Pinf039674.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- RCOR3
- Assembly
- GCA_963921195.1
- Location
- OY992540.1:161750544-161772998[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.9e-10 2.9e-06 28.6 0.0 3 46 60 103 58 103 0.97 2 3 0.94 2.8e+03 -0.1 0.2 33 44 259 270 250 271 0.73 3 3 2.4e-12 6.9e-09 37.0 0.0 3 45 370 412 369 413 0.97
Sequence Information
- Coding Sequence
- ATGGATGTTTACCataataaaataaatttatacaaaattacaGTTGAGGAATACATATCAGTTGCCAAAGAGAAATATGGTTATAATGGTGAACAAGCCTTGGGTATGTTATTCTGGCACAAACATGATTTAGAAAGAGCCGTAATGGATTTGGCCAACTTTACACCATTTCCCGATGAATGGACAGTAGAAGATAAAGTTCTTTTTGAACAAGCATTTCAATTTCATGGCAAGAGTTTTCATCGTATACGACAAATGTTGCCTGATAAATCAATTGCTAGCTTGGTTAAGTATTATTATTCATGGAAAAAGACACGACATCGTCAAAGTGTTATGGATCGTCAGGAAAAAGTTAAAGCTAACAAAGAAGGTGGTTCTTCAGAAAACGGCAGTGACAATGGCAGTAATGAAGAATCTGACAATGATGACAAGGAACAGACATTATCATCATTACAAACAGGAAATTTAAATGATCAAACAAATGATTCCAATCATATTAACAATATTGAAGTTGGTGCGCTTGGTGTTGGCGGTGGCATGGGCGTTGCTAATGAAACCGAAACAAATCATATTTCAAATAATATTGCCAATAAACTACAGCTACAACAATTACAAACACCGTCCCTTACAAATTCCGATTCAATAAATTCCAATGGTATCGCAAATGCCATCGCTAACAATTCGTCTATACCTTCCACCTCTGCTATAATGGCTGCCGGTTATTGTTCAAATTGTGGCGTTGTCTGTAATATATTAAATAGTTCGCCCCATGGTAAACTGTGTTCCAGTTGCCATCATCATTGGAGACGCACTGGCAATAAACGTCCCACTTCGGGCCCATATTTTGGCAAAAGATCTCGGGACCGTAATGCTGAACGTCATAAACGTAAACCGCCACGTGGCATGTATATAAATCATGATGATATTGTTGCTTTGGCCAGTGCAAATGATAATCAAGATGAATTACTGGCAAATGTTGATCGTGAAATTGTTTCCTTATTAAGTCAAGTACAGTTGAATAAACAAAATATCTCAgcattaaaacgtaaaaattcagacaatttggaAGAAATGCGTCCAAGTGAAAATATAAATCGTATAAATGCACGATGGACTAATGATGAAACTTTATTGGCCGTACAGGGTGTACGAAAATATGGCAAAGATTTtcagGCAATTGCTGAAACGCTTGGCACCAAAACTGAAGCTCAtgttaaaactttttatattaataatcgACGTCGTTATAATTTAGATCAAATTATTAAGAAACATGAAGCCGAAAAGGAAACAAATGCCCCGGCTACATTAAATACTAACACATCTTCATCCTCATCATCAACATATTCGAATGCCACTAATAATAACAACAATTCCACCTCCACAAATGTTGAACATATTAAAAAAGACGAAGTACAGTCATCATCTCAAGTGAAGAAGAAAGATATTATCGTACCTAATAGTGTTAATGAAGAATCTGATAATACAACATCAAGCGAAACGGCTATTTCAAAATCAACGATTTCCACCTTTACCAATACAACAGAAGAACGTAAAAGTGAAAGTAGTTTAAGTGGCGTTACAACAAAGGACAATATTATATTGGAGatTGATTTAGATGCTGATCAATCGGAGACACAACCACCTCCAGCCAAAAAGATTGCCTTAAGTGTTTCAAATCAGGAATTTCCTAAAGCAAGTCCTATTTAA
- Protein Sequence
- MDVYHNKINLYKITVEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRQSVMDRQEKVKANKEGGSSENGSDNGSNEESDNDDKEQTLSSLQTGNLNDQTNDSNHINNIEVGALGVGGGMGVANETETNHISNNIANKLQLQQLQTPSLTNSDSINSNGIANAIANNSSIPSTSAIMAAGYCSNCGVVCNILNSSPHGKLCSSCHHHWRRTGNKRPTSGPYFGKRSRDRNAERHKRKPPRGMYINHDDIVALASANDNQDELLANVDREIVSLLSQVQLNKQNISALKRKNSDNLEEMRPSENINRINARWTNDETLLAVQGVRKYGKDFQAIAETLGTKTEAHVKTFYINNRRRYNLDQIIKKHEAEKETNAPATLNTNTSSSSSSTYSNATNNNNNSTSTNVEHIKKDEVQSSSQVKKKDIIVPNSVNEESDNTTSSETAISKSTISTFTNTTEERKSESSLSGVTTKDNIILEIDLDADQSETQPPPAKKIALSVSNQEFPKASPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00892668;
- 90% Identity
- -
- 80% Identity
- -