCGCGGTggcgccgccgcccccgcggCTGGCGGAGGCGCCGGCGCACCTGCGGCCGctggccggcgccgccgcgccgctcgccTCCGCAGACCAGCTCGTGCTCGCGCTCAGGAACAGACTGGAGGAGCTGCGCGCCGAGCGGCAGCGCACGGCCGCCAAGAAGGAGGAAGTGCACGCGCGGCTGGTGGGCGCGGCGCGCACGCGCACGTCGCGCGGCGCGCGCTGCGGCGCGCTGGACGCCGCGTACCGGCGCGCGCAGGCGGCGCGCGGGTACCTCACCGACCTCGTCGAGTGTCTGGACGAGAAGATGCCCCAGCTGGAGGCGCTGGAGGCGCGCGCGCTGGCGGTGCACCGGCGGCGCTGCGACTTCCTGGTAGAGAGGAGGCGCGCAGACGTCAGGGACCAGGCGCAGGATGTCCTGGCGCTGGCAGCGCggccgggcgcggcgcggccgccGGACTCGGAGGAGAAGGTGCGGCGCACGGCGGAGCGCGAGgggcggcgccgcgcgcgccggctgcgccgcgaggccgccggcgccgccgccgcgcgccaccACCGCGACGGGGACTCCAGCGACGACGAGCTGCCGCCGCCGGAGGCGCAGCACTACAAGAACGAAAAAGAATCGATCCGTGGTGCGGCGGCGGTTCTGTTCGCGGACGCGCTGCCGGCGTGGCGCTCGCTGCGCGGCGTGTGCGCGCGGCTGGCGGCGTGGCGGCGCCGCGACCCGGCCGCCTACTGCGACGCGCACGCGCCCGCCGCGCTGCCCAAGCTGCTGGCGCCCTACGTCAGGCATCAGCTAATTCTATGGAACCCCCTGGCTGACGAAGACAACGAGGACTACGAGAAAATGGATTGGTACAAATGTCTGATGATGTACGGCGTGAGGGCGGAGCGCGTCGAGGGCGAGTCGTCCGACTCTGAGGCGGAGGGCGAGCCCCCGGGGGCGCCGgggggcgcggcgggggcgcCGGCGGACGCGCGTGATGACCCGGACCTCATGTTGTTACCCACCATGCTGAACAAGGTAGTGCTGCCTAAGATTACAGAGCTGGTGGAGCAGGCGTGGGACCCGGTGTGCGTGCGCGCGTGCGTGCGGCTGCGGCAGGCGTGCGTGCGCGCCGCGGgcgtgccgcgcgccgcgccggcgctgcGCCGCctggccgccgccgcgcgcgcccgccTCAACGCCGCGCTCAATGCGGACGTGTTCCtgccggcgctgccgccgcaAGTGATggagggcggcggcggcgcgttcTGGCGGCggtgcgccggcggcggcgtgcggcTGCTGCGCGGCGCGCTGGCGCTCACCGCGCCGCCGGCGCTGCTGCGCGCCGACCCCGCCGTCATGCAGCTCGTGGAGACGCTGAGCTGCGGTgcgggcgcggcgccgggcCCGTTCGCCgcgtccgccgccgccgcgctcgcggACACGCTGCCGCGCGGCGGCGAGCTgcgcgcgcgcgcgctgcgCCGCCTCGCCGCGCTCGCGCAGCTCGCACTCACACGCCTCGACACCGACAACCCGACGCATCTGAAAGCACTGGAGCAAGCGAGAACGGTCATAGCCGAGGCGAAGGCGATGGAATGA
Protein Sequence: MSLFRKPKKIQRRMFCADDEEDGDPEPPPPPLISQKREKKENKSVKAPKLLSFADEEEDCEEFKVKKSSQSKRLSKRRDKEKKKIPDGDNNKNDKDNNIHEENNTNHADNDQEKEIPKPKKKITLEGLILSGREALAADGAGDMSESGGEEEEEDSRGFHQYRAESVRAALAVAPGHIPDAALIHAARKTRQQARELGDFVPVPAEAAPGARLLRDGEGDDSADEEEGRIHVRGLDLPSDKPKRGTAAVQSDEEINSEAEEWEEQQMQKAMPALPDVMGEGDLNPFAVAPPPPRLAEAPAHLRPLAGAAAPLASADQLVLALRNRLEELRAERQRTAAKKEEVHARLVGAARTRTSRGARCGALDAAYRRAQAARGYLTDLVECLDEKMPQLEALEARALAVHRRRCDFLVERRRADVRDQAQDVLALAARPGAARPPDSEEKVRRTAEREGRRRARRLRREAAGAAAARHHRDGDSSDDELPPPEAQHYKNEKESIRGAAAVLFADALPAWRSLRGVCARLAAWRRRDPAAYCDAHAPAALPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRAERVEGESSDSEAEGEPPGAPGGAAGAPADARDDPDLMLLPTMLNKVVLPKITELVEQAWDPVCVRACVRLRQACVRAAGVPRAAPALRRLAAAARARLNAALNADVFLPALPPQVMEGGGGAFWRRCAGGGVRLLRGALALTAPPALLRADPAVMQLVETLSCGAGAAPGPFAASAAAALADTLPRGGELRARALRRLAALAQLALTRLDTDNPTHLKALEQARTVIAEAKAME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00055437;
90% Identity: -
80% Identity: -