Pfun017285.1
Basic Information
- Insect
- Penthetria funebris
- Gene Symbol
- -
- Assembly
- GCA_027564355.1
- Location
- JANSTX010010633.1:7866-18729[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.26 2.2e+03 -2.5 2.2 27 70 107 130 81 168 0.50 2 3 0.55 4.6e+03 -3.5 0.2 60 68 242 249 221 266 0.45 3 3 2.3e-30 1.9e-26 93.0 11.4 1 93 282 374 282 376 0.83
Sequence Information
- Coding Sequence
- ATGGTACAATTAAAAATATGTGGTCCATTAATTGGAAAATTAACAAAAAATTGGGATCCATCACTCAGTGATTGTTTAGAAATTGTAACAACTTTTAAATCGGGCATTGCTGTAAAAGGAACGTGGAAATTATTAATTATGGACGAGACAGATAAACTTGGTGCTGCAAATCTTTGCAATAGCAATATTATAAATGATCAAGCTTTAAATAATAAAGTAATTAACAATGAACTAAATAATATTAATATTATCAATAGTAATAATAATATAAATAATAATAGTGACACAATGATACAAACTGCTAAAAATGAGGATGAAGAGGAGGAGGAGAATGATGAAAATGAAGAAGAATTTGACTTTAGTTCCAGTGATTTTATGGAATCAGCAAACGATGAGAGTGATAGTGAATCAATTGTAGATAGAAATAAAAAAGATAATGCTAATATTGACTCGAATTTATCATCGATAATTAATAATAAAAATAAATATGATTTAAATGACGAAAATTTATCAGACAATCTAAATATTGATAATTTCGGTAAATTAGGTTCAAAATTGAATACTGACACGAGTAATATTAGTGTAACATCACCGATTGAACAAAATCATTCCACACCAGAGAAGTCAAATAATGTTACTGGTATGTCTTCGGATTACATTAATGAAGCACTGAATATATCTTGTATAAATCGTCAAGAAGAATCTTTTTCCGAAGATAAGACGACGAATGCGAAAAGTGTGAATAGTACTAAACATTCTCGTGATCATCATCTAGAAAATGATATCTATCATAGTGACGAAGATGAGATAATTGTAAACTTTTTAGGAAAAGCAAATGAAATAGCCGAAGCACGTTTGGCTCAAAGACGTCAAGCTCGTGTCGAAGCTCGTGAAATTCGTATGCGTGAACTTGAACGTCAACAAAAAGAACAAGAGCAAAATGCTGATAGAGTATTCGATATGCAAACTGCAGCTGGAATAGATCCAATAGCAAGGACCCGATTATCTATATCAGCGTCTGGTGGACCTATACGTGGAAATTCAATGTCATCGAGACGTAGTAGTGAAGACTCCTTAGAGGAGGAAGGTAGAAGCATTCGAGATATTCGACATGAATTAAAAGTTAGTATTTTATATTTGTTGATTAGTATTACATGCTTATAA
- Protein Sequence
- MVQLKICGPLIGKLTKNWDPSLSDCLEIVTTFKSGIAVKGTWKLLIMDETDKLGAANLCNSNIINDQALNNKVINNELNNINIINSNNNINNNSDTMIQTAKNEDEEEEENDENEEEFDFSSSDFMESANDESDSESIVDRNKKDNANIDSNLSSIINNKNKYDLNDENLSDNLNIDNFGKLGSKLNTDTSNISVTSPIEQNHSTPEKSNNVTGMSSDYINEALNISCINRQEESFSEDKTTNAKSVNSTKHSRDHHLENDIYHSDEDEIIVNFLGKANEIAEARLAQRRQARVEAREIRMRELERQQKEQEQNADRVFDMQTAAGIDPIARTRLSISASGGPIRGNSMSSRRSSEDSLEEEGRSIRDIRHELKVSILYLLISITCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -