Paff003160.1
Basic Information
- Insect
- Perizoma affinitatum
- Gene Symbol
- ZNF217
- Assembly
- GCA_961405105.1
- Location
- OY560186.1:15997159-16010305[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.082 5.3 8.2 0.9 2 23 155 176 155 176 0.96 2 27 0.014 0.88 10.6 5.6 1 23 182 205 182 205 0.96 3 27 0.00046 0.03 15.2 1.4 1 23 209 231 209 231 0.94 4 27 0.00072 0.046 14.6 1.9 1 23 237 260 237 260 0.93 5 27 0.081 5.2 8.2 0.2 1 23 265 288 265 288 0.96 6 27 0.0006 0.039 14.9 1.4 1 23 294 316 294 316 0.96 7 27 1.8e-05 0.0012 19.7 1.7 1 23 322 344 322 344 0.96 8 27 0.01 0.66 11.0 0.7 1 23 350 372 350 372 0.98 9 27 0.0001 0.0067 17.3 2.8 1 23 379 401 379 401 0.98 10 27 0.00026 0.017 16.0 2.4 1 23 407 429 407 429 0.97 11 27 0.0021 0.14 13.2 3.8 1 23 435 457 435 457 0.98 12 27 0.00018 0.012 16.5 3.3 1 23 463 485 463 485 0.98 13 27 0.013 0.82 10.7 2.7 1 23 490 512 490 512 0.97 14 27 1.8e-06 0.00012 22.8 1.7 1 23 518 540 518 540 0.98 15 27 0.034 2.2 9.4 1.0 1 20 546 565 546 566 0.94 16 27 5.4e-05 0.0035 18.2 0.9 1 23 603 625 603 625 0.98 17 27 0.0013 0.082 13.9 0.3 1 19 629 647 629 652 0.92 18 27 0.037 2.4 9.2 0.1 1 23 658 680 658 680 0.98 19 27 0.0013 0.083 13.9 0.2 1 21 686 706 686 707 0.95 20 27 0.0047 0.31 12.1 5.4 1 23 913 935 913 935 0.98 21 27 0.11 7 7.8 1.3 1 21 941 961 941 962 0.94 22 27 4.8e-05 0.0031 18.3 2.1 2 23 965 986 964 986 0.97 23 27 3.9e-07 2.5e-05 24.9 1.2 1 23 992 1014 992 1014 0.98 24 27 0.0011 0.074 14.0 3.8 1 23 1020 1042 1020 1042 0.98 25 27 0.005 0.32 12.0 0.3 2 23 1073 1093 1072 1093 0.96 26 27 0.00063 0.041 14.8 1.6 1 23 1099 1122 1099 1122 0.96 27 27 0.0079 0.51 11.4 1.1 1 23 1128 1150 1128 1150 0.98
Sequence Information
- Coding Sequence
- ATGCCACTGTTTCAGCTGATCGCGCAAGATGGCAGACCCGAGGATCTTTGCTATATATGTCTTGCAGAGTTGCATAGATGGAAGAGGCTCATCCGAATGACCAACAAATCTGAAAATATCCTGACGGAAATTCTCCAAAGTGGCGCCCAGTTAACGCAATCATCTCTTTTGAACCGAATACCCAAATCTGACTATTCGATAACCACATTGGACGCCATAATTGTCTGCGCTGAATACGAGGTGAAACTGGAAGTATTCGATGTGAAGGAGGAATTTATAGAAATTGACCTGCCCATGCCGGATGAAACTGAAGGTCCGCCACTTCTCGGAGAAAGCCATATCAAAGTAGAGCCGGAGCAAGAAACAAAACCAGCAATGAATTCCTCGCAGCATAGCCTTACAATATACAAACCTGAGTTCAATGAAACTGACAAGAACATTAATAACTCAAATCTCTTCGAGTCTTGTGACGTTTGCAATTTTAAAAGCGTTTCGGAAATTAAGTTGAAGAAACATCTACGCTTGCACGACCCGAAAAGAAAATTCTCATGCGACTACTGTTCGCACAGATTCATCTCGTCCAACCATTTGAGCAACCATAAGAACAGTCTGCACAGATtgaatcatgaatgtgcgatttgcCATCAAGTATTCTCAGCTCCGAGTCAATTAAAAAGACACTCATTGTTACACACGGCAAAACAAATTTACTCATGCGAGAAATGCAACAAGATATTCGATAAGGAGAAGAATTTACGAAGTCATTACTATAATGTTCATCCTGGTGAAAGGTATTTCTGTGGGCAATGCGATTTTACAGCAACGAGCAATCAGTGGTTGCAGGATCATGTGTTGAGAGTGCACGGGGATAGTCCAAGCTTTGCCTGCGATGTCTGTCACAAAACACTCGCTCTAAAGAGCAGTTTGAAGCGGCACCTACTGAACCACGTTACGAAGAAGGCATATGAATGCAAGATTTGCTTCAAAACTTTTAGCACAAGCCAAAACCTCAGGGTGCATAATATGCTTCACACAGGGGAAAAGCCCTACACATGCGACGTATGCCAGAAAGGGTTCAGAGAGAAGCAGCGATGGAAACTGCACGCACTCACTCATAAAAATGGAGAAAAGCCGTTTTCTTGCAACATATGCAAGAAAGAGTTCTATCGGAAGGACGTTTTCAAGAAGCATATGACTATACATTATGCGCAGAAGATTTACGCGTGTCATCTATGCGATCTGAAATTCAGTAGCAGCACCTATGTTAAGAAACATATGATCAGCCATTCAGACGAGAGGCCGTACTCCTGTCAAGTATGCCAGAAACGGTTCAAATCTAGCGCCACTCTGAAATGTCACATGTCCGTTCACAATGGTGAGAAAATATTCACATGTGATCTGTGCAAGAAGTCGTTTACCAAAAAGCAATATTTATTAGGGCACATGAAGTATCATTATAAGAGACCTTTCGCTTGTAGTATTTGCGATAAACGTTTTCATACGAGGCAGATATTGCTTTTGCATACAAGGACTCATACGGGGGAGAAGCCGTACTCATGTGTCAGATGCGATAGGACTTTCACACAAAATAGCTCGTTGAGACGCCATTTAAGAGCACATTCAGGTAACGCGCCGTATTCATGCGACCTCTGTGACAAGCACTTCGCCGAGAAACTGTCACTGTTCACGCACAAAATCTGCGTTCACTCTAACATAGATAAATACATCTGCGATTTTTGCTGTAAAGTGTTCCTTGATAGGACGAACGTCATTCACCATCTAAAATTCCACAACTTTGAAAAGCCGTTCACTTGCGACATATGCCAGAAAGCGTTCATCAAACTGAGCACGCTGACGTATCATGTAAAAATGCATGGATTTGAGTATCGCTGTGCGTATTGCGATGTGACATTCGAATCTAAGACTAATTTAGACAGACATAACGTGGCGGAACACGGAGGTGTTAAACAATACGCTTGCAACAGATGCGAGCTACCTTTCGACGGGCTGATTAGATTGAATAGTCATATGAGGGTACACACAGGTGAGAAACAATTCGCCTGTGAATTGTGCGAGAAAACGTACGTTGAAAAGAGAGATTTACAGCAACACATGAAgcTTATGACAGATAATGGAAGACCTAATACAATTTGCTACGTCTGCAACGCACTGTTGCAGAAGTTCTGTGAATTCTTCGACATGTCACAGAAAGCTGAACAGATGCTTACAAAGAGAATTCTTGAGGGTGTTGAGATATCCCAAGAGAAGGAAGACAAGATGAACATAATCAACTTAACAATGACAGCGACACAAGCCATGTCCTTTGTTGATGACGGGACGGAGGAGGAGCCCGAAGTCACTGTGACTGTTAAAGAAGAACCCGTCGAACACGATGAGTGGGAACAGTTTAAAGAATATATAGattcTGGAGACGAAATACTAAACAACGGCGATACGGTTATGGACACTAGATCCTTGCACGAATACTTACCAAAATGCACATCTAAAGAACCCAATACAACAAACTGGCCTGCTTTCCAAAACAATGAGCATAATCAGAACGACATTCGCATAAAAACGGAAGCCCCTGAAACAAACAACGAAGAAAATAACCAAAATTATAAGCACACAATCGAATTTCAAAACTTTTGCAAAGCACTCAATATAATGCCATTGAAGCCAGACTTCAAATATCTCCCTGACATCAATAAAGGTAGAAAAACGAATGAATCTCGTCATACCTGTAGCAAATGCAACTACACATGCCCCCTCGCTAAGACATTGAGAAGACATATGAAAGTCCACGATCTGAATAACCAATACTCATGCGAGCTCTGCTTTTACCGATTCAAAGATGACAAAAAACTAGCATCACATAGAAATCGCTGCACCGTTTGCAATGTTTGTAACAAGAAGTTCAAAAACGTACACGGTCTAAGGATACATATGAGACTGCACACCGGGGAGCAACCGTTCTCTTGCGATTACTGCGGCCGAGGTTTCAACCAGAAAACCAACCTACAAACACATTTAAGAGTTCACGCTAGACACAAACAGTACCCTTGCGATAAATGCCATAAGACTTTCCCATTCGATTCTTTTTTGAAACGTCACAAGTTGATGCACGAAGCTAACCCGCTAGACTTTGAGAGTATGAATCGGATTGTGAACTGTCATAAACTTTATACTCGTAAGAAGAGCTCGGAGAGTCTGAGCTCATGTAGCGTTTGTGGGAAGGTCCTTCAAAGTAAGGGTCTAAACATGCACATGAGACTACACTCGGGAGAGCGTCCCTTCACCTGTGAGCGATGCGACAGAGGCTTCAACCAAAAATGCAATTTACTAGTTCACGTAGAAAGAGTTCATACGGGAGATGAAATGTTTACGTGTAAAGTGTGCTTTAATGTGTTTCCTCTGACCTCGGAGTTGAATAGACATTTTTTAACGCACACCAATGTAAAATTGGAGATTAAAAGCGAATTTTTGCACGAGCTACAGTTAAATGTGAAGCGCGAATTGGATTTGTTGAGATATACTGAATGGAATGTAGCATTAAAACGCGATTCGTTAAATGACACTGAACGGGATGTTGAGTTACAGCGCGATCTGTTAACTCACATTAACGGAAATATCGAGTCAAAACGCGATTTATCAAGTCACACTGAAGGTGATCTCGAGATAAAACGTGATTTTCTAACTCACACTGAAAATAATCCAGAGTTAACTAATACTAAAGAGAATATAGAGAATGACACTAAAGATAATCATGAGTTAACTAACCATGAAAATAATCTAGAGTTTACTGAGACTGTAGAAAATATAGAGTTTACTGTCATTGAAGTAAATCCAGAAAAATTAACTGACACTGAAGATAATCTTGAGTTTAATAATGCTCAAGATAATTTACAGTCAATGAATACTGGAGAAAATCCAGAGATTACTGATACTAAAGAGAATATAGAGACTTACACTGAAGATAATGAAGACTTAACTGACACTGAAAATATTCGAAAGTTAATGAATGCTCAAGAAAATCTAGAGTTTGCTGAAACTTTAGATAATGTAGAGCTAACTGTTACCGAAGTGAATCTAGAATTACATGACACTGAAGAGAATCTAGAGTTATCTGACACTGAGGAGTATCTAGAGTTGACTGACATTGAAGATAATGAGTTAACTGACATTGAAGAGAATCTAGAGCTGACTGACAGAGAAGATAATGAGTTAACTGATATTGAAGAGAATCTAGAGTTAAATGCCAATAAATGGAATCAAGGCATAAAACGCGATTGGTCAACTTATACTGAAGATTATCTAGAGTTAGAACGCGATTTGTTAAGTCGCGCTAAAAAGGATCGACAGTCAGAACGCGATTTGGTAACATGCACTGAAGAGAATCTAGAGTTCAAACGCGAGGTGTTATCTGACAACGAAGATACTGTAGAGAAGCTAGGTTCAACTGTAACTGAATGGGAAATGGAGCTAGTCGGCAATGAAGAGTATTTAGATTTCAAACGCGATTTGTTTATTCGCACCGAAGATAATGAAGAGCTCAAACGCGAGATGTTATCTGACACTGAAGAGGTGCAAGAGTTAACTGACGCTGAAGATAATTCAGagttagaaaataatttgttaacTAGCACCGAAGATAATCTAGATAATCGCAAGTTTTTATCTGACACCGAAGAAGAGCTAGATTTTAGTGACCGTGATGATAATCTAGAGTTCAAACGCAATTTGTTAACTGACATAGAAGATAACCTACAGTCGAAACGCGATTTGTTAACATGCACTGAAGATGATCTAGAATTCAAACGCGAGTTGCTATCAGACACTGAACAGGAGCAAGAGTTAACGGATACCGAGGGGAATCCAAAATTGAAACGTGATTTGTTAACTTGCCCTGATGAAAACCTACAGTTAAAACGCTATTCGTTAACTCATACTGATAAAGAGTTAACTGAATGTAAAGTAGGGTTAACCAGCACGGAAAAGAATATAAAGTCAGAACGCGATTCGTTAACTCGCACTGAAAGATGTGAACAGTTAAACCACGATATGTTAACTCTGAATATAACCGCACGCGATTAtgaaatatttcaacaaaaacacattttcaTGATTCACAGGAAACTACACGCGGGAGAAAACACACCATATACTTGTGATATGTGTGCAACTAGAATATTCTCGTAttga
- Protein Sequence
- MPLFQLIAQDGRPEDLCYICLAELHRWKRLIRMTNKSENILTEILQSGAQLTQSSLLNRIPKSDYSITTLDAIIVCAEYEVKLEVFDVKEEFIEIDLPMPDETEGPPLLGESHIKVEPEQETKPAMNSSQHSLTIYKPEFNETDKNINNSNLFESCDVCNFKSVSEIKLKKHLRLHDPKRKFSCDYCSHRFISSNHLSNHKNSLHRLNHECAICHQVFSAPSQLKRHSLLHTAKQIYSCEKCNKIFDKEKNLRSHYYNVHPGERYFCGQCDFTATSNQWLQDHVLRVHGDSPSFACDVCHKTLALKSSLKRHLLNHVTKKAYECKICFKTFSTSQNLRVHNMLHTGEKPYTCDVCQKGFREKQRWKLHALTHKNGEKPFSCNICKKEFYRKDVFKKHMTIHYAQKIYACHLCDLKFSSSTYVKKHMISHSDERPYSCQVCQKRFKSSATLKCHMSVHNGEKIFTCDLCKKSFTKKQYLLGHMKYHYKRPFACSICDKRFHTRQILLLHTRTHTGEKPYSCVRCDRTFTQNSSLRRHLRAHSGNAPYSCDLCDKHFAEKLSLFTHKICVHSNIDKYICDFCCKVFLDRTNVIHHLKFHNFEKPFTCDICQKAFIKLSTLTYHVKMHGFEYRCAYCDVTFESKTNLDRHNVAEHGGVKQYACNRCELPFDGLIRLNSHMRVHTGEKQFACELCEKTYVEKRDLQQHMKLMTDNGRPNTICYVCNALLQKFCEFFDMSQKAEQMLTKRILEGVEISQEKEDKMNIINLTMTATQAMSFVDDGTEEEPEVTVTVKEEPVEHDEWEQFKEYIDSGDEILNNGDTVMDTRSLHEYLPKCTSKEPNTTNWPAFQNNEHNQNDIRIKTEAPETNNEENNQNYKHTIEFQNFCKALNIMPLKPDFKYLPDINKGRKTNESRHTCSKCNYTCPLAKTLRRHMKVHDLNNQYSCELCFYRFKDDKKLASHRNRCTVCNVCNKKFKNVHGLRIHMRLHTGEQPFSCDYCGRGFNQKTNLQTHLRVHARHKQYPCDKCHKTFPFDSFLKRHKLMHEANPLDFESMNRIVNCHKLYTRKKSSESLSSCSVCGKVLQSKGLNMHMRLHSGERPFTCERCDRGFNQKCNLLVHVERVHTGDEMFTCKVCFNVFPLTSELNRHFLTHTNVKLEIKSEFLHELQLNVKRELDLLRYTEWNVALKRDSLNDTERDVELQRDLLTHINGNIESKRDLSSHTEGDLEIKRDFLTHTENNPELTNTKENIENDTKDNHELTNHENNLEFTETVENIEFTVIEVNPEKLTDTEDNLEFNNAQDNLQSMNTGENPEITDTKENIETYTEDNEDLTDTENIRKLMNAQENLEFAETLDNVELTVTEVNLELHDTEENLELSDTEEYLELTDIEDNELTDIEENLELTDREDNELTDIEENLELNANKWNQGIKRDWSTYTEDYLELERDLLSRAKKDRQSERDLVTCTEENLEFKREVLSDNEDTVEKLGSTVTEWEMELVGNEEYLDFKRDLFIRTEDNEELKREMLSDTEEVQELTDAEDNSELENNLLTSTEDNLDNRKFLSDTEEELDFSDRDDNLEFKRNLLTDIEDNLQSKRDLLTCTEDDLEFKRELLSDTEQEQELTDTEGNPKLKRDLLTCPDENLQLKRYSLTHTDKELTECKVGLTSTEKNIKSERDSLTRTERCEQLNHDMLTLNITARDYEIFQQKHIFMIHRKLHAGENTPYTCDMCATRIFSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01171645;
- 90% Identity
- -
- 80% Identity
- -