Pinf035782.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963921195.1
- Location
- OY992540.1:20528560-20538934[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 4.7e+04 -12.2 20.9 35 168 10 146 3 160 0.63 2 4 0.17 7.9e+03 -2.8 3.1 25 45 188 211 180 270 0.48 3 4 5.9e-117 2.8e-112 376.3 28.0 1 299 308 599 308 600 0.95 4 4 0.065 3.1e+03 -1.5 3.7 220 245 628 653 603 674 0.47
Sequence Information
- Coding Sequence
- ATGTCAGTAGAACAAAAATTAACTGATAAAAATGTGGTAGCAAATTCGAATTCCTCTACAAAAAGTAAaaagaacaacaacaacaatagcaATAACAAAAAAGTCATTAAAAAATCATTGAAGTCGAAAAGTaagaaaaacaacagcaacaataatatcagcaacaacaacaataccGAAGTTAATAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACTGATTTAAAAGAACTTAATGCAAACGAAGGCAATGACAAAAACAATATCAGTAATAAGGTGTTAATAAACGAAAAACCAAAAGAAGAATTAAATGATAATTATGATCAGAAAGAGTTGCAGGAGGAGGAGGAGGGAAGATTGCATTTGCTAAATACAAATATAAATGATAACGAAGTCGTAGAACAACACCAACAACAGGTGGGAGAACTTTTATCAATTGATAACAATGATAAAAACGAAGAACTAAAAGAAATAACGACGACAATGACTTTAAATTCAACTACGACGACTAATATTAATGTCGGCGGCAACGGAAATGAagataatgaagaaaaaaataacaaaaaccaacaACAGCAACAAGAATCACAAAATAAATCCATAAATGAAGATATAATTTGTAATGATGATAAAACGTCAACTACACTGGGGGAAACCACCATTACTTCCACCGATGTTTGTGATAATACTACCGCCATAGAAAAAGTCCATTCACCGGGACAAGATAAAAATGACATGCCATCATCATCTTCTTCAGACATACAATCTAAACAAATAAGCAATAAAACAGCAAATAAAGAAAGTAATTACTGCGAAAATCATGCTGCTGATGACAATGGCATGGATGATGAAGAATATGCCGAACCATATGATGAATTTTTAGTTCAGTTCCTAGACGAAGCAAATCACATTGCTGAAGCAAGATTAGCTGCCAGAAGGCAAGCAAGAGCTGAGGCTCGAGAAATACGAATGAGAGAATTAGAACGTCAGCAAAAAGATCAAGAATCGAATGCTGATAGAGTATTTGATATGACAAATCATTTGCCCCACATGCGACTGGGTATTAGCAGTTCACCCGCAGTTAGTGGTTTATTAAATTCCACGCGAGGAAACTCAATGTCATCCAGACGCAGTAGTGAAGATTCTCTGGAAGAGGAAGGCCGCAGTTTAAGAGATATACGTCATGAATTAAAGgacGTAGAAGAACGGTTTCGTAAGGCCATGATAGCCAATGCTCAACTGGATAACGATCGTGCCTCACAAACTTATCAAATTCAATTGCTTAAAGACAAGCTAGAAGATATGGAAGAATCTTTTGCACAGTTACAGCGTGAATGCAAGGAAAAAACCCGTGACTGTAATGCGCTGAAACGTTCATTGGACAAATTAAGTGAAGAACTTAAACTTGTTCAGGGTCAGCTAAATGAACGTGACACACTTATAGCGGAGCAGGGTCTAGTTATAGTGGCAGTTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTagATGTTCGACTTAAGAAATTTAGTGAAGAGAAACAACAACTGCATGCCGAAGTACAACATTTGCAGGAACAGTTAGAAACATATAAAAGTCAAGGCAAGGGTAGAGGAAAAGGCAATTCTTCAAATGGTCCTTTAGGTTCAGACGATGATGATTATGAAGCTCAAAGAGAAGCTAACAAAATTATATCGGACTATAAATATAAATTACAAAAAGCTGAACAAGAAATTGCTAGTCTACAATCAAGTTTAGCACGTTCAGAAACACAAGTTATACGTTACAAAAGTACAGCCGAAGCAGCAGAAAAAGCGGAAGCTGAACTTAAAATTGAAAGGAGGAAACTACAACGAGAGaatCGTGAGGCAATGGAAAAACTCGAAGAATTAGAAACATCAAATAATCATTTACTGAAACGTTTGGACAAATTAAAGAATGCCAAGAGCGCTTTGCTTAAGGATCTCTGA
- Protein Sequence
- MSVEQKLTDKNVVANSNSSTKSKKNNNNNSNNKKVIKKSLKSKSKKNNSNNNISNNNNTEVNNDEIIEELFDFSDTDLKELNANEGNDKNNISNKVLINEKPKEELNDNYDQKELQEEEEGRLHLLNTNINDNEVVEQHQQQVGELLSIDNNDKNEELKEITTTMTLNSTTTTNINVGGNGNEDNEEKNNKNQQQQQESQNKSINEDIICNDDKTSTTLGETTITSTDVCDNTTAIEKVHSPGQDKNDMPSSSSSDIQSKQISNKTANKESNYCENHAADDNGMDDEEYAEPYDEFLVQFLDEANHIAEARLAARRQARAEAREIRMRELERQQKDQESNADRVFDMTNHLPHMRLGISSSPAVSGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESFAQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLHAEVQHLQEQLETYKSQGKGRGKGNSSNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -