Basic Information

Insect: Paykullia maculata
Gene Symbol: -
Assembly: GCA_003055125.1
Location: NDXZ01013754.1:11128-17426[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.5e-06 0.00045 20.9 1.3 1 23 516 538 516 538 0.97

2 18 0.00013 0.0086 16.8 0.5 1 23 544 566 544 566 0.97

3 18 5.6e-05 0.0038 18.0 0.6 1 23 572 594 572 594 0.98

4 18 4.2e-06 0.00029 21.5 3.0 1 23 600 622 600 622 0.97

5 18 5.5e-05 0.0038 18.0 4.7 1 23 628 650 628 650 0.99

6 18 9.7e-05 0.0066 17.2 5.6 1 23 656 678 656 678 0.97

7 18 4.8e-07 3.3e-05 24.5 4.3 1 23 684 706 684 706 0.98

8 18 1.8e-07 1.2e-05 25.8 2.4 1 23 712 734 712 734 0.97

9 18 0.0001 0.0071 17.1 6.7 1 23 740 762 740 762 0.97

10 18 0.00017 0.012 16.4 6.6 1 23 768 790 768 790 0.98

11 18 1.6e-05 0.0011 19.7 4.5 1 23 796 818 796 818 0.98

12 18 6e-05 0.0041 17.8 8.3 1 23 824 846 824 846 0.98

13 18 3e-06 0.0002 22.0 7.7 1 23 852 874 852 874 0.98

14 18 1.1e-06 7.3e-05 23.4 7.7 1 23 880 902 880 902 0.98

15 18 0.00033 0.023 15.5 9.5 1 23 908 931 908 931 0.95

16 18 0.00028 0.019 15.7 0.5 1 23 937 959 937 959 0.97

17 18 0.00041 0.028 15.2 4.5 1 23 969 991 969 991 0.98

18 18 1.5e-05 0.001 19.8 1.6 1 23 997 1020 997 1020 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.5e-06	0.00045	20.9	1.3	1	23	516	538	516	538	0.97
2	18	0.00013	0.0086	16.8	0.5	1	23	544	566	544	566	0.97
3	18	5.6e-05	0.0038	18.0	0.6	1	23	572	594	572	594	0.98
4	18	4.2e-06	0.00029	21.5	3.0	1	23	600	622	600	622	0.97
5	18	5.5e-05	0.0038	18.0	4.7	1	23	628	650	628	650	0.99
6	18	9.7e-05	0.0066	17.2	5.6	1	23	656	678	656	678	0.97
7	18	4.8e-07	3.3e-05	24.5	4.3	1	23	684	706	684	706	0.98
8	18	1.8e-07	1.2e-05	25.8	2.4	1	23	712	734	712	734	0.97
9	18	0.0001	0.0071	17.1	6.7	1	23	740	762	740	762	0.97
10	18	0.00017	0.012	16.4	6.6	1	23	768	790	768	790	0.98
11	18	1.6e-05	0.0011	19.7	4.5	1	23	796	818	796	818	0.98
12	18	6e-05	0.0041	17.8	8.3	1	23	824	846	824	846	0.98
13	18	3e-06	0.0002	22.0	7.7	1	23	852	874	852	874	0.98
14	18	1.1e-06	7.3e-05	23.4	7.7	1	23	880	902	880	902	0.98
15	18	0.00033	0.023	15.5	9.5	1	23	908	931	908	931	0.95
16	18	0.00028	0.019	15.7	0.5	1	23	937	959	937	959	0.97
17	18	0.00041	0.028	15.2	4.5	1	23	969	991	969	991	0.98
18	18	1.5e-05	0.001	19.8	1.6	1	23	997	1020	997	1020	0.96

Sequence Information

Coding Sequence: ATGTCTACGCCGAATGTTAATAGTAACTTAAATGATGGCGTTAAGGGTGGTATTAATCATATATCACCTGCATCGACACCCCTTAGAACTACAGCAACGCCACCATCCACAATTGTTGTGGAACAAAAACATGTTATAACACAACACCAACCAACTATAACAACCACAAATCCAACAACGACGGCAACACCATCATCATCAACTGCAAATGTGGCTTCTAGTCCAGTTGCTGTACCAATGAGCACAACTTTAGTTTCGCCTCAAGATCCACATTTACTGAATGATCATCATCGTCAGCATCAGCATCACGTACATCATCATGCAAATCAAGCTTTGCCCGTACCTATGCTACTTAGTAGTTCGGGTCCTTCAACGACGACAATGCCTGCAACAGGAACCCATTTAGCCAATAATCCACAAAATtTGGGTAAATATTGGGTTGTGACAAACCTATTCCAAGGAGCACCTAGTCAAGCAGCTCAATATAACGAGGGAAGTGTAACGCATACACATACATCCATAGCGGGAGTGCCTTCATCAACATTAGTGCGTGCTATATCCACAACTGCGGGCAGCCAAACAGTGGTTCCCAAAACTGAGGCAGTTGATAGCAGTGCAGGAACACTGCAAATATCACAAAACCAAATGCTATCTCAGGCGGGTATAGGACAATTGCCAAATGGCACCATTATAACAACACAGccacagcagcagcagcagcaacaacaacaacagcaaagacATGTAACAGaacatcaacaacagcaacaaatgcACGTTCATGctttaaataatgCCGAAGATAATcgccagcaacaacaacaacaacaaatagccCAACAGCAACATGTGGCTGTTCTCCAATCCGGCGATGCCATTAAAGATGAAAAACCTTTCAACTCAAATGGCAAAATTAATACAACTAATCAACAGATTATTATGCAGCACATATCAACTGCAGCAACATCTGGCAGTCCGGCTACCTCGGGTGCAACTACCATAACACTGGGTACACCGAAGACAGAAATTAAAGACGATGGTAGCGTAGTAATGAGCGGAAAATCACATCCTGGCTTTGAAATGTATAAAGTAAATATCGAAGATATATCTCAACTGTTTACCTATCACGAGGTATTTGGTAAATTACACGGTGATGTCATGAATCATCCCTTGGCAGCAGCCCATGCAGCTTTACCAACAGCTGCAAACAGTAATATTGCTGCTGCAGTTTCAGCTACCACCACAAGTGCTGCCGAGGGAAATAATAACGTTGGAGTTACTGTGGTGACCAATAGCGTTCCCATAAGCGAAACTACCAGTACTAGTACAGTTGGTACTGTTGGAGTTGTGGCTACAACCAGTGCAGCGGCTAATTTAACAACAGCCGTAGctgaaaattcaaatacaatagCAACTGCAACGGCAACAACTACTGGTGTTGCGGCTACAGGATTGCTAATGCCGAAAATGGAAGGAGGTATTACAAATGTAGATCAAAATACCGTTACTTTGGGGCCCGACGGCACAGTGTTGTCAACTGGCGAACACGTTTGCGATATATGTGGAAAAATGTTTGCCTTCCGCTATCAGCTAATCGTCCATCGTCGTTATCACACCGAACGTAAACCTTTCAATTGTCAGGTCTGCGGCCAGGGTTTTTTTACTTCTCAGGATCTTACGCGACACGGCAAGATACACATTGGTGGACCAATGTTTACCTGTTTAGTGTGTTTCAATGTTTTTGCCAACAATGCCTCTTTGGAACGACACATGAAACGACATTCGACGGACAAGCCATTTGCTTGTACCATATGTCAGAAAACCTTTGCCCGCAAAGAACATTTGGAAAATCATTTTCGTTCGCATACTGGTGAGACTCCATTCCGGTGTCAATATTGTGCTAAAACGTTTACACGCAAAGAGCACATGGTGAATCATGTACGTAAACATACCGGTGAGACACCCCATCGTTGCGAGATCTGTAAAAAATCGTTTACGCGCAAGGAACACTATGTTAATCATTATATGTGGCACACTGGTCAAACACCACATCAATGTGAAGTATGTGGTAAAAAGTATACACGTAAAGAACATCTGGCAAATCATATGCGTTCCCATACAAATGATACGCCATTCCGTTGCGAAATTTGTGGCAAGAGTTTTAGTCGTAAAGAGCATTTTACTAATCACATATTATGGCATACAGGTGAAACTCCCCATCGTTGTGATTTCTGTTCGAAAACGTTTACACGCAAGGAACACTTATTGAATCATGTTCGTCAACATACAGGCGAATCACCCCATCGCTGTACATATTGCATGAAAACGTTTACGCGCAAAGAACATTTGGTCAATCACATACGCCAACATACTGGTGAAACACCCTTTAAGTGCACTTACTGCACCAAAGCCTTTACGCGAAAGGACCATATGGTCAATCATGTGCGTCAACATACTGGCGAATCGCCACACAAGTGTACATTCTGTACAAAAACTTTTACGCGCAAAGAGCACTTAACGAATCATGTGCGCCAGCATACCGGCGATTCACCACATCGTTGCAGCTATTGCAAAAAGACCTTTACACGTAAAGAGCATCTTACGAATCACATACGTTTGCATACCGGCGATTCGCCCCACAAGTGTGAATATTGTCAGAAAACCTTTACACGCAAGGAACATCTTAACAATCATATGCGTCAACATTCTAGTGATAATCCACATTGTTGCAACGTCTGCAACAAGCCGTTTACGCGTAAAGAACATTTGATAAATCACATGTCACGCTGTCACACCGGTGACAGGCCATTTGCATGTGAGACATGTGGAAAATCTTTTCCGCTCAAGGGTAATTTACTTTTCCATCAACGTAGTCATACTAAGGGTCAGGAAATGGAAAGACCATTTTCGTGTGAAAAATGcccaaaaacatttatatgcaAAGGTCATTTGGTATCCCATATGCGCTCTCACTCTGGCGAAAAACCGCATGCTTGTACATTATGTAGTAAAGCATTTGTGGAGAGAGGAAATTTAAAGCGTCACATGAAAATGAATCATCCAAATGCTCCAATGCCACCACCCCCAGTGCCACATCCAGTTATACCAGCAGGAGTTTTACCTCAAATCAAGCAGGAAATTAAACCAGTTATCAGTGAATTagATCCTCTGCAAATTACGGCTCCTACAATGCATACCATACAACAAATAACAGCAGGAGCCGCAGCAAATTCAGTGCAACTAACAGCGGGTTTGACACCTTTAGAAGCTATGGCCCGTGCCACAATGCAACAATTGCAACATATGCCCGCTAATGTTGAACAACATCCTGTCGTTTACTAA
Protein Sequence: MSTPNVNSNLNDGVKGGINHISPASTPLRTTATPPSTIVVEQKHVITQHQPTITTTNPTTTATPSSSTANVASSPVAVPMSTTLVSPQDPHLLNDHHRQHQHHVHHHANQALPVPMLLSSSGPSTTTMPATGTHLANNPQNLGKYWVVTNLFQGAPSQAAQYNEGSVTHTHTSIAGVPSSTLVRAISTTAGSQTVVPKTEAVDSSAGTLQISQNQMLSQAGIGQLPNGTIITTQPQQQQQQQQQQQRHVTEHQQQQQMHVHALNNAEDNRQQQQQQQIAQQQHVAVLQSGDAIKDEKPFNSNGKINTTNQQIIMQHISTAATSGSPATSGATTITLGTPKTEIKDDGSVVMSGKSHPGFEMYKVNIEDISQLFTYHEVFGKLHGDVMNHPLAAAHAALPTAANSNIAAAVSATTTSAAEGNNNVGVTVVTNSVPISETTSTSTVGTVGVVATTSAAANLTTAVAENSNTIATATATTTGVAATGLLMPKMEGGITNVDQNTVTLGPDGTVLSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEIKPVISELDPLQITAPTMHTIQQITAGAAANSVQLTAGLTPLEAMARATMQQLQHMPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: -
80% Identity: -