Pnig020624.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pentalonia nigronervosa
Gene Symbol
JARID2
Assembly
GCA_014851325.1
Location
scaffold:60113-73676[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.022 75 4.4 0.0 22 68 972 1018 961 1031 0.82
2 3 8.9e-21 3e-17 63.4 0.0 6 89 1537 1618 1533 1618 0.93
3 3 2.5 8.3e+03 -2.2 0.0 49 65 1632 1646 1627 1669 0.76

Sequence Information

Coding Sequence
ATGTCTTCCAATGGGTCAGATGCAAAGAAACGCAAACTTCTGAACAATGAAGAAGCTATTCTTGAGTCAAGTACTAAAAAAATCAAGGTACAAGCTCAGCGTAAATTTGCCCAAAATGCAGTGATATCCACCAGCACTGCACAGAAACCTATTCAGACTCTAGTGGTGCCTAATAATGTGACAAAGCCTCCAGTTAAACGGCCAAATACTGAAGACTTCCTTACCTTCCTTTGTTTTAGAGGTACAAGTTTATTACCACCACGACTAGATTTCTTCAATAAACCTCAACGCTCTCTATCGTCACAAGAGATTGCTGCTGGAAAAAAAAGAAGAAAAAGCACCCCTATACTGCCAGTAACTAATGCAAATAATACATATAATGTAAATAGTGTAAATAATGAATCAATTGAACGAAAAAACATTAGTCAGTTACCACAGACCAAGTTCCCATTATCTAAATTAGGACAGAAAGTTATGGGTCGAAAGTTGGTAAGGTCCAGTTCAAGGTATACTGTTCGACAAGAAGCTCTCACATTACGTCAATTAGCCCTTCGCCATGTTCCAAAAATAAAAAAATCATTGTCAAAAGTTGTTAAACCTTTAGTAAATGAAAATATTAAAAAAATAACTGAGAAAAATGGAAAACAAGTGTCATTAGACGGTAAGCAAATACAAAAATTGAAAGGCCGTATAACTCGATCAAATTCTTTACCGAGTATATTTTGTCCTGCAATAAATCAACTTCGAGATGACAAAGGGAAATGGTGTAAAGGGAGTTGTAGTAATAAATCTTCTTCTAAAACATCTGATGATTTAAAGGATGTGGAAGAAGAAAGACCATCGAGAAAAAAGACTGCATCAAACAATTTAGATCATAGAAGTAATAGTCTGGGTAACATGAAACGAAAGACTAGTATTGCTAAATGTAAAGTGGCAAATAAAAACAACAGAAAAACTAGAAGTTTAACGAGTAAACATAAGAGCAGCGACCAAGATAATTATGTTGTTCCTGATAAGAAGTGTGATAAGAATTTGAAGACTGTATCTAAGAGTAACAAAGCAAATAGTTTAATTGAAACAAAATTAACAGTGGATGTGAAAAGAAGAACATCTTCAGTGGATAACATAAAAGCAATCCGTGAGAGTAAAGATATAATTAATTCAACCCGTTCAAGGCCCCCTAGAAGAACAAAAGAAGCTGCCACTTTATTTATGGAAATGTTACGAAAAGATATGCGGTGCCCTGATGAGCAAGAAGAAGATGATACATCATCCGTTGAGAGTTTTCCTGAGCTTCCTAATACACGAATAAACGAACAACGTGAACGCGAATTAAAAGTGTTTTCCAAACAACAAGTAGAACAAAAGTTATGTGAAAAAAAAGATGATAAACCATTGTCACAAGGAATAGATACTAAAAAGACAAAATTAATTGATAAAAATAAGGTAAATAAGTTGAAAAAAAAGGTTGAGGTGAAAATTCTGGAAAAGAAAAAGGCAAAAGAATTTATAGAGACAATTAATTTTACTGAAAATAGTGGAACAACGTTGTTTAAAAGGAATTTGAGGCCTCGACGTTCTTCCACTATGTTAGATGATTATATCATGACTGATTCGGATGAGGACGACATAAAATGTGAACCTGTTATAGAAGTGAAAAAATGTGAAGCTCCTAAACCGTTAACCAAAACAACAACTATGGCAGGGGAATCGAAATCTCAAAAATGTAAGCTAAGTACTGATGAATCTGTTAAAAAAAATCTTAAAATTAATAAGACTGACTTAAAATCGAAAAAAGATTTGAATAAAGATTCTGAAGTGAAAAAAAGTCTTTCTGAAACTAAGTCAAAAAGTATTTTACTACGTGACAAAGAGCTAGAAATCAATAAAAATAAAAATGATACTGTTGATAAAAAAAATGAAAAATCGTCAAAAAATAAGACTGAAATCGTAGTTATTACTAAAGAACCGAAAACTGCCGGCACTGGTTCAAAAAACGCCGGAAAAAAAGTGCCACTACCCAAACAGCAGACAACAAAAAAGGATAACGCCTTAAATAAGAAAAAACCCAATTTAGATTTGTATAATAATAATAATAATAACAATAACAAAAAAAAGCGGTCTTCATCATCGTCATCGATGATGTCTCCATCGTCTTCCATGTTTAGTGGTATAACTAGTCAAACAAAAGAAGAGCTTTTGGAACGTATGGCTGCGAATTTTGATGCTAAATCTACCGTTTGTGAGGGTGCCGAGAAACTTGCCAATAAAACGACGTCGACAACAGAAAGCAACAACGGCACCGCTGTGAAAAAAAATGCACAAAGCAACGCGAAGGAAAAACATGTAGGAAGCAGCGTAATAGAAAAAAATATACAGAGCGGTAGTATTGTGGTGGAAAAAAAGGCAGCCAACGAAGTAAAGTCAATAAATAACGAATTAATAAAAAACAAACAAGAGTTGGAAAAAGTTTCAAAAACGGAAAACGTAATTGCAGTGCCAAAAGAAGAAAACATCATCCTGACCGCTGAAAAAGTTGAAAACGTGATTATGGTCGTCGACAAGGTAGAGAAAACCGATTCTATGGTAGTGCCGTTGAATAAAATAGAAAAAGTGGAAAACATGGTGTTCCAGACCATAGCGAAAGACTTATTTTTGGGGCAGCAGAAAGAAATTAAGATCACTATACCCGAATACTTCTCCGATAAAAACTTCCAACTGGACAACAGATTTAAACAAGACGATGGGCTTTCCGTGTTATCCGAGATTTGTAGCGCCTTGCCTAGGTTTAACGAACCATATGTGTCCAGTAGACAGCTGTTGAACAAGATGCCGGCGCCCGGAGACAGTAGTTTTGTGAAGTATGTTCCGCCAGCAAACAGCGGAGACGAGAAGCCTCCAGTGTCGACGTTGACGCCACCGTCATTTGAAAGTCGCACCGTCAAAATCGTAAACTTGGCACGTGGCAGCAGCTCGTCCGGGACTAACGACAAAAATGATTTGGGCGCGTCTTGGAAACAGGCGTTCAAGAACATGAAATTACCGAAAAACGGAATCGCCTCAGCTGCTATTTCGGTCGGTAACAACTTGGTTGCTTGGACTAAAAAGAAACAAAATGACGATCATACACCGCCACCAAAGACATACACTAATGGTATTGATGGCGGCAGCGATAATGGTGGTGAAAAAGAAATAATTTCCAATAGTAATTTGATGACAAATACTCTTCAGTCATCACTGGTTAATGGTACCACGGAAAAAAAATCTGTACCTTCATATAAATGCCAAAAAACTTGCTGTGGTGAATCTAAAACCATCGAAATGTTGGACTGCAAAAGGACGGTGCCGACATCGGCCCCAAACACCGCGTCCTATTTGGCTAAAACGACTATACTGAACAGTACGAAGTATGATTTAAAATTTGAAAAACGTTCTTCATTGGCTACAACGGCAACTACGGCAGCGCCCATCAGCTTAGAAAAACAACAACAAATACGCAAAGACGTCGTGGGTGATGTATTGTCTTCAGACGACCAGAGTCCGGAGAAGAAGATATTCCACCAACGACGGCTATCTACCACACAATCGTGTAGCGGAAACAGTTCCGATGCTTTTTCACCTGATAACGAGACGAGTGTCTATGCTTTCCAGCCTGACTTGCCGATAGCTAGTACCCCTTTCCGCCGGAACAAACCCCAATCGCCCGCAAAGTCCAGGACGGTTTCGCCCAACACATCAATTGCTGTAAGTATTGAAAACGATTCTATGGAAGAAAAATCTCATCAGTCCACTATGTCGTCGACGACTACAGATGTCGATAGTGAGGAAGGACGGCTGTTTTATATTCCGTTACCGGCTGGTGTCCGGGCACAGCCGATGATCCAGGGTGTTACAGTTAAGCTGGGCACGGAAGGACCACAAAAAAAATTAGTGATGAGCGCTAAGCTGGTAACCAAACCCCCGGCATCTACAATACCAGTCAGTTCTATATCACCAAAACCCGAGCGGAAAATCAAACCACTGTGCACGACAAAAATAACCAACAGCACAACCCCCGTCGGCACTGTGCAACCAACCACTAGAACTATTCAGCCCCCAAAGTGTAGCCCCTCAACTTCAAAACAAGTGTTATCATTACCGCCACAGCTACAAATTCTAGAAACGAAAGAGAAAGACGATAAAAAACGGTTACAACAGATCACAACTACTAATTCTACTACTACTGCCATTACTTCTGCTAAGGAAACAAAAAAATCGTCATTATCGTCCTCCCCATCCACCATTAATAACAAGAAACAAAAAAAGACTGAAAAACTAGTTAACAATAAGAGGAAGTCTAGTGAAAAAGTTGCTTCAAAAAAGAAATTAGCAAAAGAGCATGCCGACATGTTGGATGGGCCAACATTTTATCCGTCCGAAGAAGACTTCAATGATCCTTTAGCATATTTCGAAATCGTCAAACCCGTTGCTCAAAAATACGGTATATGCAGAGTCGTGCCTCCGCCTAGTTTCAAGCCGGAATGTAAAGTCAGCGACGACATGCGTTTCACGGCATACAACCAGTATGTACACAAGATGATGAACCGTTGGGGTCCAAACGTCCGTGAAATGATGGCTATAAAAAAATATCTGGAAACGCAATCAATAGTCTTGTCCAATCCACCACTCATCGGTGGCATGGAACTGGACTTACCCAAGCTGTACCATACGGTACAGGAGCTCGGTGGACTCAAAGAAGTGATAGAGCTGGACAAATGGGGTCGTGTTGCTGACCTGATGAAAATCCCGAAGAGTGCTCAAGACCGTATTACAAAACTCGATGACATTTACTGCAAATATTTGTTGCCATACGATACGCTCTCACATGACGAACGGCAAAAGTTGATTGCAGAGGTGGACAAAGAGTGGAAACAGATCTGCAAGAAAGGCGACATTGATGATGATCTGTATGAAGATGTTAATGATTGTATAGCTAAGGGTCGAAGTATCGCATTAAACGCCTATTACCGTGTTGCACGCAACACCATTGCCATGTGGTTCAAGGAACAGCAACAACAACAACAACCATCAGGGAGTCACTCGTCGTCGACATCGGCTGCGGCAGCAGCAGTGATCCTGGCTGAAGACGTTGAATCACTTTATTGGAAAAACGTGCAGGACAGGAAAAACCATATATGTGTTTTGTCTGGTTCGATCGACTCGGGTGCTGAGGGCTATGGGTTTCCAACGACGAAGACTGCCACGTTTACCAAACACCCGTGGAACCTGAAGGTGCTCACCAACAACCCAGTGTCTGTGCTTAAGTCGCTAGGCCCGGTGATGGGCATGACCGTGCCCACCATACATATGGGCATGGTGTTCTCGGCATGCTGCTGGTACAAGGATCCACATGGGCTACCGTGGATCGAGTATCTGCATACCGGTGCAGACAAAGTGTGGTATGGCGTTCCATCTAGCCAAAGTGACCGGTTCCGGGCAGCCATGAAGCGCTTGCTTCCGCGAGCTGTGGCTGAAGGTCAGAATCATCACACATGGCTGGCCGCAGACAGCGGTATGGTGCCACCCAACCGGTTGCTCGAGCACGGTGTCACGCTCACCCGGACCGTACAAAAGCCAGGACAGTTCCTCATTGTCATGCCACGTGCTTACACGTGCAATGTGTCCACTGGTTATGTTATATCCGAGAGCGTCTACTTTACGCAGCCAGGTTGGCTCGATGGTGCCGAAAAGATTTTCCAGGACTTGCAGAAAAATTGTGAACCCGCTGCCTTTTCATTTGAGAAGCTACTGATAAACATGTCTACAGATTCGCGTACACCTCAAAACATTCTGAAACAGCTGTTAAATATGTTGAGCAACATGAGAGACTGTGAAGTAGCACTTAGAAGTCAGCTGGTGGAAGATTTAGGCCTAAAGGTGTCTGAACGCATTCAGCCCACAACATCCAAATCAAATGAGCATAACGAAGACTATGAGTGTGACGTGTGCCATTCAATTCTTTACATATCAATGGTAAACAACTCGCATGAAGACTGTGACTATTGCTTGAGACATGGCATTGAGATTTTATCGAAAAAACACAATCAACTCAAGTATTGCAAGTTTTTATACACTTATGACGAGACTGATTTGGATAGAATATTAGTAAAACTTCGTGAAAGAATCGATTCAAAAAAAAAGAAGACATCTACCAAAAGTTGA
Protein Sequence
MSSNGSDAKKRKLLNNEEAILESSTKKIKVQAQRKFAQNAVISTSTAQKPIQTLVVPNNVTKPPVKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSSQEIAAGKKRRKSTPILPVTNANNTYNVNSVNNESIERKNISQLPQTKFPLSKLGQKVMGRKLVRSSSRYTVRQEALTLRQLALRHVPKIKKSLSKVVKPLVNENIKKITEKNGKQVSLDGKQIQKLKGRITRSNSLPSIFCPAINQLRDDKGKWCKGSCSNKSSSKTSDDLKDVEEERPSRKKTASNNLDHRSNSLGNMKRKTSIAKCKVANKNNRKTRSLTSKHKSSDQDNYVVPDKKCDKNLKTVSKSNKANSLIETKLTVDVKRRTSSVDNIKAIRESKDIINSTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDDTSSVESFPELPNTRINEQRERELKVFSKQQVEQKLCEKKDDKPLSQGIDTKKTKLIDKNKVNKLKKKVEVKILEKKKAKEFIETINFTENSGTTLFKRNLRPRRSSTMLDDYIMTDSDEDDIKCEPVIEVKKCEAPKPLTKTTTMAGESKSQKCKLSTDESVKKNLKINKTDLKSKKDLNKDSEVKKSLSETKSKSILLRDKELEINKNKNDTVDKKNEKSSKNKTEIVVITKEPKTAGTGSKNAGKKVPLPKQQTTKKDNALNKKKPNLDLYNNNNNNNNKKKRSSSSSSMMSPSSSMFSGITSQTKEELLERMAANFDAKSTVCEGAEKLANKTTSTTESNNGTAVKKNAQSNAKEKHVGSSVIEKNIQSGSIVVEKKAANEVKSINNELIKNKQELEKVSKTENVIAVPKEENIILTAEKVENVIMVVDKVEKTDSMVVPLNKIEKVENMVFQTIAKDLFLGQQKEIKITIPEYFSDKNFQLDNRFKQDDGLSVLSEICSALPRFNEPYVSSRQLLNKMPAPGDSSFVKYVPPANSGDEKPPVSTLTPPSFESRTVKIVNLARGSSSSGTNDKNDLGASWKQAFKNMKLPKNGIASAAISVGNNLVAWTKKKQNDDHTPPPKTYTNGIDGGSDNGGEKEIISNSNLMTNTLQSSLVNGTTEKKSVPSYKCQKTCCGESKTIEMLDCKRTVPTSAPNTASYLAKTTILNSTKYDLKFEKRSSLATTATTAAPISLEKQQQIRKDVVGDVLSSDDQSPEKKIFHQRRLSTTQSCSGNSSDAFSPDNETSVYAFQPDLPIASTPFRRNKPQSPAKSRTVSPNTSIAVSIENDSMEEKSHQSTMSSTTTDVDSEEGRLFYIPLPAGVRAQPMIQGVTVKLGTEGPQKKLVMSAKLVTKPPASTIPVSSISPKPERKIKPLCTTKITNSTTPVGTVQPTTRTIQPPKCSPSTSKQVLSLPPQLQILETKEKDDKKRLQQITTTNSTTTAITSAKETKKSSLSSSPSTINNKKQKKTEKLVNNKRKSSEKVASKKKLAKEHADMLDGPTFYPSEEDFNDPLAYFEIVKPVAQKYGICRVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMMAIKKYLETQSIVLSNPPLIGGMELDLPKLYHTVQELGGLKEVIELDKWGRVADLMKIPKSAQDRITKLDDIYCKYLLPYDTLSHDERQKLIAEVDKEWKQICKKGDIDDDLYEDVNDCIAKGRSIALNAYYRVARNTIAMWFKEQQQQQQPSGSHSSSTSAAAAAVILAEDVESLYWKNVQDRKNHICVLSGSIDSGAEGYGFPTTKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPSSQSDRFRAAMKRLLPRAVAEGQNHHTWLAADSGMVPPNRLLEHGVTLTRTVQKPGQFLIVMPRAYTCNVSTGYVISESVYFTQPGWLDGAEKIFQDLQKNCEPAAFSFEKLLINMSTDSRTPQNILKQLLNMLSNMRDCEVALRSQLVEDLGLKVSERIQPTTSKSNEHNEDYECDVCHSILYISMVNNSHEDCDYCLRHGIEILSKKHNQLKYCKFLYTYDETDLDRILVKLRERIDSKKKKTSTKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00134026;
90% Identity
-
80% Identity
-