Priv013357.1
Basic Information
- Insect
- Pedicia rivosa
- Gene Symbol
- lilli
- Assembly
- GCA_963082725.1
- Location
- OY720154.1:21571905-21592215[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.6e-07 0.0034 17.0 0.2 3 128 11 136 9 181 0.63 2 6 8e-12 1.8e-07 31.1 12.6 348 470 263 381 244 429 0.74 3 6 0.99 2.2e+04 -5.5 15.7 106 261 503 664 440 670 0.44 4 6 0.92 2e+04 -5.4 15.8 78 250 676 850 663 889 0.53 5 6 0.14 3e+03 -2.6 1.7 105 176 916 988 877 1053 0.45 6 6 1 2.2e+04 -5.9 18.7 75 237 1042 1201 989 1237 0.57
Sequence Information
- Coding Sequence
- ATGAAGAAACCACAAAAACCAcgACTAGAAGATGAAAGAGAAGAACGAAGGCAAAGGGATAAACAAGCACGTGCACGGCTATCACAACAGGTACAAAATCCAGATATGGAACCAACAACACCTTTATTTGCTGCTCCTGTTCGTttgagTCCTTCAGAAAGTGATCGTAGAATACAATCAAGACTTGGCGATTTTGCACTAGTTAAACATTTATTAGATGAACCAAAACGTTTTATTGGTATTTCAACAAGTCCAATTATACCAAGATCGGCACCAAATACAACATCTAATTTATCATCATTGTCAACGTCATCTTCATCATTATTATCCTCAGCAGCATTACCAGGATCATCATCTTTAATAGTACCATTATCTGGTAGTAGAAGTTCAACACATCCTCACCATCAAgCGCCTCCACCAAGaccaaattttataaaacctGCCGATAGTAAAACAGCCTATAATGGAAGAGGTGGGAGTGGTTACCCAGGACAATCTATTAAACATGAAACAATTCATTCAAATATTGTACCATCAAAAGGTCAAATATCAGTACCACCTCCTCCATCACAACCAGTAATGATGAATGGTAGaccaaatattaataataataatataaataatattaataataataataatgataataaaccATCCTCATCATCACCAATTATTATTCCAAATGGACGACTTCTACCTCCAAGACCATTTCGATTACCAAAAGATgtaCAAATAAATACAGAATCAAATAATGAGTTAAATACATCAGCAATATTTTCTGGTGGTgctgttgaaaatattttgaaggAAATGGGCACAACATTTGAGCCAATCACAAGCATTGCGGCAACTCCAAGAAAAGAAATGGATTctaaatttccatttaatcAACAACATCCACAACAGCCTCCACATAAGTACACCGACTTCTCTATGTTTAACTCAACAACTAAACAACGAGAACGAAGTACATCGAGACCAACtGAATTAGAAAATGATTTAGATGTTTCTGATAGTGACGGAGAACAAGGAGAACGTAGGAAGCATAATACACTTATAGAACCattattgTCACCACCAAATGATATATCTAGTGAAAGTGGTACAGAATCAATGACAAGTGAGTCATCTAGTGATGCTGAAGAAGCAATTACTGTAACTAAAATAGAAAGAACTGATCAAATAAGTCCATCATCATCAAAGTTAGAACAATGGAATTTAAGTTCATTTGTAAAACCTAGTGTTGAAGTAATACACCCAATACCAGATCCACCACCAACAAATTTAACGATAAAAAATGAACCACACTTAATAAATGATGACGAATTATCACAAGCTGAGGgtacaaatataaatgtatatgaaCAACGACAGAATAATTATGACTATCAAAAtgatacaaaattaataaaagatgaaTCAATTATAAGTCCGACATTATTAAGTCCTGATAAACCATTATCATCTGATACATTTGAATCTGATGAAATTGAAAGTGTTTTAGCTGAAGCTAAACAGATAACAGCAATAAAACCAGTTTCCAGTTTTTCAGataCAGACGATAAATTAGATACTTGTTTAACAAATAAGAAACCAGTAAAAAAACGAAGACGCAatctaatagaaaaaatacCAGCTAGTGATTCAAGTGATGATGATGGTTTTCAAAGTGCAAATATACAATCATCAAGACGTAGTCGTTCAAAATCTGGTGATCATGAAAAGAAGACAAGAGGTAGACCacgtaaaaatattgttgctaaTTTACCGccaccacaacaacaacaacttttaCCACCCACATCAACACCAATTAATATTAGCATAACTAAAaccatttcaaataaaaaagaaactgcCAAAAAAGTTACAGCTAAACGTCGTGCatcacaacaaaatattaatcctaaaAGTCGTGCATTACTTGATACAACATCTGATTCAACAGATAATGAATCAtcgaaaaaatcaacaatattaCGTGATAAAAAACCTGTATCTGAAAGATTAATTCATCCATCACCTAGAAATGTTCCGAAGCCTACTGATgataattcaaattcaatgtCATCACCTTCCAGTCGAGGACATCATTCTTCACGATCAAGAAGATCAATATCACCTATTGTACAAAGAATTTTATCGCCAACAACGAGAAGGCTGCCTACATCATCTAGTAACGATCACACAGATGACAGTGATAGCGATGAATTGGATAAAGAAGATAGAAAACTTCCCGACAAATCTAAAAGtgataagaataaaaatgatacattaagaaaattattctctGGATTTAATAAAGAAGGTGGTGCAAAAGGTAAAGGCGGGCAGGTTTTGGTTGTCTCAGAAGATCCACagactCAAGTAAAAGACGATCATATTcctaatgaaaaattattatcaccTTGTACATCATCATTATCCCGACATAATAGTAATTATGAATTACAACAAACAACACCAAGAAGCACAAGCAATAATTCAactaatataaataataaccaattaataaatgacaccaatataaatataaatctaaataatagtaattttaatataaaaaataatacaatacaACAAGTAATGTGCCGTATCGATTTAAATCGATTAATACGAATACCATTCCCATCagaaattatacaaaatacaacaacagcaacaacatcatcattatcGTATCATGATAAAAGCCctattgaattaataaaaacaagagtttctaatcaaaatcaattaataaatagtaATAACATTAACGAACGTTTAATAAAAAGTCCTGCATCATGGACagcagcaacaataacaacaacaaatcgtAATCGTAACAGTAATCAATTAATTGATGAtgatagattaataaatacaaaggaaaataatcaaaattataatgaaaaaattataataaattctagattaattaataatgatacaataaatacgttaaataataataaaacaataaatcaacgtgatgataatttaaataatgaaaatggacgtcttaattgtaataattatttatataataatagtaataataatataaatacagTTGATAATCGATTAGCGAGTAttgaacaacaaataatagcaacaacaacatcagcaACAACAGTAACATCAACCGGAACAACGCGTAATAATCGTGAATTTTCACAATATAATTCAccaaaaaattatgatgataaacaacaattattaaataaaaatacaacaacaacagcgtcaacaataataaccacaccaacatcatcatcaaataataatagtaatagtaataatataaaaaaagaaacaattaaaaccgaatttacaaataattcagattataataattataataatacaataatatcaCCAAAAACACTTTCATCTGATGataaagttataaattataataataataataaattaaataataataatacgataaaaaaggaaacaataaaatcGGAATATTGTATGAATGATAATGAAAGTAAAACTGGTATTATTAAAGGTGCTGCTGATTATAATATACCAAATAATAGTAGAAAAAGATTAACTAGCTCAAGTAGTAGTCAAccgtatactaaaaaaaagataaaaattagtaaaataaaGagTGATTTAGAACATATTCAGCCAACAAATCATGATCGGTTAGAAATTGTACCAATCCATCAGGAAACAACTATACAAAAAGTTTATATATCatattttgaaaatacaaATGATAATTCAGTATCGAGAGATGAAATTAGttaTTGTCGAGATCAAAATCAATTTCTATCAGAAGCTAAAAGATTGAAACATGCAGCAGATAAAGAAATTGATCATTTAGCTCAGGCAATGCTCTATTTAGAGGCTGTGCTTTATTTCCTTCTTACTGGTGATGCTATGGAAAAAGAATCTGTTACTGAAAAAGCAGCGTTTACAATGTACAAAGATATACTTAGTTTAATCAAATACATTTCATCAAAATTTCGTGGCCAACAACAATCCTTGACTGTACAAGGAAGTATTCATAGTAAAGTTGCTATACTTAGTTTAAGATGTCAGTCAATGATTTAtctaaaattatacaaaatgcGTCGACAAGAAGTTAAAGATATACAAAAAGTTATAtctgaatattttcaaaaaggCGGTAGTGAGATACCAAATGGGAATACACCGTCCCCACTATCGCCAACTAATTCCGTTGGATCTCAAAGTTCCGGCTACAGTTCTGGAGCACAAGCAAACTCAAATGCTCCTAATTGTTCATTGGTGCCTTTTCAGGTTCATTGTGCATTTCAAAGACAAGGaatcatatttaattatttggtTAGTTGTCATGATTTATGGGAGCAAGCTGATTCATTAGTTAACAAAGGGAATCATACtgatttttttatagCATTAGATCATGAAAATGGTCCAATGACATTACATAGTTCATTATGTAATGTAGTAAAATATGTTCATGCCggaattcaaaaattaaaaacccaaactgcaacaacaacaccagCAACAACCATAACTCCACAAATAACTATAGCAACAACAAAGTAA
- Protein Sequence
- MKKPQKPRLEDEREERRQRDKQARARLSQQVQNPDMEPTTPLFAAPVRLSPSESDRRIQSRLGDFALVKHLLDEPKRFIGISTSPIIPRSAPNTTSNLSSLSTSSSSLLSSAALPGSSSLIVPLSGSRSSTHPHHQAPPPRPNFIKPADSKTAYNGRGGSGYPGQSIKHETIHSNIVPSKGQISVPPPPSQPVMMNGRPNINNNNINNINNNNNDNKPSSSSPIIIPNGRLLPPRPFRLPKDVQINTESNNELNTSAIFSGGAVENILKEMGTTFEPITSIAATPRKEMDSKFPFNQQHPQQPPHKYTDFSMFNSTTKQRERSTSRPTELENDLDVSDSDGEQGERRKHNTLIEPLLSPPNDISSESGTESMTSESSSDAEEAITVTKIERTDQISPSSSKLEQWNLSSFVKPSVEVIHPIPDPPPTNLTIKNEPHLINDDELSQAEGTNINVYEQRQNNYDYQNDTKLIKDESIISPTLLSPDKPLSSDTFESDEIESVLAEAKQITAIKPVSSFSDTDDKLDTCLTNKKPVKKRRRNLIEKIPASDSSDDDGFQSANIQSSRRSRSKSGDHEKKTRGRPRKNIVANLPPPQQQQLLPPTSTPINISITKTISNKKETAKKVTAKRRASQQNINPKSRALLDTTSDSTDNESSKKSTILRDKKPVSERLIHPSPRNVPKPTDDNSNSMSSPSSRGHHSSRSRRSISPIVQRILSPTTRRLPTSSSNDHTDDSDSDELDKEDRKLPDKSKSDKNKNDTLRKLFSGFNKEGGAKGKGGQVLVVSEDPQTQVKDDHIPNEKLLSPCTSSLSRHNSNYELQQTTPRSTSNNSTNINNNQLINDTNININLNNSNFNIKNNTIQQVMCRIDLNRLIRIPFPSEIIQNTTTATTSSLSYHDKSPIELIKTRVSNQNQLINSNNINERLIKSPASWTAATITTTNRNRNSNQLIDDDRLINTKENNQNYNEKIIINSRLINNDTINTLNNNKTINQRDDNLNNENGRLNCNNYLYNNSNNNINTVDNRLASIEQQIIATTTSATTVTSTGTTRNNREFSQYNSPKNYDDKQQLLNKNTTTTASTIITTPTSSSNNNSNSNNIKKETIKTEFTNNSDYNNYNNTIISPKTLSSDDKVINYNNNNKLNNNNTIKKETIKSEYCMNDNESKTGIIKGAADYNIPNNSRKRLTSSSSSQPYTKKKIKISKIKSDLEHIQPTNHDRLEIVPIHQETTIQKVYISYFENTNDNSVSRDEISYCRDQNQFLSEAKRLKHAADKEIDHLAQAMLYLEAVLYFLLTGDAMEKESVTEKAAFTMYKDILSLIKYISSKFRGQQQSLTVQGSIHSKVAILSLRCQSMIYLKLYKMRRQEVKDIQKVISEYFQKGGSEIPNGNTPSPLSPTNSVGSQSSGYSSGAQANSNAPNCSLVPFQVHCAFQRQGIIFNYLVSCHDLWEQADSLVNKGNHTDFFIALDHENGPMTLHSSLCNVVKYVHAGIQKLKTQTATTTPATTITPQITIATTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -