Pfun003073.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- dsx
- Assembly
- GCA_027564355.1
- Location
- JANSTX010031648.1:577-1374[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-26 3.5e-22 77.9 9.4 2 47 46 91 45 91 0.97 2 2 0.63 2.6e+03 -1.7 0.4 10 20 114 124 109 127 0.83
Sequence Information
- Coding Sequence
- ATGAGTGGAGAAAGTTGGACTTCCAGTTGCATGAGTACATCTGATTCTGAGCAATTAGATTCAAAACATGATTTACACCATCACAGTGGTGGAAGTACTTCAAGTTCAATTGGCAATTCAATGAATCCACGTACACCACCAAATTGTGCCCGATGTCGTAATCACGGTTTAAAAGTTGGTCTAAAAGGACATAAACGCTATTGTAAATATCGACAATGTGATTGTGAGAAATGTCTTTTAACGGCCGAAAGACAACGTGTTATGGCATTACAAACGGCATTACGACGTGCCCAAGCACAAGATGAAGCACGTGCAACTTATTTAGATTGTACACTGGATAATCATCATAATGAATCAACGTTACGTCATCATATTTATCAGGGATCAAAAAGTCccggtgaccatttgatcaataataataacaataataatattaataatattaataataatagtaataataataataataataatagtaataataatatgaatcataatattaataataataacaataacaacaacaacaataataataataataacaataataataataataataataataataataataataaccatcatcatcatcaatcaccaattagagttcctttaccggcaaaatcaattGAAGGATGTGATTCATCATCAGCGGTATTGACATGCCACCAACAATTACCTGTAACGGTACCGGATATAAAACCATTACCATTACAAGGTAATCATCTTAATTTAGTACCATCCGACGATCAATCTCAACAACAAATTGGTGAGTTAGATTTTAATTAA
- Protein Sequence
- MSGESWTSSCMSTSDSEQLDSKHDLHHHSGGSTSSSIGNSMNPRTPPNCARCRNHGLKVGLKGHKRYCKYRQCDCEKCLLTAERQRVMALQTALRRAQAQDEARATYLDCTLDNHHNESTLRHHIYQGSKSPGDHLINNNNNNNINNINNNSNNNNNNNSNNNMNHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNHHHHQSPIRVPLPAKSIEGCDSSSAVLTCHQQLPVTVPDIKPLPLQGNHLNLVPSDDQSQQQIGELDFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -