Pder015508.1
Basic Information
- Insect
- Pediacus dermestoides
- Gene Symbol
- dsx
- Assembly
- GCA_963942485.1
- Location
- OZ012629.1:10071489-10088379[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-23 3.4e-19 68.9 13.9 2 47 25 70 24 70 0.97 2 2 1.3 6.2e+03 -2.4 0.0 3 14 116 127 115 130 0.67
Sequence Information
- Coding Sequence
- ATGTCAGATTCGCAGGAATACGAGAGCAAAATGAATGTGAATGCATCGAGTACCTCAGCGTCACCAAGAACACCCCCGAATTGTGCACGTTGCAGGAACCATCGAAAGAAAATCGCTTTAAAAGGTCATAAGCGATACTGTATGTATCGCACGTGTAAATGTGAGAAATGCCGGTTGACCACAGACAGACAGCGCGTTATGGCTATGCAGACGGCTTTGCGTCGGGCTCAGGCTCAAGATGAGGCAATGCTTAGAACTGGTACCTCAGATATACCGATTTTGGCATTGTCCCAGAAGAGTCCCTCACCGATTCAGGCCATCGAACGGGGTTATGATTGTGATTCACCGACGTCCTCGCAGTGTTCTAACCCGTCCGCCGTTGTCAGGAAAATCAGTCCAGCTCCTGCTATTCCGACTACTACCAACAACATTAGTACTCTCATCAATTTGTATTCTGACATCTATCCTCAACGAGCAGGTCCAGCAGACGATATTTTGGTGACTGGAGACAGATTTGCGAGAAAATTGGCCTCGTCCCAAGAAGACTTGCTTCTGCTATGGTACATGAAATTGATGTTATTGAAGCTATAA
- Protein Sequence
- MSDSQEYESKMNVNASSTSASPRTPPNCARCRNHRKKIALKGHKRYCMYRTCKCEKCRLTTDRQRVMAMQTALRRAQAQDEAMLRTGTSDIPILALSQKSPSPIQAIERGYDCDSPTSSQCSNPSAVVRKISPAPAIPTTTNNISTLINLYSDIYPQRAGPADDILVTGDRFARKLASSQEDLLLLWYMKLMLLKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -