Pfla018842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Perizoma flavofasciatum
Gene Symbol
nfxl1
Assembly
GCA_958496245.1
Location
OY292443.1:8284282-8286753[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.014 1.7e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 20 3.1e-07 0.0036 17.7 15.9 3 19 186 202 185 202 0.95
4 20 5.1e-08 0.0006 20.2 13.0 3 19 239 255 237 255 0.91
5 20 2 2.3e+04 -5.0 1.5 6 10 280 284 280 284 0.91
6 20 1.1e-08 0.00013 22.3 11.4 1 19 290 308 290 308 0.99
7 20 9.1e-06 0.11 13.0 18.9 3 19 345 361 337 361 0.86
8 20 1 1.2e+04 -3.1 1.8 5 10 384 389 384 389 0.93
9 20 5.9e-06 0.07 13.6 18.3 1 18 395 412 395 413 0.97
10 20 1.8e-09 2.1e-05 24.8 13.0 1 19 422 440 422 440 0.99
11 20 0.0002 2.4 8.6 6.4 9 19 488 498 486 498 0.89
12 20 0.0021 24 5.4 8.6 1 12 508 518 508 518 0.96
13 20 0.31 3.6e+03 -1.5 3.3 14 19 547 552 547 552 0.85
14 20 0.24 2.8e+03 -1.2 0.1 8 12 568 572 567 574 0.82
15 20 1.9e-05 0.23 11.9 5.1 1 11 588 598 588 599 0.97
16 20 0.32 3.8e+03 -1.6 1.1 14 18 612 616 611 617 0.82
17 20 5.6e-05 0.66 10.4 13.6 1 18 628 645 628 646 0.89
18 20 2 2.3e+04 -6.5 3.4 9 13 652 656 652 656 0.71
19 20 3.6e-05 0.43 11.0 17.2 1 15 687 700 687 706 0.90
20 20 2 2.3e+04 -4.3 1.1 6 10 736 740 736 740 0.93

Sequence Information

Coding Sequence
ATGGCGCGTCGCTACAAAGACGCAGCCGCGAAACTGCAGCAGAACGTGCAGAAACATCTCAAGGATATGAAGGATCTATCTTCTTCTGAAGATGAAGAGCCTTACGAACCCAGCGTCATCGAAGGAATGTTCCAGAGCTATTGGCGCGGAGGTGGTGACACTCAGATGCTCAACAGAACCAAGAATCTTCTAGAAGATGCGATCAGCGGTCGTTCGGTAGCCTGCCTGATCTGCATCAGTTCAATAAAACGAAACCATGCCGTATGGACGTGCGACCATTGTTACTCATACTTCCATCTCTCCTGCATTCAGAAATGGGGGAATGACAGCATAAGTCTGCGCAGTATCGAACCTCAAGCGCCGATAAGTGTTTATAAGCCGCAGAAAATTGAATGGTGCTGCCCAAAGTGCCGTAACTCGTATAGTAAAGACGAAATACCAAGGAAATACCGATGTTTCTGTAGCAAAACTGACAATCCACCTGTCCACCCGTGGTTGATCCCTCATACTTGTGGGGAAGTGTGTGAAAAGAGGCTATCTGCCGGAGAGAACTGTAAACACAAATGTCTTCTTTTATGCCACCCTGGTCCATGCCCCCCTTGTCCACAAACAGTTAATGGAATATGCTACTGTGAAAAAGAACGTAGGAAAGTCAGATGCAGTGCAGCAAAGTGGTCTTGTGGCCAGCAATGTAAGAAAACTCTACTATGTCAGACCCATAAGTGTGAACTCCTATGTCATGATGGGGAATGCCCACCTTGTACTTACACCAGTCTCCAACCATGTCAGTGTGGAGCTGAGAAGTCAAAGAGACCCTGTGATGATCCATTCTGGCACTGCCAAAAGGCTTGCAATAAACCATTTTCATGCGGCTATCATAATTGTGATAAGATATGCCATTCAGGAAGCTGTGAGGAATGCCCTAACTCCGGCATGAAGGCCTGCCCTTGTGGAGCCAACCAGCGGTATGTCCAATGCCCTGATACCATGGAAACTTGCCTTGGAACTTGTGGGAAAAGGCATGAAGACTGTGAACACAGTTGCCCTGAGAAATGCCACAAAGGATCATGCCCTCCTTGCCAAGTCCTAATACAAAAGAATTGTCAATGTAACACTCATACAAGATCACTGCCCTGCAGCAAAGAGTTCAAATGTGAATCTAAATGCAGAGGCACCAGGCAATGTGGAAAGCATGGCTGTGCCAGAAAATGCTGCAATGGAAACTGCCCTCCATGCGAAAAGGCCTGTGATAAGCCATTACAATGTGGTCGCCATAAGTGCACTACAATCTGTCACCTAGGACCTTGCTACCCTTGCCCGTTAGAATCCAAGATAACCTGCAAATGCAAAGAGACTTACATCACTGCCCCATGTGGTCGGGAACGGTTCACCAAACCACCAAAATGCAGTCTCCCATGTAAAGTTAAATACAAATGTGGGCACTCTGAAGAAAATAAGCATTCCTGCCATTTCGGAGACTGCCCACCGTGCAAAGCAATCTGCTACAAAACTTACCCAAAATGCGGCCATGAATGCAAAGCAACGTGCCATGAGTTTAAAGCTGTGGTCTTCAAACAGATTGAAAAACCAGCCACACCCTGGGAAGTGCAGCCTCCTAAGACTAAGATTATGACTTTGGAATGCCCTCCCTGTACTATGCCTGTCTCAGTCATCTGTTTTGGAGAACATGAAACAGAGAACCAACCATGTCACACTGCAACAAGGCGGCCTTGTGGCAGAGAGTGCAGCAAACCTTTGGCTTGTGGAAATCACAACTGTACATTATTATGCCACTTGTATAGCTCAGATCCTGCCTACCCAAATGTGCCTCATAACTGCAAACCTTGCAACAAAGAGTGTGCTAAGCCCCGTCCAAAGAAATGCTCTCATAAATGTTCTATTGAAGCTTGCCATCCGGGACCTTGTCGTCCATGTGAGGTAGTAGAGCGAATCCCATGCCACTGCGGGATCACTGAGTTATACCTTAAATGTAGGGAGTATTGCTCAGCGACAGATGAATTGCTGTCATGCAAACAGCAATGCCCAAAGAACATAGAATGTGGACACCGTTGCAAAAACACCTGCCATCCCGGACCGTGCTGCAATAAAGTCTGcaccaaaaaaacaaagatacaTTGCCCCTGTGGCAACTTAAAGAAAGAGGCTCCGTGCAATGCAGTCAAGAATGGCGAAGCTTACATTCTGTGCAATGAGACATGTGAAGTCAAAAAAGCTGCAGCCAAACTAGAGAGTGAGAAAGAACAACAGAGATTAAAGCACTTAGAAGAGGAGAGGAATAAAAAAGAGCTAGCTGAATACGAGTGGAAACTCAGTGGGAAAAAGAAGAAGTATAAGGAAAAGAAGGTTGTGATAAACAAGGATGAACGGAATTGGGTGCATCGCCACTGGATTCCTGTCCTTGCAGCTTTTGTTGTGATACTGACAGCGGCTTACTATGGTTCTAATTTGTAG
Protein Sequence
MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYEPSVIEGMFQSYWRGGGDTQMLNRTKNLLEDAISGRSVACLICISSIKRNHAVWTCDHCYSYFHLSCIQKWGNDSISLRSIEPQAPISVYKPQKIEWCCPKCRNSYSKDEIPRKYRCFCSKTDNPPVHPWLIPHTCGEVCEKRLSAGENCKHKCLLLCHPGPCPPCPQTVNGICYCEKERRKVRCSAAKWSCGQQCKKTLLCQTHKCELLCHDGECPPCTYTSLQPCQCGAEKSKRPCDDPFWHCQKACNKPFSCGYHNCDKICHSGSCEECPNSGMKACPCGANQRYVQCPDTMETCLGTCGKRHEDCEHSCPEKCHKGSCPPCQVLIQKNCQCNTHTRSLPCSKEFKCESKCRGTRQCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHLGPCYPCPLESKITCKCKETYITAPCGRERFTKPPKCSLPCKVKYKCGHSEENKHSCHFGDCPPCKAICYKTYPKCGHECKATCHEFKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCTMPVSVICFGEHETENQPCHTATRRPCGRECSKPLACGNHNCTLLCHLYSSDPAYPNVPHNCKPCNKECAKPRPKKCSHKCSIEACHPGPCRPCEVVERIPCHCGITELYLKCREYCSATDELLSCKQQCPKNIECGHRCKNTCHPGPCCNKVCTKKTKIHCPCGNLKKEAPCNAVKNGEAYILCNETCEVKKAAAKLESEKEQQRLKHLEEERNKKELAEYEWKLSGKKKKYKEKKVVINKDERNWVHRHWIPVLAAFVVILTAAYYGSNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_01171146;
80% Identity
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