Basic Information

Insect: Perizoma flavofasciatum
Gene Symbol: -
Assembly: GCA_958496245.1
Location: OY292448.1:3838793-3859949[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.16 9.6 7.3 0.6 3 23 330 350 329 350 0.97

2 28 0.013 0.81 10.6 3.5 1 23 356 379 356 379 0.95

3 28 8.3e-05 0.0051 17.6 2.2 1 23 383 405 383 405 0.96

4 28 0.00082 0.05 14.4 1.9 1 23 411 434 411 434 0.93

5 28 0.019 1.1 10.2 0.3 1 23 439 462 439 462 0.96

6 28 0.00019 0.012 16.4 2.3 1 23 468 490 468 490 0.97

7 28 0.026 1.6 9.7 4.2 1 23 496 518 496 518 0.94

8 28 0.0064 0.39 11.6 0.9 1 23 524 546 524 546 0.98

9 28 0.0001 0.0062 17.3 1.9 1 23 553 575 553 575 0.98

10 28 0.0003 0.018 15.8 2.4 1 23 581 603 581 603 0.97

11 28 0.015 0.93 10.5 2.4 1 23 609 631 609 631 0.97

12 28 0.00021 0.013 16.3 3.3 1 23 637 659 637 659 0.98

13 28 0.015 0.89 10.5 2.7 1 23 664 686 664 686 0.97

14 28 1.6e-06 9.6e-05 23.0 2.5 1 23 692 714 692 714 0.98

15 28 0.0069 0.42 11.5 1.1 1 23 720 743 720 743 0.95

16 28 0.74 45 5.1 3.7 1 23 749 771 749 771 0.97

17 28 0.00017 0.011 16.6 3.7 1 23 777 799 777 799 0.98

18 28 0.014 0.85 10.6 0.4 1 19 803 821 803 826 0.92

19 28 0.088 5.4 8.1 0.1 1 23 832 854 832 854 0.97

20 28 0.0013 0.08 13.8 0.5 1 21 860 880 860 881 0.95

21 28 0.0017 0.1 13.5 4.1 1 23 1081 1103 1081 1103 0.98

22 28 0.058 3.6 8.6 0.8 1 21 1109 1129 1109 1130 0.95

23 28 8.9e-05 0.0054 17.5 1.2 2 23 1133 1154 1132 1154 0.96

24 28 4.5e-07 2.7e-05 24.7 1.2 1 23 1160 1182 1160 1182 0.98

25 28 0.0002 0.013 16.3 3.3 1 23 1188 1210 1188 1210 0.97

26 28 0.012 0.74 10.8 0.4 2 23 1241 1261 1240 1261 0.97

27 28 0.00046 0.028 15.2 1.2 1 23 1267 1290 1267 1290 0.96

28 28 0.0033 0.2 12.6 0.7 1 23 1296 1318 1296 1318 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.16	9.6	7.3	0.6	3	23	330	350	329	350	0.97
2	28	0.013	0.81	10.6	3.5	1	23	356	379	356	379	0.95
3	28	8.3e-05	0.0051	17.6	2.2	1	23	383	405	383	405	0.96
4	28	0.00082	0.05	14.4	1.9	1	23	411	434	411	434	0.93
5	28	0.019	1.1	10.2	0.3	1	23	439	462	439	462	0.96
6	28	0.00019	0.012	16.4	2.3	1	23	468	490	468	490	0.97
7	28	0.026	1.6	9.7	4.2	1	23	496	518	496	518	0.94
8	28	0.0064	0.39	11.6	0.9	1	23	524	546	524	546	0.98
9	28	0.0001	0.0062	17.3	1.9	1	23	553	575	553	575	0.98
10	28	0.0003	0.018	15.8	2.4	1	23	581	603	581	603	0.97
11	28	0.015	0.93	10.5	2.4	1	23	609	631	609	631	0.97
12	28	0.00021	0.013	16.3	3.3	1	23	637	659	637	659	0.98
13	28	0.015	0.89	10.5	2.7	1	23	664	686	664	686	0.97
14	28	1.6e-06	9.6e-05	23.0	2.5	1	23	692	714	692	714	0.98
15	28	0.0069	0.42	11.5	1.1	1	23	720	743	720	743	0.95
16	28	0.74	45	5.1	3.7	1	23	749	771	749	771	0.97
17	28	0.00017	0.011	16.6	3.7	1	23	777	799	777	799	0.98
18	28	0.014	0.85	10.6	0.4	1	19	803	821	803	826	0.92
19	28	0.088	5.4	8.1	0.1	1	23	832	854	832	854	0.97
20	28	0.0013	0.08	13.8	0.5	1	21	860	880	860	881	0.95
21	28	0.0017	0.1	13.5	4.1	1	23	1081	1103	1081	1103	0.98
22	28	0.058	3.6	8.6	0.8	1	21	1109	1129	1109	1130	0.95
23	28	8.9e-05	0.0054	17.5	1.2	2	23	1133	1154	1132	1154	0.96
24	28	4.5e-07	2.7e-05	24.7	1.2	1	23	1160	1182	1160	1182	0.98
25	28	0.0002	0.013	16.3	3.3	1	23	1188	1210	1188	1210	0.97
26	28	0.012	0.74	10.8	0.4	2	23	1241	1261	1240	1261	0.97
27	28	0.00046	0.028	15.2	1.2	1	23	1267	1290	1267	1290	0.96
28	28	0.0033	0.2	12.6	0.7	1	23	1296	1318	1296	1318	0.98

Sequence Information

Coding Sequence: ATGTGCTTATCCGTTAATGTGAAAATTCAATCAATTCAAAATTCTCCACTGCAAGATATCTTTGAAAAACTTGCGAGTTGCAAGctcTCTTCAGAAGATGGTAGACCGGACACAGTCTGCTACATCTGTCTCTCTCAGTTACAGAGATTCTACAAGTTTCGGGACAAATCTCGGAAATCGGGAGATATCCTCTCGGAACTATCACGTGATGGCATTGAGATTTCCTCAGAGACGGTGTCTGTGCTGAATAAAGAAGTACGGCTTAGTTTCCTCGCATCCCCCGTCGAATCAGTATGGTTCTCCAGTGAAATCACTCAAGTGCTTGTCAAAGAAGAACCAGACAGCATagaagatgaaataaaaattactccCAAGGCGAATGAAGCTGTAAAAGTGAAATTGGAAGCAGCCGTGTGTAGAGTTTGTTTGTCGGGTGATCTCGGAACTCGGAGCATCAAGAACACACTACTCCAAGTGATCTATGAACAAATGACTGGTACcatgtgggaatcgaagccgcaccttGCGTCCGGCTACTCTGCCGCCGTGACACTGAGGTCCACAATGCTACTGTTTCAGCTGATCGCACAGGATGGCAGACCTGAGGATCTTTGCTATATCTGCCTCGCGCAGTTGCATAGATGGAGGCGGCTCATCCGAACTACCAACAAATCGGAAAATATCCTGACGGAAATTCTCCATAGCGGTGCCCAGttaacGCAATCATCTCTTCTCAACCGGAGACCCAAATCTGACTACTCGATAACCACATTGGACCCCATAACTTTCTGCGCGGAATACGAGGTGAAACTGGAAATAGTTGATGTGAAGGAGGAATTTATAGAAATTGACCTGCCCATGCAAGATGGAGTTGAAGGTCCACCAGTTCTCGGACAGAACCAGATCAAAGTAGAGCTGGAACAAGAAACGAAACCTGACTTCAAAGAAACTGACAGGAACATCAATAACTCAAATCTCCTTGAGGCTTGTGACGTTTGCAACTTCAAAAGCGACTCCGAAATCAAGTTAAAGAAACATCTACGTTTGCACGATCCGAAAAGAAAATTCCCATGCGACCTCTGCACACACAGATTCATCTCGTCCAACCATTTGAACAATCACAAGGAAAGTCTACACAGATTTAAGCACGAATGTACCCATTGCGATCAAGTATTCACAGCTCCGAGTCAACTAAAAAGGCACTCTTTGATCCACACAACAAAACAGATTTACTCATGTGAGAAATGCAATAAGATATTCGATAAGGAGAAGAATTTACGCAGTCATTATTATAATGTACATCCTGGCGAGAGGTATTATTGTGATCGGTGTGATTATACAGCTACGAGCAATCAGTGGTTACAGGATCATGTGTTAAAAGTCCACGGGGACAGTCCAAGCTTTGTGTGTGATGTGTGTCATAAAACTCTCTCTCTTAAAAGCAGTTTGAAACGGCATTTACTGAATCACGTTACGAAGAAAGCATATGAATGCAAGATTTGCTTCAAAACTTTCAGCACAAGCCAAAACTGCAGAGTTCATAATATGCTACACACCGGTGAAAAGCCCTACACTTGCGACATATGCAAGAAAGGTTTCAGAGAGAAGCAACGTTGGAAACTGCACGCACTCACACATAACAATGGAAAAAAGCCGTTCTCATGCAACATATGCGAGAAAGAGTTCTACAGGAAGGATGTATTCAAGAAGCATATGACTATACACTATGCGCAGAAGATTTATGCGTGTCATCTATGCGATTTGAAATTCAGTAGCAGTACGTATGTAAAGAAACATATGATCAGTCATTCAGACGAGAGGCCGTACTCGTGTGAAGTATGCCAGAAGCGGTTTAAAGCGAGCGCAACTCTGAAATGTCATATGACAGTACATAATGGTGAGAAAACTTTCACATGTGATCTGTGCAAGAAGTCTTTTACAAAAAAGCAATATTTGTTAGGGCACATGAAATATCATAATATGAGACCGTTCGCTTGCAGTATTTGCGATAAACGTTTTCATACGAGACAGATATTGCTATTGCATACAAGAACTCATACGGGGGAGAAGCCTTACTCGTGTGTCAGTTGCGATAGGACTTTCACTCAGAAGAGCTCGTTGAGACGTCACTTAAGATCTCACTCCGGTGAAACGCCGTATGCATGCGACATTTGCAACAAACACTTCGCCGAGAAGCTATCATTGTTCACGCACAAAATCAGCGTTCACTCGAACATCAATAAATATATCTGCGATTTATGCTATAAAGTGTGCGTTGATAGAACGAAAATCATTCACcatttgaaatttcataatgCAAAAAAACCGTTTACTTGCAACATATGCCAGAAAGCGTTCTTCAAACTGAGCACTCTTACACATCATGTTAAGATGCATGTAGGGGAGTATCGCTGTGCGTTTTGTGATGTGAAATTTGAATCGAAGACTAATCTGGACAGACATAATGTGGCAGTACATGGAGCTGTCAAACAATACGCATGCAACAGATGCGAGTTACCTTTCGACGGGCTGATTCGACTGAATAGTCATATGAGGTTACACACAGGTGAAAAACAATTCGCCTGTGAGTTATGCGAGAAAACGTACGTTGAAAAGAGAGATTTACAGCATCACATGAAGCTTATCACAGATAATGTTACACCTAACACAATTTGCTATGTCTGCAATGCACTGTTGCAGAAGTTCTGTGATTTCTTCGACATGTCACAGAAAGCTGAACAGATCCTCACGAAGAGACTTCTTGAGGGTATTGAGATTATTCAAGAGAAAAAAGACAAGATGAACATACTCAATCTATCAATGACTGCGACACAGGCCATGTCCTTTATTGATGATGGGACGGAGGAAGAGCCTGAAGTCACTGTTACTGTTAAAGAAGAACCAGTAGAACATGATGAGTGGGAACAGTTCAAAGATGATTTTATAGattcAGGAGTCGAAATACTACACAACGGCGATACGGCTAACGAATCCTTACCAAAATGCACATCTAAAGAACCCAATACACCAAACTGGTCTGCTTTCCAAAGCATGGAGCATAATCAGAACGAAATATGCATAAAAACGGAAGCCCCTGAAACAAACAATGAAGAAAATACCCAAAATGATAAACACACTCTCGACTTTCAAAACTTTTGCAAAGCTCTCAATATATTTCCTCTGAAGCCAGACTTTCAATATCGCCCTGACATCAATAAAGGTAGAAAGAACGAATCTAGTCATACCTGCAGCATATGCAATTACACATGCCCCCTCGCTAAAACTTTAAGAAGACATATGAAAGTCCATGATCTGAACAACCAATACTCATGTGAACTCTGCCTATACCGATTCAAAGATGAGAAAAAGCTAGCGTCACATAGAAACCGCTGTACCGTCTGCAGTTATTGTGGCAAGAACTTCAAAAACGTACACGGCCTTAGGATACATGTGAGATTGCACACCGGGGAGCAACCGTTCTCCTGCGATTACTGTGGCCGAGGATTCAACCAGAAAACAAACCTACAAACTCATTTAAGAGTTCACGCTAGACACAAAAAGTTCCCTTGTGATATGTGCCATAAGACTTTCCCATTCAATTCTTTTTTGAAACGGCACAAGTTGATACACGAAACTAATCCGCTAGACTTTGAGAGTATGAATCGGATTGTAAATTGTCATAAACTCTACAGACGTAAGAAGAGCTCGGAGAGTCTGAGCACATGTAGCGTTTGTGGAAAGATTCTTCAAAGCAAGGGTCTGAATATGCACATGAGACTACACTCGGGAGAACTTCCCTTTAGCTGTGAGCGATGCGGTAGAGGCTTCAACCAAAAATGCAATTTACTAGTTCACGTAGAAAGAGTACATACGGGAGATGAAATGTTTACGTGTCAAGTGTGTTTTATTGTGTTTCCACTTACTTCGGAGTTGAAACGACATTTCTTAACACACAGAAATGTAAAATTGGAGATTAAAAGCGAATTTTTACACGAGCTAGGGTTAAAAGTAAAGCGCGAATTTGATTTGTTGAGTTACACTGAATGGAATGTAGCGTTAAAACGCGATTCGTTAAATGACACTGAACGGGATGTTGAGTTACAACGTGATCTGTTAACTCACATTAACGGAAATACCGAGTCAAAATGCGATTTATCAAGTCAGACTGAAAATAATCTCGAGATAAAACGTGATTTACCAACTAACACTGAAAATAATCCAGAGTTACCTGGTACTAAAGAGAATATAGAGACTGACACTAAAGATAATCATGAGTTGACTAACAATGAAGAGAACCTAGAGTTTACTGAGACTGTAGATAATATAGAGTTTACTGTCATTGAAGTAAATCCAGAATTAACCGACACTGAAGATAGTCTTGAGTTAAATAATGCTCAAGATAATTTACAGTCAGTGAAAACTGGAGAGAATCCAGATATAACTGATACTAAAGAGAATATAGAGACTTACACTGAAGATAATGATGAATTAACTGACACTAAAATAATGAATACTCAAGAGAATCTAGAGTTTGCTGAAACCGTAGATAATGTAGACTTAACTGTCACCGAAGTGAATCTAGAATTACATGACACTAAAGAGAGCCACGTGTTATCTAAAGAGCATCCAGAGTTGACTGACATTGAAGAGAAAAAGTTAACTGATATTGAAGAGAATCTAGAGTTAACTGACAGAGAAGAGAATAAGTTAACTGATTTTGAAGATAATCTAGAGTTGACTAATAGAGAAGTGAATGAGTTAACTGATATTGAAGAGAATCTAGAGTTGACTGCCAGAGAAGAGAATGAGTTAACTGATATTGAAGAGAATCTAGAGTTGACTGACAGAGAAGAGAATAAGTTAACTGATACTGAAGAGAATCTAGAGTTGACTGACAAAGAAGATAATGAGTTAATTGATATTGAAGTGAATCTAGAGTTGAATGACAGAGAAGAGAATGAGTTACCTGATATTGACGAGAATCTAGAGTTAAATGGCACTAAATGGAATCAAGGCATAAAACGCGATTGGTCAGCTTATACTGAAGATTATCTTGAGTTAGAACGCGATTTGTTAAGTCGCTCTAAAAAGGATCGACAGTCAGAACGCGATTTGGTAACATGCACTGAAGATAATCAAAAGTTCAAACGCGAGGTGTTATCTGACACTGAAGATACTGTAGAGAAGCTACGGTCAACTGTAACTGAATGGGAAATGGAGTTAGTTGGCAATGAagagtatttagattttaaacgcGATTTGTTTATTCGCACAGAAGATAATGTGGAGCTCAAACGCGAGATGTTTTTTGACACCGAACAGGTGCTTGAGTTAACTGACGCTGAAGATAATCCAGAGTTAGAACGTAATTTGTTAACTAGCACAGAAGATAATCTAGAATCCAAACTCAAGTTGTTATCTGACACCAAAGAAGAGCTAGATTTTAATGACCCTGATTATAATCTAGAGTTCAAACGCAATTTGTTAAGTGACATAGAAGATAACCTTCAGTCGAAACGCGATTTGTTAACATGTACTGAAGATGATCTAGAGTTCAAACGCGAGTTGCTATCAGACACTGAAGAGGTGCTAGAGTTAACAGACACCGAGGGGAATCCGAGCTTAAAACGTGATTTGTTAACTCGCTCTTATGAAGACAAACAGTTAAAACGCCATTCGTTAACTCATACTGATAAAGAGTTAACTGAATGTAAAGGGTTAgcggaaaataatataaagtcagAACGCGATTCGTTAACTCGCACTGAGAAAAATGTACAGTTAAAACGCGATGTATTAACTCGCACTGAACAGAAGATATCCGCACGtgattttgaaatatttcaacaaaaacacattttcaTGATTCACAGGAAACTTCACGCGGGAGAAAATACACCGTATACTTGTGATATGTGTGCAACAAGAATATTATCGTAttga
Protein Sequence: MCLSVNVKIQSIQNSPLQDIFEKLASCKLSSEDGRPDTVCYICLSQLQRFYKFRDKSRKSGDILSELSRDGIEISSETVSVLNKEVRLSFLASPVESVWFSSEITQVLVKEEPDSIEDEIKITPKANEAVKVKLEAAVCRVCLSGDLGTRSIKNTLLQVIYEQMTGTMWESKPHLASGYSAAVTLRSTMLLFQLIAQDGRPEDLCYICLAQLHRWRRLIRTTNKSENILTEILHSGAQLTQSSLLNRRPKSDYSITTLDPITFCAEYEVKLEIVDVKEEFIEIDLPMQDGVEGPPVLGQNQIKVELEQETKPDFKETDRNINNSNLLEACDVCNFKSDSEIKLKKHLRLHDPKRKFPCDLCTHRFISSNHLNNHKESLHRFKHECTHCDQVFTAPSQLKRHSLIHTTKQIYSCEKCNKIFDKEKNLRSHYYNVHPGERYYCDRCDYTATSNQWLQDHVLKVHGDSPSFVCDVCHKTLSLKSSLKRHLLNHVTKKAYECKICFKTFSTSQNCRVHNMLHTGEKPYTCDICKKGFREKQRWKLHALTHNNGKKPFSCNICEKEFYRKDVFKKHMTIHYAQKIYACHLCDLKFSSSTYVKKHMISHSDERPYSCEVCQKRFKASATLKCHMTVHNGEKTFTCDLCKKSFTKKQYLLGHMKYHNMRPFACSICDKRFHTRQILLLHTRTHTGEKPYSCVSCDRTFTQKSSLRRHLRSHSGETPYACDICNKHFAEKLSLFTHKISVHSNINKYICDLCYKVCVDRTKIIHHLKFHNAKKPFTCNICQKAFFKLSTLTHHVKMHVGEYRCAFCDVKFESKTNLDRHNVAVHGAVKQYACNRCELPFDGLIRLNSHMRLHTGEKQFACELCEKTYVEKRDLQHHMKLITDNVTPNTICYVCNALLQKFCDFFDMSQKAEQILTKRLLEGIEIIQEKKDKMNILNLSMTATQAMSFIDDGTEEEPEVTVTVKEEPVEHDEWEQFKDDFIDSGVEILHNGDTANESLPKCTSKEPNTPNWSAFQSMEHNQNEICIKTEAPETNNEENTQNDKHTLDFQNFCKALNIFPLKPDFQYRPDINKGRKNESSHTCSICNYTCPLAKTLRRHMKVHDLNNQYSCELCLYRFKDEKKLASHRNRCTVCSYCGKNFKNVHGLRIHVRLHTGEQPFSCDYCGRGFNQKTNLQTHLRVHARHKKFPCDMCHKTFPFNSFLKRHKLIHETNPLDFESMNRIVNCHKLYRRKKSSESLSTCSVCGKILQSKGLNMHMRLHSGELPFSCERCGRGFNQKCNLLVHVERVHTGDEMFTCQVCFIVFPLTSELKRHFLTHRNVKLEIKSEFLHELGLKVKREFDLLSYTEWNVALKRDSLNDTERDVELQRDLLTHINGNTESKCDLSSQTENNLEIKRDLPTNTENNPELPGTKENIETDTKDNHELTNNEENLEFTETVDNIEFTVIEVNPELTDTEDSLELNNAQDNLQSVKTGENPDITDTKENIETYTEDNDELTDTKIMNTQENLEFAETVDNVDLTVTEVNLELHDTKESHVLSKEHPELTDIEEKKLTDIEENLELTDREENKLTDFEDNLELTNREVNELTDIEENLELTAREENELTDIEENLELTDREENKLTDTEENLELTDKEDNELIDIEVNLELNDREENELPDIDENLELNGTKWNQGIKRDWSAYTEDYLELERDLLSRSKKDRQSERDLVTCTEDNQKFKREVLSDTEDTVEKLRSTVTEWEMELVGNEEYLDFKRDLFIRTEDNVELKREMFFDTEQVLELTDAEDNPELERNLLTSTEDNLESKLKLLSDTKEELDFNDPDYNLEFKRNLLSDIEDNLQSKRDLLTCTEDDLEFKRELLSDTEEVLELTDTEGNPSLKRDLLTRSYEDKQLKRHSLTHTDKELTECKGLAENNIKSERDSLTRTEKNVQLKRDVLTRTEQKISARDFEIFQQKHIFMIHRKLHAGENTPYTCDMCATRILSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170775;
90% Identity: -
80% Identity: -