Basic Information

Gene Symbol
lilli
Assembly
GCA_949715065.1
Location
OX454265.1:42304959-42346864[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 9.4e-10 2.5e-05 24.3 27.8 4 248 2 240 1 252 0.46
2 7 0.002 55 3.4 2.3 301 361 200 258 190 293 0.65
3 7 0.00013 3.5 7.3 22.2 416 514 380 482 339 482 0.58
4 7 1 2.7e+04 -22.1 42.8 423 472 524 574 484 585 0.41
5 7 1 2.7e+04 -9.3 17.8 73 204 646 762 600 796 0.39
6 7 0.0008 22 4.7 4.2 443 477 899 933 859 969 0.56
7 7 1 2.7e+04 -7.4 4.3 206 219 1268 1281 1246 1298 0.40

Sequence Information

Coding Sequence
ATGGAACGGGAAAAACAACGGGAGAAAGAAAGACAGTCCAGACAGCAACAAGTATCCGAGAACAACGTCAAAGATAAGAAAGAACTGTTCGGTTCTCCAGTAAAGGTGGACGACGAGCAAGACGACGAGCAGAGCCAGCTGATCCAGAGTCAGTTGGGTTCGTTCGACGACGCCAAACCGTACTTGGATCTGGTGTTCAGCTGCGGCATCACCGGCATGCCGCAGAGtcccgcgccgccgccgccgccgtcttcttcaacgtcgtcgtcgtcgacgctACCCGCTGCCGCCGGCATGATGCACCATCACTCGTCGTCGTCATACCCCTCGTCCGCcaccgcggccgcggccgccAAGTCACACCATCACGCCAGCGCGGCCGCGGCCACCGTGGTCGGTCAGCAGCAGTCGTCCCGGAGGTCCGTGTCGCCCGCGTCCGGGTCCGCGCCGTCCGCTGTCGGGTCGTTCAAGAAGCCGACCGTCACGTCACACGCCATGGccaggtcgtcgtcgtcgaacaGCGGGTCGTCCTCTTCGTCCGCACACTTTCAGCCCCCGGCCAACCCACCCAGGAACAGTAACTTTTTGAAACCGGGTGAAATGAAGCCACCACCATACCGATCCACTAACAACACCATGAGAAGTAGTCATTCTTCGCACCATAGGCCGACACACAAGTCCATATCAAATGTAAAGAATagtcaTAACACAAATGATACCAACACGCCCAGCACGATCGAAGACATTCTAAACGAAATGACTGTCGGGCTTCCACTCGTGTCGGACATTGCGGAAACGCCGAGGGTCACGATCGTCGACTCCAAGTACACCGCAGACGGGAAGGTGGAACCGCAGCAAAGGATGAGCCCCAAAGATGCGACGGAGAGCCTGAAGAAAATGCTCGGCGAGCCCAAACCGCTTTTCGCCGAACCAGTACACAGGAACTTGCCGGGATCATCTTCGCACGGCGTGTCGCCCGACGGCGGGTCCAACGCGACCGCCGCAATCGCCGCGGTGCCCATGGACGCCAAACCGTCTGGACCGTACAACCATTCGCTGTTCGCATCGTACATGGTCAAACCATCCGTCAGAGGGTCCAACATAATGCCACAACCGCAACAGCCACTGCTACAGGAGTCACAACAGTTGGCACTGTCGCCGCCGACCGAAAAGAACCGACGGAGTTCCACGTCGACCAACGTTATTTCGTCGGACGCGGCAAACTGCAGTTCCGTTAAGGCTGATAAAACCAGTAGTGATATGTCCGTGGACGAAGACAGCTCGTCCAGCGAGGAAGACGAGAAGGACAGCAGTTCAGACAGCAGTTGCAGCGACAGCGAGAGCAACGACGAGAAGAAAGACGACCCGCCGGCCGTGTCGCCTCCTCGTCCGCAAGAGGAACAAGAGGAAGAACAGCCCAGGTGGTACCTGAAGAACTTTTTGAAAAAGAGCACGCCCGACACCAACAACACGACCCGGACGTCCCAACAGgacgAATCTGTCGGGATGACTGATCCCAAATCTAGTCCAAGCTTTCCAATTCAACGTTCTGAGGTTGTTGAACTATTATCTGAAATGTCGGACTCGGACTCTAACCATAGTGATAAGCAAAAGAGTCAATCTGACTCGTCATCTTCTTCATCTTCATCTTCTTCGTCCTCCGAAGATGAAGacgataaaaagaaaaaggcaTGTGAGAGCAGTTGTGATAGTGATTCGTCATATAGTAGCCGTTCACATGCATCGTCTAAACCAATTACAGACTTGCACAAAAAATACTCAGCGTTAGTAAAGTGTGAGAAAAAGAATCTCAAGAAGTCGTTTGAAAAACCTGTTAAATCAGTTGAGAGAAAACTACCTCCtgctttaattaaaaaagagGAACCTGCAGTCGAAGAACCAGCTAAGAAAAAGAGAGGTCGGAAAAAGGGTCTGACTAGCATGCCAAAACCTCTAGTGCCATCAAAAATAAAGTCAAAACCATTGATTTCATCGGATTCAGAGGACGATGATGAACCGCCGAAACCTGTAAAGATCAGTGAAAAACGAAGAGGACGACCACCGGGAAAGAAATCTAAAGTGATATTGGCAAGTAGTGAATCTGAAGAATGGACCGATAGTAGtcgtaaaaatcgtaaaaaagatTCAGAAAAGAAGTCTTCGCATTCAGTAAAGAAAACGCCCTCTTGGGAAAAGAACCAACCCCAGAAACCCGTGGCCCGTGTCAGTGCTGCTCTACGTCCGCCTCGTTCAATGTCAAGTAGTGCGGATTCAGACTCGTCCGATGTAGAACGCAGGCCACCGCCTATGTCTACAGCAACCGAAAGTCCGCCTAAACTCGACGTTGAAGGAATCAAAGTTCAAGACAAGAAGAAAAATGATACTTTAAGGAAACTGTTCAGAACTCGGCGTGAAGAAGGTGGCTCCAAGAGTGGAGGAAAATCCAAAGGCGGTAAAGGTGGTAAAGGAGGTGTAATCATTATTGACAATAATGAAGCGATGCGCAACGACAACGAACGTGTAATATCACCTGTACCAGTCGTTCCTCCTATGCCCAAAGAACCCGAATGTCCAAAGACTTCGAAAATGTCTGTGATCTGTAGAATACCATTAAGCAAGTTTgctaatttaaagtatttattaaaaccgGCGAGATCTGAAGAGCTTAGAACCTGCGCCGATTTGGCCAACACCAGGCAAgaagaaaaaaagcaaaaacacAGGCACCATAAACACCATCATAAAAGCAGTCCATCACAATCCGCTTCGGGATCGGAAAAATCCAAATCAAATGAATCTCCTGCCAACGTCGCTCAACCTACACAGCCGCTACTACAACAGCCGTCATCCGACAGTTATACCAAAGGCATGGTGGACAGTGGTAACATATGGCGTAAGCCACCGTTGTCCGTGTGTGCAGTCATACCAGAAGCTAAAGTCAAACCCCTCGAgcataacaCCATGTCTTACTTGCAACGCCCTGCCGCCACTAGCGGTATCATGCATGGTCCTTATGAAGAATCATCAGAGGACGAAGATAACGGTCCACCACCATTTCTTCCTTTTAGCACCACCGCGGTTCAAATAATGGATCCTCGGTATAAACGGTCACTTGAACTAGATCAGTACACTCCTAGTGCGACAAAGAGACGAAAGTTTCACACTTCAACGACGTCTTCCACATTAGCACGATATGCGACGGCAAGgGATGACGGATTAATGAACGATATCTTGGTGGACCGTATGCATGAAGTTCCCGTACAACCTCCTCCCAGACAACCGTCGTGGCGTATGCAGTCCATGCATCACCAGTATCCTCCGAGGAAAGGATTTTTCTCATACTTTGTTACGGACTTGTATCCTGAAAATAATATGCACCAAGAAGTCCCGTTAAAGGAGGCACAAGCATTAACCAAATTAGCGGAATACGAGCCTGATCCCATTACTCAAGAAATGAAATACTTGGACGGTATACTATGTTTTGTACTCAGTGGTCATCTGATGGAAAACAATGGGACCAGGGAGAGAGCGATACTCAAGGTGTATAACGATACAATTGATCTAATTAAAGTTATATGGTCAAAGATTTACAACTACCGAGCGGACTGTGATCACGAAGAGCTTGACGAGATATTCGAAATGGCCGACAATCCAGAAAGAGACAACAGGCTTTTAATACTTTGGATGAGGTGTCTAAGCTTTTTGCGGTTGAAGTTGTTTAAACTACTCGTGTACCAAAATAGGCAAAATTTCAAGACTGTTCAACAACATTTCCTCAAGAATGTGGGTTCGAGTCCCATTTCACCGTCTCCGTCGCCGGCCAGCTCCGTGGAGAGCCATTCGTCGGGGTACTGCAGTAGCAGCATCACGCCAAGCGGTGCGGTCGCTTCGTCGGGAGCCGCTACGGGTGTGATTGGCGTTCCAATAGTCGTGCATAACGCCATACATTCGGAGCACATCCTTTACTGTCATCTGGCCGCCGCACACGAGATGTGGCAACGTGCCGACTTGTTGGTTATGCGCGGCAAACACACACaatttttcgTTGAGATGGACCGACATTGCGGACCATTGACACTGCACAGCTCCGGCCACGATCTCACATTTTATGCTCGCATCGCCATTTCCCGCATGAGATGTGAGTTTAACATCAAAAATTACCTTCCATGA
Protein Sequence
MEREKQREKERQSRQQQVSENNVKDKKELFGSPVKVDDEQDDEQSQLIQSQLGSFDDAKPYLDLVFSCGITGMPQSPAPPPPPSSSTSSSSTLPAAAGMMHHHSSSSYPSSATAAAAAKSHHHASAAAATVVGQQQSSRRSVSPASGSAPSAVGSFKKPTVTSHAMARSSSSNSGSSSSSAHFQPPANPPRNSNFLKPGEMKPPPYRSTNNTMRSSHSSHHRPTHKSISNVKNSHNTNDTNTPSTIEDILNEMTVGLPLVSDIAETPRVTIVDSKYTADGKVEPQQRMSPKDATESLKKMLGEPKPLFAEPVHRNLPGSSSHGVSPDGGSNATAAIAAVPMDAKPSGPYNHSLFASYMVKPSVRGSNIMPQPQQPLLQESQQLALSPPTEKNRRSSTSTNVISSDAANCSSVKADKTSSDMSVDEDSSSSEEDEKDSSSDSSCSDSESNDEKKDDPPAVSPPRPQEEQEEEQPRWYLKNFLKKSTPDTNNTTRTSQQDESVGMTDPKSSPSFPIQRSEVVELLSEMSDSDSNHSDKQKSQSDSSSSSSSSSSSSEDEDDKKKKACESSCDSDSSYSSRSHASSKPITDLHKKYSALVKCEKKNLKKSFEKPVKSVERKLPPALIKKEEPAVEEPAKKKRGRKKGLTSMPKPLVPSKIKSKPLISSDSEDDDEPPKPVKISEKRRGRPPGKKSKVILASSESEEWTDSSRKNRKKDSEKKSSHSVKKTPSWEKNQPQKPVARVSAALRPPRSMSSSADSDSSDVERRPPPMSTATESPPKLDVEGIKVQDKKKNDTLRKLFRTRREEGGSKSGGKSKGGKGGKGGVIIIDNNEAMRNDNERVISPVPVVPPMPKEPECPKTSKMSVICRIPLSKFANLKYLLKPARSEELRTCADLANTRQEEKKQKHRHHKHHHKSSPSQSASGSEKSKSNESPANVAQPTQPLLQQPSSDSYTKGMVDSGNIWRKPPLSVCAVIPEAKVKPLEHNTMSYLQRPAATSGIMHGPYEESSEDEDNGPPPFLPFSTTAVQIMDPRYKRSLELDQYTPSATKRRKFHTSTTSSTLARYATARDDGLMNDILVDRMHEVPVQPPPRQPSWRMQSMHHQYPPRKGFFSYFVTDLYPENNMHQEVPLKEAQALTKLAEYEPDPITQEMKYLDGILCFVLSGHLMENNGTRERAILKVYNDTIDLIKVIWSKIYNYRADCDHEELDEIFEMADNPERDNRLLILWMRCLSFLRLKLFKLLVYQNRQNFKTVQQHFLKNVGSSPISPSPSPASSVESHSSGYCSSSITPSGAVASSGAATGVIGVPIVVHNAIHSEHILYCHLAAAHEMWQRADLLVMRGKHTQFFVEMDRHCGPLTLHSSGHDLTFYARIAISRMRCEFNIKNYLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01346444;
90% Identity
iTF_01346444;
80% Identity
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