Basic Information

Insect: Paykullia maculata
Gene Symbol: -
Assembly: GCA_003055125.1
Location: NDXZ01103773.1:11169-14634[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00012 0.0085 16.9 3.3 3 23 109 130 108 130 0.97

2 14 0.002 0.14 13.1 0.2 1 23 137 160 137 160 0.94

3 14 2.4e-05 0.0017 19.1 0.0 1 23 165 187 165 187 0.98

4 14 0.0053 0.36 11.7 2.4 1 23 193 216 193 216 0.92

5 14 4.5e-06 0.00031 21.4 2.0 1 23 222 244 222 244 0.99

6 14 5.2e-05 0.0035 18.1 3.7 3 23 252 272 251 272 0.97

7 14 0.0095 0.65 10.9 1.6 1 23 278 301 278 301 0.97

8 14 0.0011 0.076 13.9 2.0 3 23 417 438 415 438 0.94

9 14 0.0032 0.22 12.4 1.4 1 23 445 468 445 468 0.94

10 14 0.00011 0.0074 17.1 0.1 1 23 473 495 473 495 0.98

11 14 0.0016 0.11 13.4 0.6 1 23 501 524 501 524 0.94

12 14 0.0028 0.19 12.6 3.7 1 23 530 552 530 552 0.99

13 14 5.2e-05 0.0035 18.1 3.7 3 23 560 580 559 580 0.97

14 14 0.0095 0.65 10.9 1.6 1 23 586 609 586 609 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00012	0.0085	16.9	3.3	3	23	109	130	108	130	0.97
2	14	0.002	0.14	13.1	0.2	1	23	137	160	137	160	0.94
3	14	2.4e-05	0.0017	19.1	0.0	1	23	165	187	165	187	0.98
4	14	0.0053	0.36	11.7	2.4	1	23	193	216	193	216	0.92
5	14	4.5e-06	0.00031	21.4	2.0	1	23	222	244	222	244	0.99
6	14	5.2e-05	0.0035	18.1	3.7	3	23	252	272	251	272	0.97
7	14	0.0095	0.65	10.9	1.6	1	23	278	301	278	301	0.97
8	14	0.0011	0.076	13.9	2.0	3	23	417	438	415	438	0.94
9	14	0.0032	0.22	12.4	1.4	1	23	445	468	445	468	0.94
10	14	0.00011	0.0074	17.1	0.1	1	23	473	495	473	495	0.98
11	14	0.0016	0.11	13.4	0.6	1	23	501	524	501	524	0.94
12	14	0.0028	0.19	12.6	3.7	1	23	530	552	530	552	0.99
13	14	5.2e-05	0.0035	18.1	3.7	3	23	560	580	559	580	0.97
14	14	0.0095	0.65	10.9	1.6	1	23	586	609	586	609	0.97

Sequence Information

Coding Sequence: AAACCTCTCACTTTTGACCAATGGGACGATACCACATGCAAGTTCATCGAAACTTTTGCAAATTTCCCATTACTATATGATAAGAAGAATGAGTTGTATGGCAAAGTAGAGGATAAGAAAAGGGCTATAACAGACATACAGAACGCCCTACTGAATCAGCATAAGATTGATTTCAACCAGGAAATGGTATCAAATTCTGTACATCAGTTGAAGTATTGGTATTATCTAACCCAAAGACGAAAAGGCAAACTTAGCAAATGTCATgagcaatatttaaatttatgcaaatttattcCGGGAAAGCgaataaaagaaaagattttatgTAGCATATgtgaaaaggttttttatacAGAGCACAATTTGAAACATCATCTATCGAAAGTTCATAAAGTGGGAGACTTTTCGTTTCAATGTGATCTGTGCGGAAAGGAACTTGTTTCGAAAACAGCTCTAGAATATCACAATTTAAGGGTTCACGCTGAAAAGAAATATCCTTGCGAGTATTGTGGAAAACTATTTGCTATACCCGCAGAACTGAAGGTCCATACACGGGTTCATACGGCCGAGAAGCCACATGTGTGCGAATTATGTGGCAAATGCTTTAGGCTACGAAACCTTTTGGGTCTTCATGTTACACGTATGCACACCAAGATACGTGCCTTCAAGTGCACAATGTGTCCTAaagattttttccaaaataccgATCTAAGAGATCACATGAAATCACATTTAAATATTCGCGATAAAATATGCGAAACTTGCGGTAAAGGTTTTACAAATTGTCATTCCTTGATACGCCATCGTCAGATACACTCAGATATCAAGAAGTTTGCCTGTAAACTTTGTGATGCAAAATTTCATCAGTTTGTTGGACTTAATGGCCACATGAAACGTACCCATAATATTAAACCGCTCAATCTTGAACAATGGGACGACGCAACATGTAAGTTCATCGATATATATGCAAAATTTCCTTTACTTTATAATGGAGAACATCCGGTATATGGCGAATATGAGGAGCAGCAGAAGGCAATAACGGAAATTCAAAATATCCTAAGTTGcgaacacaaaatatattttagcgaGAAAATGCTATCCGAAGCTATAGATCAATTACAATCTTGGTACTATTCAACCAAACGCCAAAAACATAAGACAGACGTTGCTAAACCTGGGAAATATCACGAGgactacttaaaaaaatgcaaatttttgccAGAAAGGCGATTAAAAGTGAAAATTATTTGTAGCATTTGCGACAAGAACTTTTATACAgatcacaattttaaatatcatttgaCAAAAGTTCATCAAATCGGTGACTTTACATTTCAATGTGATCAATGCGGAAAGAAACTTATTTCGAAGTCGGCTCTGCAGTGTCACGCCCAAAGGGTTCATTCGGAAAAGAAATACCCATGCGAATTTTGTGGAAAGTTATTTGCTATACCCTCAGAACTGAGAAACCACACACTGGTACACACGGCCGAGAAGCCACATGTGTGTGAATTGTGTGGAAAAGGATTCAGATTACGAAATAATTTAGGTCTTCATGTTACTCGTATGCACACCAAGATACGTGCCTTCAAATGCACATTGTGTCCCAAAGACTTTCTCAAAAACTGCGATCTTAAGGACCACATGAAATCGCATTTAAATATTCGCGACAAAATCTGCGAAACGTGCGGTAAAGGTTTTACAAATTGCCATTCCTTGATACGCCATCGTCAGATACATtcagaaataaagaaatttgcCTGTAAATTATGCGATGCAAAATTTCATCAATTTGTTGGGCTTAATGGTCACATGAAACGTACCCATAATATAGTAAAAAAAGACGCTAACGCTCGTTAA
Protein Sequence: KPLTFDQWDDTTCKFIETFANFPLLYDKKNELYGKVEDKKRAITDIQNALLNQHKIDFNQEMVSNSVHQLKYWYYLTQRRKGKLSKCHEQYLNLCKFIPGKRIKEKILCSICEKVFYTEHNLKHHLSKVHKVGDFSFQCDLCGKELVSKTALEYHNLRVHAEKKYPCEYCGKLFAIPAELKVHTRVHTAEKPHVCELCGKCFRLRNLLGLHVTRMHTKIRAFKCTMCPKDFFQNTDLRDHMKSHLNIRDKICETCGKGFTNCHSLIRHRQIHSDIKKFACKLCDAKFHQFVGLNGHMKRTHNIKPLNLEQWDDATCKFIDIYAKFPLLYNGEHPVYGEYEEQQKAITEIQNILSCEHKIYFSEKMLSEAIDQLQSWYYSTKRQKHKTDVAKPGKYHEDYLKKCKFLPERRLKVKIICSICDKNFYTDHNFKYHLTKVHQIGDFTFQCDQCGKKLISKSALQCHAQRVHSEKKYPCEFCGKLFAIPSELRNHTLVHTAEKPHVCELCGKGFRLRNNLGLHVTRMHTKIRAFKCTLCPKDFLKNCDLKDHMKSHLNIRDKICETCGKGFTNCHSLIRHRQIHSEIKKFACKLCDAKFHQFVGLNGHMKRTHNIVKKDANAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01201814;
90% Identity: iTF_01201814;
80% Identity: -