Pmec034618.1
Basic Information
- Insect
- Perdita meconis
- Gene Symbol
- dmrt1_1
- Assembly
- GCA_030770465.2
- Location
- JASKOS020000024.1:1314956-1316169[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.8e-26 5.9e-22 78.4 11.2 1 47 20 66 20 66 0.99 2 3 0.87 8.9e+03 -2.2 0.3 2 15 107 120 106 123 0.70 3 3 1.2 1.2e+04 -2.6 0.1 2 7 161 166 160 170 0.75
Sequence Information
- Coding Sequence
- ATGAAGACCGACCATGGCAATTCGAGTCAAGTGAAACATGGTATCGAGCAGCGTTTGAGGAGTCCAAAGTGCGCGAGGTGCAGGAACCACGGTGTGATTTCGGGTTTGAAGGGCCACAAGAGATCGTGCGCGTGGAAGGATTGCCGTTGCCCTTGCTGTTTGCTCGTGGTCGAGAGACAACGAGTGATGGCAGCGCAGGTTGCGCTCAGGAGACAGCAACAGGCTCAAGGCAGTTTCTTCGGAGACAATAGTCTCTCCTCGGTTTGTCACGCGCCGGTGGATTCGTCGAATTCGCCTTATTTACTTAAATCGGAGCAGAATCCTGTTTGCAGAAGAACAAAGAACTCGTTTCAACGCCATCAGCTGCACTTCACGCAGACCAGCATAAGTGTGACGCAGGGATTCTATGGACTGAAGACGATCCACGGTTTACCTACAGCATTTACCACAGACCCTCCGCTGTTGAATGGTTTATCGCATAATCCGGAGTGTCAGCGAACTTCCGAGAGTTCAAAGAAATTACCCTCTTTTCCTGCCACGTATTCTACGATTCCATGGTTCGAACATGTCGCGGAACCTCATAGGACCAAAAaggattttaataatttcgcTTCCACGGTGACGGACCTCGGCAACATCTCCGAAGCTAAGAATGGACCTTGCTTAGAGAAGAAGTCGACGATTTCCTTTAGCGTGGAATCTATCATTGGAACAAAATGA
- Protein Sequence
- MKTDHGNSSQVKHGIEQRLRSPKCARCRNHGVISGLKGHKRSCAWKDCRCPCCLLVVERQRVMAAQVALRRQQQAQGSFFGDNSLSSVCHAPVDSSNSPYLLKSEQNPVCRRTKNSFQRHQLHFTQTSISVTQGFYGLKTIHGLPTAFTTDPPLLNGLSHNPECQRTSESSKKLPSFPATYSTIPWFEHVAEPHRTKKDFNNFASTVTDLGNISEAKNGPCLEKKSTISFSVESIIGTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00232623;
- 90% Identity
- -
- 80% Identity
- -