Basic Information

Insect: Pedicia rivosa
Gene Symbol: Hr39
Assembly: GCA_963082725.1
Location: OY720154.1:22913501-22917086[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.3 2.2e+03 -2.0 3.9 130 165 49 83 16 109 0.64

2 5 0.1 7.4e+02 -0.4 7.6 68 151 262 359 156 382 0.60

3 5 1.2e-08 8.6e-05 22.4 0.0 1 26 481 506 481 514 0.90

4 5 0.0052 38 3.8 0.1 66 137 519 590 506 604 0.67

5 5 4.4e-75 3.2e-71 241.2 1.4 188 408 590 799 575 799 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.3	2.2e+03	-2.0	3.9	130	165	49	83	16	109	0.64
2	5	0.1	7.4e+02	-0.4	7.6	68	151	262	359	156	382	0.60
3	5	1.2e-08	8.6e-05	22.4	0.0	1	26	481	506	481	514	0.90
4	5	0.0052	38	3.8	0.1	66	137	519	590	506	604	0.67
5	5	4.4e-75	3.2e-71	241.2	1.4	188	408	590	799	575	799	0.92

Sequence Information

Coding Sequence: ATGGCCGCCACGGGAGGAAGAAGCCCCGGGCGGGGTAATATTTCTGTGACTAGCATTAATTGTGAAGGTCCCAATATATCACAATCTTCCTTAGTTGGTACAacattaataacaaataatgcATCAACAACctcattattatcatcatcatcaacaacaacaataccaGCAACAATATTAACACCATCAttatcatcttcatcatcatcagcaacaatatcatcaacaacaacaacaatatcaacAGCGACATTAACAAATGGAAcacatttttatgaaaattgtgGTGTTAGAATTTCTGTGCCAAAAATGGAAGAATCTGATGAGTCTGAAACTGAATTATCAAATATAGAGAATTCAATAAATGTTGGTTTAAGAGATAATAGAAATAAGGATATACCAAGGCCAATGTCATGGGAAGGTGAATTATCAGAAACAGAAGATAATAATATGATgattgttgaaaatttaaataatgatgattCACAACAATCGTCATCAATGCCGCcagcatcatcatcaattatatttcaacaaaaattaataagtcCAGTGATAAATAATCCGAATGacaaaagaacaacaaatgacaataaaaataatattatgataacaaaagatataaacataaaatcgGAAATAATTGATTCCAATATTATTGGGCAACAATTTTCTGCGAcattattaagtaaaaaatatcaccccgattttattaatttaaaaaatgaaattggtCAACAACCACCACAAActgaaacaaatattattaactcACCATTATTAGCCCGTTCAAAAACAACAATGCTTCCAGCAAACCCAAGCCCAGATTCAGCTATACATTCTATTTATACACATAGTTCACCCAGTCAATCACCATTAACATCGAGGCATACACCGTATACACCATCATTAAGTCGTAATAATAGTGATGCATCACATAGTAGCTGTTATTCATATAGTTCTGAATTTAGTCCAACACATTCCCCAATACAAGGAAGACATTATTTATATGGTGGTACAAcaactttaaataattcaacagCAGCAACTGCAAAtacaacatcatcatcatcaactgGACATCATCAAATATTATATAGGCCTATGTTAGATGGTGGTATTGAGcaaaataatcaatcaataaaatttcaacaaacaaaagaagaaggtTTACTTGAAGGCGAAACTATACCATCAGCTGGGATATCTAgacaacaattaataaatagtcCATGTCCAATATGTGGTGATAAAATATCTGGCTTCCATTATGGAATCTTTTCATGTGAATCTTGTAAAGGGTTTTTTAAACGTACTGtgcaaaatagaaaaaattatgtatgtCTTCGGGGTGCTGGTTGTCCTGTTACAATTGCaacgagaaaaaaatgtcCGGCATGTCGTTTTGAAAAATGTCTAAATAAAGGAATGAAACTTGaagcaATACGTGAAGATAGAACACGTGGAGGCCGATCTACTTATCAATGTTCATATACATTACCCGGCTCAATGTTAAGTCCATCAATTAATTCTGAAACAACAAATAtgtattttaataatcaacGATCACAACATAACAATGGTGGGCTTAAAATGGAATCCCTGGATAGTAATTGCAGTAGTTCaagttataataatattaaattggaAATTCCATCTTTATTACAGGATATCATGGATGTTGAACATTTATGGCATTATAATGAAGCAGAATTATCACGTTTAAATCAGCCACCACCATTAAATCAGTCCAGTAGTGTTGCTACTAATCCATTATTAGCAAGTGCTGGATTATCACAAAATGAGGGCAGTCCTGATTTAATTGCAAATTTATGTAATGTTGCTGATCATCgtctttataaaattgttaaatggTGTAAAAGTTTgccattatttaaaaatatatctATTGATGATCAGATTTGCTTACTAATTAATTCCTGGTgtgagttattattattttcctgtTGTTTTCGTTCAATGTCATCTCCAGGTGAGATACGTATATCATTAGGAAAATCAATAACATTGCAACAAGCGAAGTCTAGTGGATTACagGCCTGTATTGAAAGAATGCTTAATTTAACAGAACATTTAAGACGTCTTAAAGTTGATCGTTATGAATATGTTGCTATGAAAGTAATTGTACTTTTGCAATCAGACACATCAGAATTAAAGGAACCAGAGAAAGTAAGAACTAGTCAGGAAAAAGCATTGCAAGCACTGCAGGCTTATACATTGTCACATTATCCTGAAACACCAGCTAAATTTGGTGAACTTTTGTTACGTATTCCTGAATTACAACGAACATGTcagGTCGGTAAGGAaatgttaattataaaatccAAAGAAGGCgaagaatttaatttactaaTGGAACTTCTTAGAGGTgaacattaa
Protein Sequence: MAATGGRSPGRGNISVTSINCEGPNISQSSLVGTTLITNNASTTSLLSSSSTTTIPATILTPSLSSSSSSATISSTTTTISTATLTNGTHFYENCGVRISVPKMEESDESETELSNIENSINVGLRDNRNKDIPRPMSWEGELSETEDNNMMIVENLNNDDSQQSSSMPPASSSIIFQQKLISPVINNPNDKRTTNDNKNNIMITKDINIKSEIIDSNIIGQQFSATLLSKKYHPDFINLKNEIGQQPPQTETNIINSPLLARSKTTMLPANPSPDSAIHSIYTHSSPSQSPLTSRHTPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHYLYGGTTTLNNSTAATANTTSSSSTGHHQILYRPMLDGGIEQNNQSIKFQQTKEEGLLEGETIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTIATRKKCPACRFEKCLNKGMKLEAIREDRTRGGRSTYQCSYTLPGSMLSPSINSETTNMYFNNQRSQHNNGGLKMESLDSNCSSSSYNNIKLEIPSLLQDIMDVEHLWHYNEAELSRLNQPPPLNQSSSVATNPLLASAGLSQNEGSPDLIANLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSSPGEIRISLGKSITLQQAKSSGLQACIERMLNLTEHLRRLKVDRYEYVAMKVIVLLQSDTSELKEPEKVRTSQEKALQALQAYTLSHYPETPAKFGELLLRIPELQRTCQVGKEMLIIKSKEGEEFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01164034;
90% Identity: iTF_01164034;
80% Identity: iTF_01164034;