Pmus013294.1
Basic Information
- Insect
- Pelosia muscerda
- Gene Symbol
- -
- Assembly
- GCA_963691645.1
- Location
- OY829111.1:7064145-7065137[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-11 1.8e-08 34.5 0.0 2 38 16 52 15 58 0.91
Sequence Information
- Coding Sequence
- atggTTAACAACTATAAAAGGAAGTCGGACAGGCAATCCTGGCGTGAGGAGGACAtgaaaaatgccattgaaaaaGTAGCTACGCGCAAAATGGGGCTTAACAAAGCGGCCGCCACATTTAATGTTCCAAAGACTACATTAATAAGAAGACTTACCAAATATGAGAGCACCAAAGACTTAACTGTAGCTACGGAAAAGAAAATGGGCAGGTATGAAAAGGTGTTTAATGTCGATCAAGAGAGAGAACTAGCATCCTATGTCAAAAATATGGAAAATCGCTTTTTTGGTTTAACCACAAAGGATCTCAGGCGTCTCGCATATGAGCTAgccgaaaaaaataaattgcaacACAGTTTCTGTCACGAGACGAAAATGGCGAGAAGAATATGGCTCGAAAATTTCTTAAAGCGTAATACGGACTTAAGTCTGCGAAAACCCGAACCGACTTCAGCAGCTCGAGCGTCTGGCTTCAACCAAGTTCAAGTTAAACGATTTTTCGATTTGTTGACAGACATTACAACAAAGTATAAATTGACACCCGATCGAATATTTAATGTCGATGAAACGGGCATGACAACTGTTCCAAAAAGTATGCCTCGGATTGTTGGTACAAAAGTAAAGAAACAGGTGGGGTTATTAACATCTGCTGAGCGCGGCCAGCTTGTCACTGTTGTTTGCTGCTTTGGTGCGGACGGGTCTTACATGCCTCCCTTATTCGTGTTCCCTCGTAAAAGGATGAAACCCGAATTGATGCTAAATGCTCCACGAGGATCTTCGGCGTTTTGTCATGAAAGCGGGTGGATTCAAAAAGATATTTTCACAGAGTGGTTCAAGAAGTTCATCAAATTTTCAAGAGCGTCAGTCGATAATCCAGTCTTGCTTTTGCTTGATGGGCATGCCAGCCACATGAAAAATATGGAAGTTATCGATTTAGGACGGGTCAACGGCGTGCATGTGCTTTCATTTCCGCCTCACTGCACACATAGCTTATGA
- Protein Sequence
- MVNNYKRKSDRQSWREEDMKNAIEKVATRKMGLNKAAATFNVPKTTLIRRLTKYESTKDLTVATEKKMGRYEKVFNVDQERELASYVKNMENRFFGLTTKDLRRLAYELAEKNKLQHSFCHETKMARRIWLENFLKRNTDLSLRKPEPTSAARASGFNQVQVKRFFDLLTDITTKYKLTPDRIFNVDETGMTTVPKSMPRIVGTKVKKQVGLLTSAERGQLVTVVCCFGADGSYMPPLFVFPRKRMKPELMLNAPRGSSAFCHESGWIQKDIFTEWFKKFIKFSRASVDNPVLLLLDGHASHMKNMEVIDLGRVNGVHVLSFPPHCTHSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091754;
- 90% Identity
- iTF_01091754; iTF_01083257; iTF_01083256; iTF_00761568;
- 80% Identity
- -