Pfun000438.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- Hr39
- Assembly
- GCA_027564355.1
- Location
- JANSTX010056721.1:36835-41120[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2 1.7e+04 -5.7 11.7 86 187 71 176 12 203 0.47 2 4 0.98 8.1e+03 -4.3 14.4 44 145 353 460 336 480 0.64 3 4 0.094 7.9e+02 -0.9 11.3 38 98 526 588 512 612 0.48 4 4 2.2e-91 1.8e-87 294.3 0.0 1 408 674 1083 674 1083 0.71
Sequence Information
- Coding Sequence
- ATGGCTACTTCAGGAGGAGGTGGTGGCACAACAACTAGTACCAGTAATATAGTTAATACTGTACGAAGTAATGTTTCTATTACCAGTATTAATTGTGAAAATGATGCAATACAATCAAATAATTTGTCTCCGtccaccggtattgcaccaacaacatcatcattactcaatggaggaacattatcattaattagcaatagtaatagtaatattaataatagtagtagtagtagtataagtaataataataataataataatggcaatcatatttatgggactggtggtgtaagaataacagtgccaaaaatggaagattcagatgaatctgatactgaactgtcaaatattgaaaattcaatattatattcaacatcaacgacaacatctacatcgtcaacatcgtcatcatcatcaaccgcCGAAATACAATCAAGTATTACACATAATAGTAGCAACACAATACCAACTACATCATCTTCAACATTTGTTAACATGAGAACCAATAATAATAATAGACAAATTAACGATAGTATTGGATATAGTACTGTGAGTATTGGTGGTAATTGTAATAATAATAGCAATACTGTGCCACGACCAATGTCCTGGGAAGGTGAATTATCTGAACCAGAAGATATAATGGATATAGAAAATTCATCAAATAGTGTAATGGAATCAACAACATTATCGACATCACCAAAATCATTAGTATTTAATTCATTTGCACCACTAACAaataatataattgataataataatgatagtatgacaggcattagtaaagttgaaacaattaatgatgttgattgtactggcagcaataatagtgacagtagtaacaatagtaataataatattagtattaatcagcaacaaccggatatattgtcattagtaAAAAAAGAATCAATAAAACCAGAATTTAACGATATTCAATTTAATGCTATTGATACACATAATCAAAATTCGCTGGCAACAACATTACATATGCATACGGAACCATTAAAAAAATATGCATCCGATATAATCAATTTAAAATACGAACCTGGTGTAATGCAACAGCAACAACAACAACAACAAGATTCAACAACATTAACACCATCAACAACATCAACAAATGTATTAAATAATTCATCGACAACAAATAGTATTCATTCACCGTTATTAGTTAGATCAAAAACAACACTGTTGCCAGCAAATCCCAGTCCTGATTCAGCAATTCATAGCGTTTATACACATAGTTCACCAAGTCAATCGCCGTTAACTTCAAGACATGCCCCATATACACCATCATTAAGTAGAAATAATAGTGATGCATCACATAGTAGTTGTTATTCATATAGTTCTGAGTTTAGTCCAACACATTCACCAATACAGGGACGTCatatgtcttcttatggaagtaatattcttggtaatactggtaatgctaatgttggcggtggtaacaatggtggcaataatattaataataataataatgtcaattttaacggatcaacattacatcattcgttattgtacagaccactaattgatggagcaaataatagtagtaatagtagtagtagtacttcaaatttattgtctgatagtttgcaacatcaacaaaaacatcagcaacacgtacaacaacaacaacaacaactacatcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacatcaacaattacatcgattacaacagcagcaatcacaggacgattcaatattaGAAAATGAtacaataccgtcggctggtatatctagacaacaattaatcaataGTCCATGTCCAATATGTGGCGATAAAATATCAGGATTCCACTATGGCATTTTTTCATGTGAATCATGTAAGGGATTTTTCAAACGTACCGTACAAAATCGTAAAAATTATGTATGTTTACGTGGTGCAGCTTGTCCAGTAACAATAGCAACACGTAAAAAATGTCCAGCATGTCGTTTTGAAAAATGTTTACAAAGAGGTATGAAATTGGAAGCAATACGTGAAGATCGAACACGTGGTGGTCGTTCAACATATCAATGTTCATATACATTACCAAATACAATGTTAAGTCCACCATTAAATAATAGTGGCGGCAATGGCAATAATAGTAACGGTGGAGTTATTGGCATTAATGGTAATAATTTATTGGGTAATAATTCAATGTTAGATGGTATAAATTTTTATACGAATGGTCAAAATGGAAATACATCAATTAATAATCAACGTCAACATAGAAATAATCATCAACATTTTTTCAATGGACCAACATTTAAGGTAGAAAATTCCGATGGATATAATAGTAATAATTCGTATAATAATAGTCAAGGCATTCCAATATTATTGCAAGAAATTATGGACGTTGAACATCTATGGCAATATAATCAAAGTGAATTATCACGTTTAAATACACAACATTTAGGtataactgctacaacatcatcatcttcatcatcctcgtcatcgtcgtcttgtacaacaccatctacatcatcggcatcaccgtcaacatcatcggcatcaggtggttgtgatggtgctGCTACAACAATTCATTCAATGAATAATACAACACAAACAAGTATTTCAACAAATCCACTGTTGGCTAGTGCTGGATTAAATAATGGGGATAATACAAATCCTGATTTAATTGCCCATTTATGTAATGTTGCAGATCATCGTTTATATAAAATTGTTAAATGGTGTAAAAGTTTGCCACTTTTTAAAAATATATCGATTGATGATCAAATTTGTTTATTAATAAATTCTTGGTGTGAATTATTATTATTTTCATGTTGCTTTCGTTCAATGACAACACCCGGTGAGGTACGAATTTCATTGGGAAAATCTATTAATTTGGCTCAAGCAAAATCAAGTGGTTTACAAGCATGTATTGAACGAATGCTTCATTTAACAGATCATTTAAGAAGATTACGTGTTGATAGATATGAATATGTTGCAATGAAAGTTATTGTACTTTTGCAATCAGATACATCTGAATTGCATGAACCGGAAAAGGTGCGTGCAAGTCAAGAGAAAGCATTACAGGCTTTACAATCTTATACATTGGCACATTATCCGGAATCACCAGCAAAATTTGGTGAATTATTATTACGAATTCCAGAATTACAAAGAACGTGTCAGGTTGGTAAAGAAATGTTAACGATTAAATCAAAAGATGGTGAAGATTTTAATTTATTAATGGAATTATTACGTGGTGAACACTGA
- Protein Sequence
- MATSGGGGGTTTSTSNIVNTVRSNVSITSINCENDAIQSNNLSPSTGIAPTTSSLLNGGTLSLISNSNSNINNSSSSSISNNNNNNNGNHIYGTGGVRITVPKMEDSDESDTELSNIENSILYSTSTTTSTSSTSSSSSTAEIQSSITHNSSNTIPTTSSSTFVNMRTNNNNRQINDSIGYSTVSIGGNCNNNSNTVPRPMSWEGELSEPEDIMDIENSSNSVMESTTLSTSPKSLVFNSFAPLTNNIIDNNNDSMTGISKVETINDVDCTGSNNSDSSNNSNNNISINQQQPDILSLVKKESIKPEFNDIQFNAIDTHNQNSLATTLHMHTEPLKKYASDIINLKYEPGVMQQQQQQQQDSTTLTPSTTSTNVLNNSSTTNSIHSPLLVRSKTTLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHMSSYGSNILGNTGNANVGGGNNGGNNINNNNNVNFNGSTLHHSLLYRPLIDGANNSSNSSSSTSNLLSDSLQHQQKHQQHVQQQQQQLHQQQQQQQQQQQQQQQQHQQLHRLQQQQSQDDSILENDTIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTIATRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPNTMLSPPLNNSGGNGNNSNGGVIGINGNNLLGNNSMLDGINFYTNGQNGNTSINNQRQHRNNHQHFFNGPTFKVENSDGYNSNNSYNNSQGIPILLQEIMDVEHLWQYNQSELSRLNTQHLGITATTSSSSSSSSSSSCTTPSTSSASPSTSSASGGCDGAATTIHSMNNTTQTSISTNPLLASAGLNNGDNTNPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMTTPGEVRISLGKSINLAQAKSSGLQACIERMLHLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELHEPEKVRASQEKALQALQSYTLAHYPESPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01168499;
- 90% Identity
- iTF_01168499;
- 80% Identity
- iTF_01168499;