Lobt034420.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- RCOR3
- Assembly
- GCA_949987735.1
- Location
- OX465297.1:84961468-85002557[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.6e-10 3.6e-06 28.8 0.0 3 46 25 68 23 68 0.97 2 3 0.92 3.4e+03 -0.0 0.2 33 44 222 233 213 234 0.73 3 3 3e-12 1.1e-08 36.8 0.0 3 45 333 375 332 376 0.97
Sequence Information
- Coding Sequence
- ATGTTATTCTGGCACAAACATGATTTAGAAAGAGCTGTTATGGATTTGGCCAACTTTACACCATTTCCCGATGAATGGACTGTTGAAGATAAAGTTTTATTTGAACAAGCATTTCAATTTCATGGCAAAAGTTTTCATCGTATACGACAAatgTTGCCCGATAAATCAATTGCCAGTTTGGTTAAATATTATTATTCATGGAAAAAGTCAAGACATCGTCTAAGTGTTATGGATCGCCAGGAAAAGGTAAAAGCCAACAAAGAAGGTGGCTCTTCAGAGAATGGCAGTGACAATGGCAGTAATGAAGAGTCTGACAATGATGACAAGGAACAAGCCTTATCATCGTTGCAAACAGGAAATTCAAACGATCAAACAAATGATTCCAATCATATTGTTAACAATAATGAAATTGGTGGTGGTGGTGGAATCGTTGGCGTTGAATCGGATACAAATCatatttcaaataatattaCCAATAAATTACAGCTGCAACAATTACAAACAACTCCGTCCCTTACCAATTCCGATTCAATAAATTCTAACGGTATCAATAATGCCATCACAAATCATGCGTCTATAATTTCCTCCTCGTCAACCAGTGCCGCCGGTTATTGTTCAAATTGTGGTGTTGTCTGTAACATATTGAATAGTTCACCTCATGGTAAACTATGTTCCAGTTGTCATCATCACTGGAGACGCACTGGCAATAAACGTCCCACATCCGGTCCTTATTTTGGCAAAAGATCTCGCGACCGTAATGCTGAACGTCATAAACGTAAACCGCCCAGGGGCATGTATATAAATCATGATGATATTGTTGCTTTGGCCAGTGCAAATGATAATCAAGATGAATTACTGTCAAATATTGATCGTGAAATCATTTCCTTATTAAGTCAAGTACAGTTGAATAAACAAAATATGTCAGCATTAAAACGTAAAAACTCTGATAATTTGGAAGAAATACGTCCAAATGAAAATACAAATCGTATAAATGCACGATGGACAAATGATGAAATTTTATTGGCCGTACAGGGAGTACGTAAATATGGTAAAGATTTCCAGGCAATTGCTGAAACACTTGGCACTAAAACAGAAGCTCATGTAAAAACTTTTTATGTAAACAATCGTCGTCGTTACAATTTAGatcaaattataaaaaaaattgaggcCGAAAAGGAAGCAACTGCTTCATCCACCACCACCAATTCATTGTCATCATCTTCCAATGCCACCAACAGCAACTCCACAAATGTTGATGCTATTAGCAGCAGCATTGGCAAAAAAGATGAAGTACATTCGTCGTCATCGTTGTCATCTCATTTAAAAAAGAAAGACATCGTACCTAATTGTTTAAATGAGGAATCTGATAATACAACATCTAGCGAAACGGCTATTTCAAAATCCACAATTTCCACCATTACCAATATAACAGAGGAGCGTAAAAGTGAAAGTAGTTTAAGTGGCATTACCACAAAGGATAACATTATATTAGAGATTGATTTAGATGCTGAACAACCAGAGATTCAACAACCTTCAGCCAAAAAGATTGCCTTGAGTGTTTCAAATCAGGATTTTCCTAAAGGAAGTCCTGTCTAA
- Protein Sequence
- MLFWHKHDLERAVMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKSRHRLSVMDRQEKVKANKEGGSSENGSDNGSNEESDNDDKEQALSSLQTGNSNDQTNDSNHIVNNNEIGGGGGIVGVESDTNHISNNITNKLQLQQLQTTPSLTNSDSINSNGINNAITNHASIISSSSTSAAGYCSNCGVVCNILNSSPHGKLCSSCHHHWRRTGNKRPTSGPYFGKRSRDRNAERHKRKPPRGMYINHDDIVALASANDNQDELLSNIDREIISLLSQVQLNKQNMSALKRKNSDNLEEIRPNENTNRINARWTNDEILLAVQGVRKYGKDFQAIAETLGTKTEAHVKTFYVNNRRRYNLDQIIKKIEAEKEATASSTTTNSLSSSSNATNSNSTNVDAISSSIGKKDEVHSSSSLSSHLKKKDIVPNCLNEESDNTTSSETAISKSTISTITNITEERKSESSLSGITTKDNIILEIDLDAEQPEIQQPSAKKIALSVSNQDFPKGSPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01165466; iTF_00716573;
- 90% Identity
- iTF_00716573;
- 80% Identity
- -