Pace009865.1
Basic Information
- Insect
- Periphyllus acericola
- Gene Symbol
- dmrta2_1
- Assembly
- GCA_949715065.1
- Location
- OX454266.1:25164212-25174616[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-16 1.6e-12 47.6 6.4 19 47 14 42 7 42 0.95 2 2 3 2.7e+04 -10.8 7.8 13 13 293 293 282 304 0.50
Sequence Information
- Coding Sequence
- ATGGATCCTTATTGGCTATACTCATCATGCGATAAAGTGggaCACAAACGTTATTGTCGTTGGAGGGATTGTGCATGTGCAAAATGTACTTTGATAGCAGAAAGACAGAGAGTTATGGCTGCCCAAGTAGCTCTACGGCGGCAACAGGCTCAAGAGGAAAACGAGGCAAGAGAGCTTGGCTTAATATACCCTCCACCATCATCGTCCTCTTCGGCAGCAGCTAGGTCAAGTCCAGACGAAAAGAGAGCGCGGCTCAGTTCAGAAGAATCGATCACTGCAAAACACGACCAGACGATCGGCACACAAGATCAAAACACACGAAGCCGTTCGTCCAGCGTGTCGCCAAATGCCCCGACCCAAGTGACGTCCACACAATTCGCCGCCAAGTTCAACAGCCCCACAAGATCGGAGGTGGAAAGCAACGAGAGCAGCAACGAAGCGGCCCCGGAAAACCTGTCGCTGCCCAAGCGAAGAGACTCGAGCTCGCCGACCGAACAACCCGAGCGTTCCCGCCTGCCGTCGAACTATCCGAACTTCACCAGCTTCCTGGAATCGAGCGCTGcggctgccgccgccgccgccaccggcgCCAACTCGGTCGGCCGGTCGGCCGTGGACGTGCTCAGGCGCGTTTTCCCGTACAAGAGACGCGTGGACATCGAGACCGTGCTTCAGAGGTGCAACGGCGACGTCCTGCACGCGATCGAGCTCATGATGTGCTCGTCCGATCAGCTGCCCGCCATGACGCACCCGTCGCTGATGGACTCGCACTCGGCGTTCTCGCCCATGTCCGCGGCCGCGGCCACGGTGTGCACAGCGGCGGCCGCCATGACGTCGTTCcatcaccagcagcagcagcagcagcaacagcatcaccatcatcagcagcagcagcatcaccATCAGCACGCGCCGCGTTTCCTCACCGCGCCCATTCACCATTACCTGCAGCCGCAACTGCACCACCTCACCACGGTGCACCCGCACGCGATGACCTACCAGTCGCACCACGTGAACCCGGCCGCGACCTCGCCGCGATCGCCGTCCCCCGGGTCCGACAAGACGTCGTTCTCGGATTGA
- Protein Sequence
- MDPYWLYSSCDKVGHKRYCRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLIYPPPSSSSSAAARSSPDEKRARLSSEESITAKHDQTIGTQDQNTRSRSSSVSPNAPTQVTSTQFAAKFNSPTRSEVESNESSNEAAPENLSLPKRRDSSSPTEQPERSRLPSNYPNFTSFLESSAAAAAAAATGANSVGRSAVDVLRRVFPYKRRVDIETVLQRCNGDVLHAIELMMCSSDQLPAMTHPSLMDSHSAFSPMSAAAATVCTAAAAMTSFHHQQQQQQQQHHHHQQQQHHHQHAPRFLTAPIHHYLQPQLHHLTTVHPHAMTYQSHHVNPAATSPRSPSPGSDKTSFSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499664;
- 90% Identity
- -
- 80% Identity
- -