Basic Information

Gene Symbol
hang
Assembly
GCA_003055125.1
Location
NDXZ01009944.1:2730-15117[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.16 11 7.1 0.9 3 23 406 427 405 427 0.92
2 18 0.35 24 6.0 3.5 3 22 530 549 528 549 0.90
3 18 0.038 2.6 9.0 1.1 1 23 624 647 624 647 0.91
4 18 0.0016 0.11 13.4 0.2 3 23 767 788 766 788 0.96
5 18 2.2e-05 0.0015 19.2 0.3 1 23 796 819 796 819 0.97
6 18 0.0013 0.091 13.6 0.0 2 23 908 929 908 929 0.97
7 18 0.0013 0.089 13.7 2.7 2 23 979 1001 978 1001 0.95
8 18 0.0053 0.36 11.7 0.2 2 23 1010 1032 1009 1032 0.95
9 18 0.0036 0.25 12.3 0.1 1 23 1045 1068 1045 1068 0.95
10 18 0.0016 0.11 13.4 1.1 1 23 1126 1148 1126 1148 0.99
11 18 0.0025 0.17 12.7 0.9 1 23 1156 1179 1156 1179 0.96
12 18 0.13 9 7.3 0.1 2 20 1187 1205 1186 1205 0.95
13 18 4.4e-05 0.003 18.3 0.2 3 23 1271 1291 1270 1291 0.98
14 18 0.00018 0.012 16.4 0.7 1 23 1326 1348 1326 1348 0.97
15 18 0.00051 0.035 14.9 0.7 2 23 1440 1462 1439 1462 0.91
16 18 2 1.4e+02 3.6 0.3 3 20 1483 1500 1482 1502 0.91
17 18 0.14 9.3 7.3 0.9 3 23 1517 1537 1517 1537 0.97
18 18 0.00021 0.014 16.2 1.1 1 23 1791 1813 1791 1813 0.98

Sequence Information

Coding Sequence
ATTTCTAATTATGATAATTTATCTTTGCGCATCTGCCACGCCTGCATAAGTTATCTAAACTCTTGGCAATCGTTTAAGAATCGCTGTCTGGCATCGCAGGTCAAACAACGTTCCTGGCTGGAGGAAACTTCCAGCAAGTCAATACAATCTGCCAGCGATCATCATCATCAATCAGTAGATGGTCATTATGATGATCAACATAAGCAGTTACATCATCAAAGACAGGATGAACAACAATCGTTGGCTTCTTCCATATTGGAGGGAATTTCAACGTTAAAAAAACGCAAATCGTTAACAGTCTATGTGAGTCCTAAATTGCAACcaactaaaaaacaacaagaaaaattattaccaaaacaGCAACTAAATATTGTAATGCCGTTAACAAAACGTCACTATAccaaacataaatacaatacGTCTCAGCGACAAACGCAAAATCAAACAACGCACACTCCGTCGGCGACAACACATCTCGTACAAGCGTCGTCATCGTCGTCCTCACCATCCTctagtaaaactaaaaaaaaatcggaaaataaacaaatgccGGCCACATTGCAGCCATTATTAGCTACATGTTCGACCTCGACCCTTCAACAGCAATCATTTGTTATGCCAGCAGTTTCTAATGTAACTGCTAGCGTAACTACTTGTACGATTACTGCGCCAATTGTGACAAGCACCGCAACAGCAACTACTCTAGATAGAGATAAAACGGCCAGCACAACACTAACTACCGCTTCAGCAACTGTAGTAGCTAAAAGCAGCTGTAGTTATGCTGCGACTGCAACAGTGGCGGCATCTGCCGCCACTGTTGTGGCTGCTGCAGGTTCGCTTGTTAGTGCTGGTTCTAGTGATGAGTGTTTGATTGGGGGATCAATGGCATCTTCCTCGTCGGTCGCTTGTACAAGTGCTGTTCAACAATTGCGTTTGTTTAGACGATACTCCTATAATCCGTTACCTGCAGTACAAATAAAAGACGAACCACTTGAGCTGGACGATGATTATAATGTATcgaaacaacagcagcaacaacatgaTGAGTCCGATGAAATGGTAGTGGATCCCACTATGTTTTTAGAGCGTACCGCCGATGAGGGGGATTATATGgaatcCACTTCCAATTACGATTATGAAGTGGTTAGGCCACCGGCAGACTTGAAATCATTACCAGCTAGTACCACCATACGCATGAGCACTAAAGAGGCTGCCTGCCGAgcttgcaatttaaaattttcaacgcGCGCTAATGCCAGACGTCATGAAAAGAATCTACATCCTAATCTGTTTGAGACTCTAGAGGAAAACGATCAGTCAGTAAATAAACAAACCGCCGCTTTAAATGCCTCCTTAGAATTGCAAAGAGCCGTAGCAGCCGCTGTGGCAGCTGATGCTTGCAAACTATCCAGCGGTGCTATTATAACACCACAAAAATATCGTCAAGAAGTTGTTAATGCTTTCAATAACAGCGAATTCGGTTTTGATTATGATAATCCAGATAAATATCGTGAGCTCTTGACGGATGAGAAAATTGTTTTCCTACAACAAAACGATGAATTTCTAAGGCAATATCAGAATATGACCTGTCGTTGTTGCAACAAATACTATACTACCTATAAAAATTTCATGGCTCATATGCGTAAAAAGTACCTAACACTACCCAGAAATTGCTGTTTCAATTGCCTTAAATTAAACGATTCGAAGGCCCTGTTTATATCGCATTTGAAAAAGCGCAACTGCATAAATTTGCATAAAgtgttacaaaatttaatgtCTAAAAATGCCAATTTTGCGGCAGCTGTTACTGCCACAGTAGCGGCGGCACCCGAAAAAGTTCGAGCCAAAGAATTGCTGGTGAATAAAATGTACGAGTgtaaactttgtacgaaaatTTTTCGTCTAAAATTAGAATTTCGTTCGCATGTCTATGAAGAACATGCTGATGTACAACGCAAAGATATTAGCATTACCCAGTGCTGCTATTGTGCTGTTAATATTGAGGATCCTGCCGATCGCAAACGTCACTACAATAATATGGATTGTATTGTTACTTTGCGCTGTGTGACTTGTGATACGAAACATGAAACGCAACAAAAGTTTATGGAACATGTGCAGGAAAAGCATTTGGCTAATTTTGGCGAGGAGCAGTTAAAAATCTTATTGGCTGCTGACAATTCGTCGAATAAAATTATGGGAGGAGCATCTTCAGCTGACGATTCACGCAGTAGCCAGTTTAATGTTTCGCTCATTAATACCACTCCCAAGACACAATATTTTTCACGTATGCCACAGGCCTGTCCCATATGCGGTCAGCagtacaacaactacaacaatgtGCTGCGACATATGGAATCTAAACATCCAGATCAATTGCCACAAACCTATAAATGTGTTAAGTGTGGACAAGGTTATCCAAGGCTATCGAATTTACGTGAGCACATGGTCACTACACATGGAGCTGATAAAGCACGCCACACCGGATTTGAATATATAGTAAATGCAGATGCTGTTAAAAATGCAGCCGGCTCACCAGCGGCACCACAAAATCCCTACACAGGACGTTATGATTATGTAATGAAGGATTTAATGTCTATAACAAATGGTGGGACAGTTGctgacAATGATTATGAAAGAGAAAATGTTGCAAAGAAAATGCGCTTGGAAGCaaacatttcaattaataataacaatggCACGGTAACTAATGTAAATCCTCGAGAATGCGCCATTTGTAGTGCTGTATTTGCCAACAATATTGGTCTCTCAAATCATATGCGTTCACATCAAAGTGCCCAAAATAATAACTATGGTATTTCATCTTCGAAAGCGACGGCAGCAGGTAGTAATGCTGGTCAGTTCTCTCcaacaggtcaacagcaaataTTACGGAAATCTTTGGAACAAGCAGCCGATAGACGATTTCGACGCATGCGTTGTCGTATTTGCCAACGACGTTTCTCTTCAAAAAAATCGTATCGCTATCATATGCTCAACGATCATCAAATTCGCAatgtacaatttataaaatgcaAATTGTGCGATGCCGAATTTGCATACGAAAAAGGTTTGAAGGTGCACATGTTTAAGATACACAATACTCTGTTAAAGGATGATATGATTATAAAACAATATGAATGCGAAATTTGTTCTATTGTCTATCGTACCGATGTAGAATTGCAACACCATTTGGCCAACGTACACAATACACAAGGAGAACCCTCAAATATGGAAGATGAGGACGCTTACAATGCCGACGAGTCTATGACAGGTGGTGTTGTTGACAATAGTTCAGTGGGTGCTGATAAGTCTGGCATACCGACACCTGTAAGTACTGTTGCTGTAGCAGACGCTCAAGCTGGTCCCCTATACTGGTATCAATGTAAATATTGTGCATCtaactttaatacaaataaaaaattggccaTACACATTAACTCGCATGATGAATTCGATTCAAATGATTATTCTTGCAAAGATTGTGGCAATGTTTATAGTGGACGCAAAAGTTTATGGGTTCATCGCTATAAGAAACATCCCCAGATACCCGAACCCTCGGAATGTGTTATGTGCAAGAAGGTGTTCTTCGATGTCCAAATGTTGACAAATCACATACCATCGTGTAATCGCAAACCCATTACCCAAGCAGCCAGTGAAACGGCTAACGCcgtatacaaacataaaaccgGCGACGATGAGGATGAAGACGACGATGAGCAATCTCGTGAGGCCGAGAGTAGTTTAGCTACGGCCATTAATGCCACAGTGGGCAGTGCCagcaatttgaaaataaaattacccGAAGTTGCTTGCACGATATGTGGTGCCCGTTTCACCGATCAGGACTTGTTCGCCAAACACATACAGAAGCATGAAATGGAGTTGTATACGGACAATCCGTTGGCGGCCATGTTTGATACTGGACCTGCCGATCCAAATCAATTTTACATGGATCGGATGAATGATAATGGCGAGTATGCATGCGATTTGTGTTCAAAGACATTTACACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAACTTACGTCGAGCAACAGCAATATTCAACATTCGCAACAGCAGCTCAACAAAAGCCAACAACAGCTGCAACAGcatcagcaacagcagcagcaacatctTCAACAGCAGCAGAAATCGAAATCAAAGATGCCAATCAACCATCAACATCTGCTGGGATTACAAGCGGTGGGTCTAATGCCGCGCCAATTGGCCCATATGGGCGGCAATCACAGAGCCCAAAAGCGTAAACGTGAGCTTCGCTGTCAATACTGTCCCTCTACCTTCATCAGCAACAATAACTTGCGACGCCATCTCTACGAATTGCACAAGAGTGAAATGGGCCATTTACCTGAACCACCGAGAATCGAATGTGATGCACCAAATATGTGCCGAAGGTGTcatattaaatttgaaacaaaaggcGAATGGATTGAACATAAAGTGTCGGAGGCCAGAGTTATGAGACCATATGGACCATTCCAATGGGGTTGTGATTTGTGCGGTGCGTATGTGTCGCGCAAGGAGaaattaataaatcatttgCACAATCATATGAAAGAACAAGTGATAGTGCCGGTCGAACATCCAGAACCCAAAGAACAACAGAAAACTCAAAATTCGGCAGCTCAAATCCAAAATCAACAAGATCAGCAACAACAGAAAGCCAAGGAAGGTGACGACGTtatgccagaattcaaaaagaTCAAAATACCCTCTTTGCCGGCAAAGCAGGAAGCTGATGAAGAAGAATCCAGGGACAGTGTTAAGGATGAATACGATGAAGATGACGtggatgatgacgatgatgatcgAGAGGAGGGCGAGGAGGGAGAAGGCGACGGTGATGTTGAAGCTGAAGTTGACAATAATAGTAGAGCTGAAGCTGaggaagaaaaacaacaacgacgACCTGGCGTTGAAGACTTCGATGAGGGAGATGAGGAAGAGGAAGCAGTTGAAGGTGAGGAATTTGATGATTTGGCCGTTGGAGCTCAACAGACCGTGGGCGGTGATGAAGACGTCGACGaggatgatgacgatgatgaggAGGATGACGATAACGACGATGATGATGACAGTAGTGATGCCGATGATGAAGATCCCTCGACCAACGAAGATACCAATGAGGCCTCCAGTCTTAAGGATAAACCCACAGAACTAGCACAAACCCGCAGTTACAATGACACCGAAGTCGATGAGAACGACGATGATTCCGACGAATACGATGACGATGAAGATGAAAATTCCTCAACGGACAATCGCAAGTCATCTTCGTCAAATGCGCTTAGCAATGTAACCGCAAAATCTCGTTATTCCTGTGATCTATGTCAGCTGTTTTTCGATACACAACAAGAGTTGCAAAAACATGTGAAAATGCATTTTCTTAATGGTCCCGGTTCGGTGACATTAACGGAAATCAAGTCCTTATCAAAATCCTCATCGAACAAAAGTCGCAGTAGCAGTAGTGATGTTGTAGCCGTATAG
Protein Sequence
ISNYDNLSLRICHACISYLNSWQSFKNRCLASQVKQRSWLEETSSKSIQSASDHHHQSVDGHYDDQHKQLHHQRQDEQQSLASSILEGISTLKKRKSLTVYVSPKLQPTKKQQEKLLPKQQLNIVMPLTKRHYTKHKYNTSQRQTQNQTTHTPSATTHLVQASSSSSSPSSSKTKKKSENKQMPATLQPLLATCSTSTLQQQSFVMPAVSNVTASVTTCTITAPIVTSTATATTLDRDKTASTTLTTASATVVAKSSCSYAATATVAASAATVVAAAGSLVSAGSSDECLIGGSMASSSSVACTSAVQQLRLFRRYSYNPLPAVQIKDEPLELDDDYNVSKQQQQQHDESDEMVVDPTMFLERTADEGDYMESTSNYDYEVVRPPADLKSLPASTTIRMSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENDQSVNKQTAALNASLELQRAVAAAVAADACKLSSGAIITPQKYRQEVVNAFNNSEFGFDYDNPDKYRELLTDEKIVFLQQNDEFLRQYQNMTCRCCNKYYTTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLQNLMSKNANFAAAVTATVAAAPEKVRAKELLVNKMYECKLCTKIFRLKLEFRSHVYEEHADVQRKDISITQCCYCAVNIEDPADRKRHYNNMDCIVTLRCVTCDTKHETQQKFMEHVQEKHLANFGEEQLKILLAADNSSNKIMGGASSADDSRSSQFNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVTTHGADKARHTGFEYIVNADAVKNAAGSPAAPQNPYTGRYDYVMKDLMSITNGGTVADNDYERENVAKKMRLEANISINNNNGTVTNVNPRECAICSAVFANNIGLSNHMRSHQSAQNNNYGISSSKATAAGSNAGQFSPTGQQQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNTQGEPSNMEDEDAYNADESMTGGVVDNSSVGADKSGIPTPVSTVAVADAQAGPLYWYQCKYCASNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDVQMLTNHIPSCNRKPITQAASETANAVYKHKTGDDEDEDDDEQSREAESSLATAINATVGSASNLKIKLPEVACTICGARFTDQDLFAKHIQKHEMELYTDNPLAAMFDTGPADPNQFYMDRMNDNGEYACDLCSKTFTQMTALKVHRKWHFRGDSKQNEADQLTSSNSNIQHSQQQLNKSQQQLQQHQQQQQQHLQQQQKSKSKMPINHQHLLGLQAVGLMPRQLAHMGGNHRAQKRKRELRCQYCPSTFISNNNLRRHLYELHKSEMGHLPEPPRIECDAPNMCRRCHIKFETKGEWIEHKVSEARVMRPYGPFQWGCDLCGAYVSRKEKLINHLHNHMKEQVIVPVEHPEPKEQQKTQNSAAQIQNQQDQQQQKAKEGDDVMPEFKKIKIPSLPAKQEADEEESRDSVKDEYDEDDVDDDDDDREEGEEGEGDGDVEAEVDNNSRAEAEEEKQQRRPGVEDFDEGDEEEEAVEGEEFDDLAVGAQQTVGGDEDVDEDDDDDEEDDDNDDDDDSSDADDEDPSTNEDTNEASSLKDKPTELAQTRSYNDTEVDENDDDSDEYDDDEDENSSTDNRKSSSSNALSNVTAKSRYSCDLCQLFFDTQQELQKHVKMHFLNGPGSVTLTEIKSLSKSSSNKSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-