Pinf003964.1
Basic Information
- Insect
- Pegoplata infirma
- Gene Symbol
- Rel
- Assembly
- GCA_963921195.1
- Location
- OY992536.1:51516113-51524847[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-51 3.1e-47 162.1 1.1 1 168 143 325 143 326 0.95 2 2 1.5 1.2e+04 -2.6 0.1 89 129 777 819 772 841 0.69
Sequence Information
- Coding Sequence
- atgttgccacattaTTTTCCATCATCATCAACACATGACAAGGATATTGTCGATTTGGATACAAAAGAAAGAATTAGATACATGAGTGAATCGTCAATGTCTGGTACTAGTGGATATAATACCTCACCAGGACCCGGTAATTCATCACCTAGTTCATCGGGATATTCTCCAGTTCAATCTCCAGCTTCGGTATTACAGGCGGATTTTTCCAATTTAACTCTACCGCCCGGATCCATCATATCGTATCAACACCAAAATTCGCCCCAATATGTACAATTACAAAATATACAAATGACCAACAATATGACGACAGCAAACATATATGCAAATGATAACCTTACTGTTAATTATAGTTTTGGAAATCAAATAAATTATCAATCAATACAATCCTCCCAAAATGGTGTCAAACAAGAATATGAAGCTTCATTACGTATTGCCGAACAGCCGGTGGAAAAATTTAGATTTCGTTACAAGTCGGAAATGCACGGTACCCATGGTTCCCTGAATGGCACTAATTCACAAAGAAACACAAAAAGTTTTCCTGAAGTAGAACTTTGTAATTATAAAGGTCCAGCCATTATTCGATGCAGTCTTTATCAGACAAATCTTGACAGTCCCCACTCGCATCAGTTGGTAGTACGTAAAGACGATCATGATATATGTGATCCACATGAGATTAAATTATGCCAGGAAGTGGGTTACTTTGCAGAATTCAAAAATATGGGTATAATACATACGGCTAAGAAATTCATAGTACAAGAGTTACTAAAAAAGAAGCGAAAACGTTTACAATTTGAATTGGGTCGTGATGAGTTGACGGTTAAAGAAGAGCAGGAGTTGCATAAACAAACGGAAAAAGAAGCCAAGGATATGAATTTGAATCAGGTGCGTTTATGCTTTGAAGCTTTTCGTATTGAAGACAACAACTTTTATACACCAATTGCTGCTCCCGTGTATTCTAATCCAATAAATAATCGGAAGTCAGCACAAACAGGAGAATTACGTATAACACGTTTAAGTATTGCAACCGGCAATGTGGCCGGTGGTGATGATCTTATATTATTGGTGgaaaaagttagtaaaaaaaatattaaagtacgTTTCTTTGAAATGAACGATGATGAACAAGTATGGGAATCCTTTGCAACATTTCGAGAATCGGATGTGCATCATCAATATGCTATTATATGTAGAACACCAGCTTACAAAGATAAAAATATAGACAAATCTGTAGAGGTATTTATAGAGCTTGTAAGGCCTTCAGATGATGAGCGTAGCTTTCCAGCAGTGTCATTTCGTTATAAGCCAAGTGATGCCGTCATATCACGCAAACGTAGAAGAACTTGTTCTTCAGTATCCAGTTCATCATCAAGCAACAACTCTGGGTCTTTAAGTTCAGGTGAAATACCAAAAACAGTACAAGAACAACAAAATTCTGGTGTAGATGTGTCAAGAATAGTATCTGAAGAACTTAATCGTTTAATAAATGATCCAGAATTAAAACAGAAATCAACAAATTTATCAGATATTCAAAATCTCTTAGATTTTTTAGATAATAGTAATGATACTATTATGATGAGTAACGATGATATGGTTATTGGTGCACCTGCCGGAAGAGGTCGTACTGAAAAAGATGGATGTGTTACAGATACAACAAAATCATCATTGttgcattataaaaaattaatgattagcAAAAAGCTAATGGATACTGCTAACGCAGCTGGACAAAATTCCTCACAACTTCCTATCAATTCCTATATAcaacgaattttaaaaatttatgctGATAGTAGATCTGATATGCCACTCAATGACACAAAATTAACAAGTGCTGCTGAACAAATAACCAAAATATTTTATGAACATTATGAAAGGAACAAGGAATCTTTAATACATGAAATCGTGGTCAATGATAATAATAAATTAGCTATacctttatttaaaattttggaatattttaaattaaatcatCTTTTAAATATCATCCTAAATGAACATAATCAGAATGCATTACATTATGCATGTCTTCACGACCGCTCCCATTATATACGTCCTTTGTTGAGATTGGGTTGTAACGCTAATTTACAAGATACTAAAGGCGATACTGCTCTACATATTGCAGTACGCGAAAACCACCTCAAGTGTGTAGAAAGTTTTATAATTTCTCAAAAGACCATAAAATTGAATATGTTAAATGATGATGGTTTTACTTCGTTACATTTGGCAATACgggaaaataattttgaaattgcagaaaaattattaaaatatgatGGAACTATAGCAGCTGTCGGTAATAGTAAAGATGGTAATAATGCTTTACATATGGTAATACAACAACAAAatctaaaattattaaatttagtcCTGGATAAATCAAATATTACATCAATACTAAATGCCCGAAATACGGCAGGAAATACACCACTTGAAATGGCCAAACAATTGGCATCAAGTAGTAAACAAGCACAAGAAATTTTATCAATACTTTTAACACATAACAAAATCACTTCTACAAACTCCATCTCTTCGGCATCCTCCTTTTTGTCTAGTAGCAACAATAGTAGTAGACTATCTATGGATGATGGTGGCGGCggtggtgatgatgatgatggaaaACTTATTATAAAAGAGGAAGAAAACTCTTGTTCCTCCACCGAGGACGATGATGATGACAACAGTAGTATTGGACCTATGGTTACCCTACCATCGGGTTCTATTATGTTACAAGAAATTGATATTAAACAAGAAAATAGCGAAGAATATTTTGAATTATCTGATTTAGAAGCAGCGTTAAATAGTAAAGACATTTTTACTGAATTATGCCAGCAATTGAATGTGGATCAACGTTGGAGGAAATTGGCGGAAAAACTAAAtatgattagtttttatttaacaaatgctGAGGGATTACTTATCAAAATTAAACGTAATATTCAAACTATCGATTGTGCATTGTTTGCATCAGCATTGCAAGATATTGatacaaatttaattaatttaattaagaaacattaa
- Protein Sequence
- MLPHYFPSSSTHDKDIVDLDTKERIRYMSESSMSGTSGYNTSPGPGNSSPSSSGYSPVQSPASVLQADFSNLTLPPGSIISYQHQNSPQYVQLQNIQMTNNMTTANIYANDNLTVNYSFGNQINYQSIQSSQNGVKQEYEASLRIAEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKSFPEVELCNYKGPAIIRCSLYQTNLDSPHSHQLVVRKDDHDICDPHEIKLCQEVGYFAEFKNMGIIHTAKKFIVQELLKKKRKRLQFELGRDELTVKEEQELHKQTEKEAKDMNLNQVRLCFEAFRIEDNNFYTPIAAPVYSNPINNRKSAQTGELRITRLSIATGNVAGGDDLILLVEKVSKKNIKVRFFEMNDDEQVWESFATFRESDVHHQYAIICRTPAYKDKNIDKSVEVFIELVRPSDDERSFPAVSFRYKPSDAVISRKRRRTCSSVSSSSSSNNSGSLSSGEIPKTVQEQQNSGVDVSRIVSEELNRLINDPELKQKSTNLSDIQNLLDFLDNSNDTIMMSNDDMVIGAPAGRGRTEKDGCVTDTTKSSLLHYKKLMISKKLMDTANAAGQNSSQLPINSYIQRILKIYADSRSDMPLNDTKLTSAAEQITKIFYEHYERNKESLIHEIVVNDNNKLAIPLFKILEYFKLNHLLNIILNEHNQNALHYACLHDRSHYIRPLLRLGCNANLQDTKGDTALHIAVRENHLKCVESFIISQKTIKLNMLNDDGFTSLHLAIRENNFEIAEKLLKYDGTIAAVGNSKDGNNALHMVIQQQNLKLLNLVLDKSNITSILNARNTAGNTPLEMAKQLASSSKQAQEILSILLTHNKITSTNSISSASSFLSSSNNSSRLSMDDGGGGGDDDDGKLIIKEEENSCSSTEDDDDDNSSIGPMVTLPSGSIMLQEIDIKQENSEEYFELSDLEAALNSKDIFTELCQQLNVDQRWRKLAEKLNMISFYLTNAEGLLIKIKRNIQTIDCALFASALQDIDTNLINLIKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -