Basic Information

Insect: Perizoma flavofasciatum
Gene Symbol: -
Assembly: GCA_958496245.1
Location: OY292423.1:12508125-12517095[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.034 2.1 9.4 4.6 1 23 201 224 201 224 0.93

2 30 0.0007 0.043 14.7 0.5 3 22 257 276 255 276 0.93

3 30 0.00022 0.014 16.2 0.3 2 23 311 333 311 333 0.97

4 30 0.00062 0.038 14.8 0.8 1 23 381 404 381 404 0.95

5 30 0.82 50 5.0 0.6 1 23 426 448 426 448 0.95

6 30 0.0046 0.28 12.1 3.0 2 23 497 518 496 518 0.96

7 30 0.00023 0.014 16.2 2.0 2 23 564 586 564 586 0.97

8 30 6.8e-06 0.00042 21.0 1.3 1 23 636 659 636 659 0.97

9 30 0.00057 0.035 14.9 0.1 1 23 714 736 714 736 0.97

10 30 0.0016 0.1 13.5 6.6 1 23 747 769 747 769 0.97

11 30 0.071 4.3 8.3 1.1 2 23 781 802 780 802 0.96

12 30 0.0048 0.3 12.0 0.9 1 23 812 834 812 834 0.98

13 30 1.6 96 4.1 5.8 1 21 863 883 863 885 0.86

14 30 0.006 0.37 11.7 7.8 1 23 896 918 896 918 0.98

15 30 0.0036 0.22 12.4 1.2 1 23 926 948 926 948 0.96

16 30 0.00029 0.018 15.8 0.2 2 23 968 990 967 990 0.97

17 30 0.016 0.99 10.4 2.4 1 23 1008 1030 1008 1030 0.97

18 30 0.32 20 6.3 0.8 2 23 1071 1093 1070 1093 0.92

19 30 0.004 0.25 12.3 0.2 2 23 1116 1137 1115 1137 0.95

20 30 0.4 24 6.0 0.3 2 20 1141 1159 1140 1160 0.92

21 30 0.14 8.7 7.4 1.6 2 23 1180 1202 1179 1202 0.96

22 30 0.043 2.7 9.0 0.6 2 23 1218 1239 1217 1239 0.91

23 30 0.43 27 5.9 2.7 5 23 1249 1267 1247 1267 0.90

24 30 0.0075 0.46 11.4 0.8 2 23 1278 1300 1277 1300 0.95

25 30 5.9 3.6e+02 2.3 6.2 2 23 1317 1335 1317 1335 0.86

26 30 1.5 93 4.2 2.1 2 21 1339 1358 1338 1359 0.93

27 30 0.51 31 5.7 2.9 2 23 1407 1428 1406 1428 0.93

28 30 0.0042 0.26 12.2 0.3 2 23 1439 1461 1438 1461 0.97

29 30 1.9 1.2e+02 3.8 0.6 2 23 1477 1495 1477 1495 0.79

30 30 0.12 7.2 7.7 4.1 2 21 1499 1518 1498 1519 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.034	2.1	9.4	4.6	1	23	201	224	201	224	0.93
2	30	0.0007	0.043	14.7	0.5	3	22	257	276	255	276	0.93
3	30	0.00022	0.014	16.2	0.3	2	23	311	333	311	333	0.97
4	30	0.00062	0.038	14.8	0.8	1	23	381	404	381	404	0.95
5	30	0.82	50	5.0	0.6	1	23	426	448	426	448	0.95
6	30	0.0046	0.28	12.1	3.0	2	23	497	518	496	518	0.96
7	30	0.00023	0.014	16.2	2.0	2	23	564	586	564	586	0.97
8	30	6.8e-06	0.00042	21.0	1.3	1	23	636	659	636	659	0.97
9	30	0.00057	0.035	14.9	0.1	1	23	714	736	714	736	0.97
10	30	0.0016	0.1	13.5	6.6	1	23	747	769	747	769	0.97
11	30	0.071	4.3	8.3	1.1	2	23	781	802	780	802	0.96
12	30	0.0048	0.3	12.0	0.9	1	23	812	834	812	834	0.98
13	30	1.6	96	4.1	5.8	1	21	863	883	863	885	0.86
14	30	0.006	0.37	11.7	7.8	1	23	896	918	896	918	0.98
15	30	0.0036	0.22	12.4	1.2	1	23	926	948	926	948	0.96
16	30	0.00029	0.018	15.8	0.2	2	23	968	990	967	990	0.97
17	30	0.016	0.99	10.4	2.4	1	23	1008	1030	1008	1030	0.97
18	30	0.32	20	6.3	0.8	2	23	1071	1093	1070	1093	0.92
19	30	0.004	0.25	12.3	0.2	2	23	1116	1137	1115	1137	0.95
20	30	0.4	24	6.0	0.3	2	20	1141	1159	1140	1160	0.92
21	30	0.14	8.7	7.4	1.6	2	23	1180	1202	1179	1202	0.96
22	30	0.043	2.7	9.0	0.6	2	23	1218	1239	1217	1239	0.91
23	30	0.43	27	5.9	2.7	5	23	1249	1267	1247	1267	0.90
24	30	0.0075	0.46	11.4	0.8	2	23	1278	1300	1277	1300	0.95
25	30	5.9	3.6e+02	2.3	6.2	2	23	1317	1335	1317	1335	0.86
26	30	1.5	93	4.2	2.1	2	21	1339	1358	1338	1359	0.93
27	30	0.51	31	5.7	2.9	2	23	1407	1428	1406	1428	0.93
28	30	0.0042	0.26	12.2	0.3	2	23	1439	1461	1438	1461	0.97
29	30	1.9	1.2e+02	3.8	0.6	2	23	1477	1495	1477	1495	0.79
30	30	0.12	7.2	7.7	4.1	2	21	1499	1518	1498	1519	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTCTGCCTCAAGCTCGGGGACTTCTACTCCATCTTCGCGGCGGATAATGATATCCAGCTGTCCGAGATGGTTATGGAATGTTCCAGGATAAAGGTGTATGATGGAGATGGACTACCAGATAAAGTATGCTCAGAATGCATACAGAAACTCAGCAGCGCCTACATATTCAAGCAGCAGTGTGAGAGGTCCGACCAGGAGCTGCGGCGGAACTACGTCCCGCCTCCAGGCTTCAGCATCAGCCCACCGCCAGCAACACCAACTAACCGACAAAGCAGCGATTCCGCCTTCTCTACTCACACAGACAGCTCAAACCTAAAGTCATCATCATTCACTGAAAACAAAGTTACACCAGTCAGCAGGAACAGAAAGAGAAGTGCCGAAAGCGACAATGCTTCCGTCGGCAGCCGGTCCCAGGAATACAGCAGACCCAGCAGCTCCAAGCGGGTGGAGGAACTCAGAAAATCTCAAAAAACAAAACGCTCGCGATACTCCGCTGATTCCGATTACGAAGATAACGAAGCATCTAGCTTCGTAAATGAAACTGACTCAGATGAACCACTCCTCAAAAATGAACACACCTGCCCTCACTGCCCTAAGACTTTCAAATGGCTGAAGAGTATGAAGATACATATGGCTCATATGCACACGGGGAAGAAGGCCAGCTCGAGAGCTCCAGGGTTCGCCGTGAACATTCCGATACAAAGCGTTGAAACAATCGAAAGCGATGACGATCAGGTAAACTGCGACAAATGTGGCAAGAATTTCAAACTAAAGATTATGCTGAAGCGTCATCAGGAGACATGCCAGAAGTCACCAGCTAAACCCCCTCCGAAATCGCCAATGAAGGAGTTGGTGATAACTCTAGAGCCTATAGACGCCGTGCCGCAACGCGCGAAGAAACCGACATGCGAATACTGTACGGCGCAGTTTAAAACCGTCGAAAACTTAGAGAAACATCTCAGAGTGGTTCACGCTGCGACACGCAAAAAAGATAAAGTAGAAAACGAACCTATTGGACCTCTAATATGCATCTATTGCAGTAAAGATTTCGAAGATTACTATGTGTACAGCTCGCATTTCAACGGGTGCCCAATGAAAGAGAATCTGTCGTTGTTTCAATGTCCCATGTGTCCGAAGCAATGCACTCGAGCCAGTGCCTACGTGAGCCACGTGAAGGGTTCTCACTACTTCGGCTCTAGTCCTAAAGTGGAGATAACTTCACCTGATCAGAGTCAGGTAGGTCAGGCGTTCGAATGCCGCATGTGTTGTAAGAAGTTGGCCACACAAGCGCTGCTGATCACGCACTTGGCCGCGCACATGTCTAATATTGACGAAGATGACAACGCAACTGCTGATGATTTTGATTCAAGAGATGACACTGTAGCTGATGATTCAATGTCAGTTCAGTCAGCGCAAAGTTCACAAGTCTCGCAAGGCTCGCAGTCCCATTCGGGTTCCCAAAAATGTCGCTTCTGTGACAAAGAGttcaaatacaaaaaatccCTATTATCACACGAGCTAAAACATACCGAAGAAAACGTGCGTATTAAAAACGAACCTCCTGATAAACCAGTACATGCAGACTTACTCACAGAAACAAACCAGGATTTTGCCAAAGAGTTCGACTCGGAATCTAGTCAAGACGAAGGGGAAGAAGACAATACGTGCGATATTTGCGAGAAGCAATTTTCTTACAAACGGCTGCTGATACAACACAAGCGCACGAAACATACCATGGTAGCTGGCATGAAACGAGCTAAAATAAGCCTTAAAGACTGCTCTGTAAGGTGTCTGATATGTGAGGAGGAGATGAAAGTAAGCGCTATCAATGAGCACAACCAGAAGCATATCTCAGTGAATATACGGCCGAGGAATATTTACACGTGCGCTGAGTGTGGGCAGAAATTTAAGAGCTGCAGCAACCTGGCCAATCACATCAAACTGGTTCACAGgttgaAACAATTAGAAGTGCCGAAGCAGTTTGCTGGCGTGGACATGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGATGAATCCCAGAGTCACAACGGCTTTGGagagGTTCCGCTGAAAGCAGCGCCGTCGGTAAACCTTACCGGGTTCACGTGTCCCATCTGTGGGAAGAAGATGCCCACTCTCATATCGCTCAAACGTCACGTCAACTGGCACTCGTTTGTTGGAAACAATTTGGAATCGAAGCATGAGTGTTTCGTCTGTAAAGAGACCTTCAAATTCAAAGGGCACTTCAAGATTCACATGCGTCAGCACTACAACGATACCAACCTCGACCCCGCCCTGCTCACCTGCTCCATCTGTCAGCGCAAGAGCAAGCATCTACGCGCGGCGCAGGCACACATGAACTGGCACAAACAAACTCGCTTCCAGACCAAAGACTACCAGTGCTCCATCTGCAAACGGGTCTTCCAGTACCGACGCGTCTACCTCTCACACATGGCCATACATTACAAGAAAGGAGAAAGCGGACAGAATACCATAGTCGGGGATATGGTCTCGAATAATCAAGACCGCGTCATGTTTGACGGAACTTTCACCTGCCACCTTTGCGGTAAAGTATGTGATTCAGAGAATTCCCTAAAATGCCACTCCAGTTGGCACAAATCAAAGACGCTGCTGTACGGAGCGCGCCACGAATGCCAGATGTGCCATCTCCAGTTCACCAATAAGCGGCACCTGGAGCTCCATACTCGCTCGCATTACGAAGATCCGAATGGTGAGTTCAAATGCAATGTATGCGGCAAAGGATTCATAGACGAGGAATATCACAGACGACACGTGAAGGGACATAACTTCGACCACCAGTCTCACAAGAAGAGGATTGAAAACCTGCGAAAGGGTAAAGTTAAATGTCCCATCTGTAACCGGTACTACCCTGATCTAGTGAAACTTATCCGGCACCTGCGACGAACACATCCGGAGAGCAAGATGATTAAAGAGGATCCCGACGCACCTCCGCAGAAGTATTACTCCTGCAAGCTCTGCGCCAAGTCGTTCTACGACGAGAAACGATTCAAAAGGCACGAGGAGTCGCATCTACGTAAGCCCAGCTTCCTCAAATGCAAATTCTGCGGACATAAAACCTCCTCCATGAAAGCTCACAACATTCACATTAAAACTAAGCATATGACAAAGAAGTATGTGGAGAATCCTTTGAAATGTACGCAATGTGATGAGGTTTTCATATGGGGGTACGCTTTGCATCATCACTTGCGTGATGTTCACGGGATTAACGAAGAGTGGATCGCCGAGCGGACCGAGGCGACGCTAGAAGGCCCGCTGAAGGACCTACAATGCTCGGTGTGCCTCAAGGTCCTTGCGAGTAAAGGCAACTTCGAGCGTCATATCGATTACCACAACACCCTGCGTTGTAACTACTGCTTCGAATACTTCAGCACGCTACGTTTCCTCGAAGGCCACCTTGCTTTTACCTGTGACAAAAAGAAATTGATTGGCGAGGCCGATCCGCACCCGAAGCGAGTCAAATGCGAAATATGTTACAAAGCGTTTAGCTTGCAAGTCAAGTTAGACTGTCATCTCAGAACTCAGCACAGTATAAAAGTGAATAGAGAACAGGGCGCTGGCAAACAAGAGCTCGTTTGCGATTATTGCTTCAAAGTGTTCGAGAACGAACATGCGCTGAGCGGACACAAAGTGTACCATCGAACCATCGGATACTTCGGCTGCATTTACTGTCCGAGGAAATTCAACACTCAGACAGCTTACAGGAAGCACAAAGTTCACCATTTGTATACACATAACGTCGAGAACCCGACCAAATGCGAGCATTGCGACGAGACATTCATCCTGTTCAAAGAAATGATAGACCACATGAGGGACGTTCACGGCGACGACAAAGAATGGATCGTCATGCCGAAAGATTCCATCGAAGAGACGTGCACAATCTGTCACAAAACATTTTTCAATCTGCACAAGCACTTGGACTATCATGAGGAGAACAAGTGCAAGAAATGTCAGGAATATTTCTTCTCGAGCGTAGATTTCGATAACCATCTATGCGCCATCGAGAGCGATAGCGAAGAAACCGCGGGCGTCGTGAACCCTGGCATGCCATACGAGGAGTGCACATTCTGCTTCAAACCAATCACTAAGAAAGACTCCAAGAAGAAACATGACATTTTACATCGCACTTCGGGAGCGATATCGTGTCGATTCTGCCATCTGAAGTTCAAAACGCTTGATGCGTTCAATATACACTCGTTTTCTCACCGTAGCAGAAAATACAACAAGAAGCCGATTAAATGCCGCGTATGCAAGGAGCGCTTCGTCAAGTATGGTCCGTTCATAAAACACATGAGAGTAGTGCATAAATGCATGAAGAAAATCCACTACCGCGCCCTTGTTAAGCCGGAACGTTGCGTGATCTGCGGCGAGGAGTTCCCGAACTTGCATAACCACTACCGCGCGCACTTGGCCAATCAGTGTCAGTTCTGCTCGAAGTACTTCACCTCCTCAAAGCTCTTTGCTAAACACCAGTGCAATGTTATCGACCAGGACCCCACGAAAATATTTACTTCGGACGAAAACTTGAGTGCGCTGATCAACTCGTACACTCCGAGGTACTTGAAAGATGAAGAGAAGTTTTACGGCTACACAGATGATGATGAGGAAGTTGAGACGGATTTACCTCCCGCGTTGACTCAGACTCAAGATCAAAAAGTTCAAAAGGCTATGAACGGTCCGTCGAAAAGACCGAAGCCAGAGCAAGACAGCCAAGAGGCCGAATACGAGAGAAACCTGCACATGATGGTACAGTCACCGATAATATCCGACGTATTATCGCTGTTTCAAACTGAGGAGGAAACTCAAAATGACAAGACACAGAGATTCCTAGGGGAGATTGTCAGTCTgaccgatgatgatgattctatGGACATGAACGATGTTTTAGCGCCCATTGTTGTAATTGATGATTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFAADNDIQLSEMVMECSRIKVYDGDGLPDKVCSECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPATPTNRQSSDSAFSTHTDSSNLKSSSFTENKVTPVSRNRKRSAESDNASVGSRSQEYSRPSSSKRVEELRKSQKTKRSRYSADSDYEDNEASSFVNETDSDEPLLKNEHTCPHCPKTFKWLKSMKIHMAHMHTGKKASSRAPGFAVNIPIQSVETIESDDDQVNCDKCGKNFKLKIMLKRHQETCQKSPAKPPPKSPMKELVITLEPIDAVPQRAKKPTCEYCTAQFKTVENLEKHLRVVHAATRKKDKVENEPIGPLICIYCSKDFEDYYVYSSHFNGCPMKENLSLFQCPMCPKQCTRASAYVSHVKGSHYFGSSPKVEITSPDQSQVGQAFECRMCCKKLATQALLITHLAAHMSNIDEDDNATADDFDSRDDTVADDSMSVQSAQSSQVSQGSQSHSGSQKCRFCDKEFKYKKSLLSHELKHTEENVRIKNEPPDKPVHADLLTETNQDFAKEFDSESSQDEGEEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSAINEHNQKHISVNIRPRNIYTCAECGQKFKSCSNLANHIKLVHRLKQLEVPKQFAGVDMADFCEVVVTKAEPLDESQSHNGFGEVPLKAAPSVNLTGFTCPICGKKMPTLISLKRHVNWHSFVGNNLESKHECFVCKETFKFKGHFKIHMRQHYNDTNLDPALLTCSICQRKSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRRVYLSHMAIHYKKGESGQNTIVGDMVSNNQDRVMFDGTFTCHLCGKVCDSENSLKCHSSWHKSKTLLYGARHECQMCHLQFTNKRHLELHTRSHYEDPNGEFKCNVCGKGFIDEEYHRRHVKGHNFDHQSHKKRIENLRKGKVKCPICNRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPQKYYSCKLCAKSFYDEKRFKRHEESHLRKPSFLKCKFCGHKTSSMKAHNIHIKTKHMTKKYVENPLKCTQCDEVFIWGYALHHHLRDVHGINEEWIAERTEATLEGPLKDLQCSVCLKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLEGHLAFTCDKKKLIGEADPHPKRVKCEICYKAFSLQVKLDCHLRTQHSIKVNREQGAGKQELVCDYCFKVFENEHALSGHKVYHRTIGYFGCIYCPRKFNTQTAYRKHKVHHLYTHNVENPTKCEHCDETFILFKEMIDHMRDVHGDDKEWIVMPKDSIEETCTICHKTFFNLHKHLDYHEENKCKKCQEYFFSSVDFDNHLCAIESDSEETAGVVNPGMPYEECTFCFKPITKKDSKKKHDILHRTSGAISCRFCHLKFKTLDAFNIHSFSHRSRKYNKKPIKCRVCKERFVKYGPFIKHMRVVHKCMKKIHYRALVKPERCVICGEEFPNLHNHYRAHLANQCQFCSKYFTSSKLFAKHQCNVIDQDPTKIFTSDENLSALINSYTPRYLKDEEKFYGYTDDDEEVETDLPPALTQTQDQKVQKAMNGPSKRPKPEQDSQEAEYERNLHMMVQSPIISDVLSLFQTEEETQNDKTQRFLGEIVSLTDDDDSMDMNDVLAPIVVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170802;
90% Identity: iTF_01170802;
80% Identity: -