Paff004286.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Perizoma affinitatum
Gene Symbol
nfxl1
Assembly
GCA_961405105.1
Location
OY560187.1:15953869-15956340[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 2.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.065 8.1e+02 0.7 0.4 4 10 169 175 168 175 0.96
3 19 3.1e-07 0.0039 17.7 15.9 3 19 186 202 185 202 0.95
4 19 4.7e-07 0.0058 17.1 11.5 3 19 239 255 237 255 0.91
5 19 0.67 8.4e+03 -2.6 1.9 6 10 280 284 279 284 0.90
6 19 4.1e-09 5.2e-05 23.6 12.1 1 19 290 308 290 308 0.99
7 19 4.2e-06 0.053 14.0 17.4 3 19 345 361 337 361 0.87
8 19 2 2.5e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 19 6.7e-05 0.83 10.2 20.3 1 18 395 412 395 413 0.97
10 19 1.8e-09 2.3e-05 24.8 13.0 1 19 422 440 422 440 0.99
11 19 0.0002 2.6 8.6 6.4 9 19 488 498 486 498 0.89
12 19 0.002 25 5.5 7.5 1 12 508 518 508 518 0.96
13 19 0.35 4.4e+03 -1.7 3.3 14 18 547 551 547 552 0.85
14 19 0.27 3.4e+03 -1.3 0.2 8 12 568 572 567 572 0.77
15 19 1.3e-05 0.16 12.5 5.2 1 11 588 598 588 599 0.97
16 19 9.5e-05 1.2 9.7 13.3 1 18 628 645 628 646 0.88
17 19 2 2.5e+04 -6.1 2.9 9 13 652 656 652 656 0.74
18 19 7.1e-06 0.089 13.3 15.2 1 15 687 700 687 706 0.87
19 19 2 2.5e+04 -4.3 1.1 6 10 736 740 736 740 0.93

Sequence Information

Coding Sequence
ATGGCGCGTCGCTACAAAGACGCAGCCACGAAACTGCAGAAGAACGTGCAAAAACATCTCAAGCATATGGAGGATCTATCTTCCTCTGAAGATGAAGAGCCTTACGAGCCCAGCGTCATCGAAGGAATGTTCCAGAGCTATTGGCGCGGAGGTGGTGAAACTCAGATGCTCAACAGAACCAAGAATATTTTAGAAGAGGCGATCAGCGGCCGTTCGGTAGCCTGTCTCATCTGCATCAGTTCAATAAAACGAAACCATGCCGTGTGGACGTGTGATCACTGTTACGCGAACTTCCATCTCTCCTGCATTCAGAAATGGGGGAATGACAGCATAATTCTACGAATTATCGAATCTGAATCGCCGATAAGTGCTTATAAGCCTGAGAAGATTGAATGGTGCTGCCCAAAGTGCCGTAATTCGTATAGTAAAGACGAAATACCAAGGAAATACCGATGTTTCTGTAGCAAAACTGACAATCCACCTGTCCACCCATGGTTGATCCCTCATTCTTGTGGAGAAGTGTGCGAAAAGAGACTATCTGCTGGAGAGAACTGTAAACACAAATGTCTACTTCTATGTCACCCTGGACCATGCCCCCCTTGTCCACAAACAGTCAACGGAATATGTTACTGTGAAAAAGAATGTAGGAAAGTCAGATGCAGTGCTGCAAAGTGGTCTTGTGGCCAGCAGTGTAAGAAAACTCTGACATGCCAGACCCATAATTGTGAGCTCCTATGTCATGATGGGGAATGCTCACCTTGTACTTACACTAGTCTCCAACCATGTCTGTGTGGAGCTGAGAAGTCAGAGAGACCCTGTGATGATCCATTCTGGCAATGCGAAAAGGTTTGCAATAAACCATATTCATGTGGCTATCATAATTGCGAAAAGATATGCCATTCAGGAAGCTGTAAGGAATGCCCTAAGTCGGGCAAGAAGGCCTGCCCTTGCGGAGCCAATAAGCGGTACATTCAATGCCCTGATACCATGGAACCTTGCCTCGGAACCTGCGGGAAATGGCATGAAGACTGTGTACACAGTTGCCCTGAGAAATGCCACAAAGGATCCTGTCCTCCTTGCCAAGTCCAAACAAAAAAGCAATGCCAATGTTATACTCATACCAGATCCCTGCCCTGCAGCAAAGAGTTCAAATGTGAAACTAAATGCAGAGGCACCAGGCCATGTGGAAAGCATGGCTGTGGCAGAAAATGCTGCAACGGAAACTGCCCTCCATGCGAAAAGACCTGTGATAAGCCATTACAATGTGGTCGCCACAAGTGTACAACAATCTGCCACTTAGGACCTTGCTACCCTTGTCCGTTAGAATCCAAGATAACCTGCAAATGCAAAGAGACTTACATAACTGTCCCGTGTGGTCGGGAACGGTTCACAAAACCACCAAAATGCAGTCTCCCATGCAAAGTTAAATACAAATGTGGGCACTCTGAAGAAAATAAGCATTCCTGCCATTTCGGAGACTGCCCACCATGCAAAGCAATCTGCTACAAAAATTACCCAAAATGTGGCCATGACTGCAAAGCAACATGCCATGAGTTTAAAGCTGTGGTCTTCAAACAGATTGAAAAACCAGCCACACCCTGGGAAGTGCAGCCTCCTAAGGTTAAGATCATGACTTTGGAATGCCCTCCCTGTAACATGCCTGTCTCAGTCATCTGTTTTGGAGAACATGTGACAGAGAACCAACCATGTCACACTGCAGTGAGGCGGCCTTGTGGCAGAGAGTGCAGCAAACCGTTGGCTTGTGGAAATCACAACTGTAAATTATTATGCCACTTGTACAGCTCAGATCCTGCCTACCCAAATGTGCCTCATAACTGCATACCTTGCAACAAAGAGTGTGCTAAGCCCCGTCCAAAGAAATGCTCTCATAAATGTTCTATCAGAGCTTGCCATCCGGGACCTTGCAGTCCTTGTGAGGTGGTAGAGCGATTCCTGTGCCACTGCGGGATCACTAATCTATACCTTAAATGTAGGGAGTATTGCTCAGCTACAGATGAATTGCTGTCATGCAAACAGCAATGCCCAAAGAACATAGAATGTGGACACCGTTGCAAAAACACCTGCCATCCCGGACCATGCTGCAACCAAGTCTGcagcaaaaaaacaaagatacatTGCCCCTGTGGCAACTTAAAGAAGGAGGCTCCTTGCAATGCAGTCAAGAATGGCGAAGCAAACATACTGTGCAATGAGACATGTGAAGTAAAAAAAGCTGCAGCCAAACTAGAGAGAGAGAAAGAACAACAGAGATTAAAGCACTTAGAAGAGGAGAGGAATAAAAAAGAGCTAGCTGAATATCAGTGGAAACTGAGTGGGAAAAAGAAGAAGTACAAGGAAAAGAAGGCTGTAATAAACAAGGATGAACGGAGTTTGGTGCATCGCCATTGGATTCCTGTCCTTACAGCTTTAGTTGTGATATTGACAGCGGCTTACTATGGTTCTAATTTGTAG
Protein Sequence
MARRYKDAATKLQKNVQKHLKHMEDLSSSEDEEPYEPSVIEGMFQSYWRGGGETQMLNRTKNILEEAISGRSVACLICISSIKRNHAVWTCDHCYANFHLSCIQKWGNDSIILRIIESESPISAYKPEKIEWCCPKCRNSYSKDEIPRKYRCFCSKTDNPPVHPWLIPHSCGEVCEKRLSAGENCKHKCLLLCHPGPCPPCPQTVNGICYCEKECRKVRCSAAKWSCGQQCKKTLTCQTHNCELLCHDGECSPCTYTSLQPCLCGAEKSERPCDDPFWQCEKVCNKPYSCGYHNCEKICHSGSCKECPKSGKKACPCGANKRYIQCPDTMEPCLGTCGKWHEDCVHSCPEKCHKGSCPPCQVQTKKQCQCYTHTRSLPCSKEFKCETKCRGTRPCGKHGCGRKCCNGNCPPCEKTCDKPLQCGRHKCTTICHLGPCYPCPLESKITCKCKETYITVPCGRERFTKPPKCSLPCKVKYKCGHSEENKHSCHFGDCPPCKAICYKNYPKCGHDCKATCHEFKAVVFKQIEKPATPWEVQPPKVKIMTLECPPCNMPVSVICFGEHVTENQPCHTAVRRPCGRECSKPLACGNHNCKLLCHLYSSDPAYPNVPHNCIPCNKECAKPRPKKCSHKCSIRACHPGPCSPCEVVERFLCHCGITNLYLKCREYCSATDELLSCKQQCPKNIECGHRCKNTCHPGPCCNQVCSKKTKIHCPCGNLKKEAPCNAVKNGEANILCNETCEVKKAAAKLEREKEQQRLKHLEEERNKKELAEYQWKLSGKKKKYKEKKAVINKDERSLVHRHWIPVLTALVVILTAAYYGSNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_01172012;
80% Identity
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