Basic Information

Insect: Pasiphila rectangulata
Gene Symbol: -
Assembly: GCA_963082625.1
Location: OY720238.1:7904826-7911671[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.1 1.2e+02 4.6 0.5 1 23 54 77 54 77 0.95

2 21 0.3 32 6.4 2.6 1 23 84 107 84 107 0.97

3 21 5.1 5.4e+02 2.5 3.9 1 23 183 205 183 205 0.97

4 21 0.002 0.21 13.3 1.0 2 23 211 232 210 232 0.97

5 21 2.5 2.6e+02 3.5 1.5 1 23 238 260 238 261 0.94

6 21 0.33 35 6.2 2.9 2 22 494 514 493 514 0.95

7 21 5.6 6e+02 2.4 0.4 1 20 610 629 610 632 0.70

8 21 0.63 67 5.4 0.4 2 23 765 786 764 786 0.96

9 21 0.0092 0.98 11.1 0.7 2 23 861 882 860 882 0.96

10 21 0.035 3.7 9.3 0.5 1 23 890 912 890 912 0.97

11 21 0.27 28 6.5 5.4 1 23 950 972 950 972 0.95

12 21 0.00027 0.029 15.9 4.0 1 23 981 1003 981 1003 0.99

13 21 2.5 2.7e+02 3.5 2.6 1 23 1081 1103 1081 1103 0.97

14 21 0.062 6.6 8.5 0.6 1 23 1157 1179 1157 1179 0.95

15 21 0.1 11 7.8 0.2 2 23 1186 1207 1185 1207 0.97

16 21 0.018 1.9 10.2 2.0 1 23 1275 1297 1275 1297 0.94

17 21 0.018 1.9 10.2 0.9 1 23 1303 1325 1303 1325 0.95

18 21 0.0077 0.81 11.4 2.6 1 23 1415 1437 1415 1437 0.97

19 21 0.00019 0.02 16.4 1.4 1 23 1443 1465 1443 1465 0.99

20 21 0.9 95 4.9 2.0 1 23 1554 1576 1554 1576 0.96

21 21 0.0032 0.34 12.6 3.7 1 23 1587 1609 1587 1609 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.1	1.2e+02	4.6	0.5	1	23	54	77	54	77	0.95
2	21	0.3	32	6.4	2.6	1	23	84	107	84	107	0.97
3	21	5.1	5.4e+02	2.5	3.9	1	23	183	205	183	205	0.97
4	21	0.002	0.21	13.3	1.0	2	23	211	232	210	232	0.97
5	21	2.5	2.6e+02	3.5	1.5	1	23	238	260	238	261	0.94
6	21	0.33	35	6.2	2.9	2	22	494	514	493	514	0.95
7	21	5.6	6e+02	2.4	0.4	1	20	610	629	610	632	0.70
8	21	0.63	67	5.4	0.4	2	23	765	786	764	786	0.96
9	21	0.0092	0.98	11.1	0.7	2	23	861	882	860	882	0.96
10	21	0.035	3.7	9.3	0.5	1	23	890	912	890	912	0.97
11	21	0.27	28	6.5	5.4	1	23	950	972	950	972	0.95
12	21	0.00027	0.029	15.9	4.0	1	23	981	1003	981	1003	0.99
13	21	2.5	2.7e+02	3.5	2.6	1	23	1081	1103	1081	1103	0.97
14	21	0.062	6.6	8.5	0.6	1	23	1157	1179	1157	1179	0.95
15	21	0.1	11	7.8	0.2	2	23	1186	1207	1185	1207	0.97
16	21	0.018	1.9	10.2	2.0	1	23	1275	1297	1275	1297	0.94
17	21	0.018	1.9	10.2	0.9	1	23	1303	1325	1303	1325	0.95
18	21	0.0077	0.81	11.4	2.6	1	23	1415	1437	1415	1437	0.97
19	21	0.00019	0.02	16.4	1.4	1	23	1443	1465	1443	1465	0.99
20	21	0.9	95	4.9	2.0	1	23	1554	1576	1554	1576	0.96
21	21	0.0032	0.34	12.6	3.7	1	23	1587	1609	1587	1609	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGTTGAGCGCGCAAGTTGGCGAGGTTTCTACTGTCGCGCGCCCGTTCGAAGGTCGCTTCTCAGTGGACGTCTCTTCTGAGGCGTCCTCGGACGCGGCGGAAGAAACCGAACTTCCGCAGTGCAAGATACGAAGGAACTATAACTGTGCAAAGTGCAAGTATAATACGCAGAATCCGCGCGCTTATCTCGTACACACGCGAGACGTTCACTTTGGAAGATTTAAAATTTACGAGTGTCAATATTGCATCTATGCCTCGAGACATCAACAGAAACTTTTGAGACATACGAAGATGGTGCATGGGACGACGTCAATGCCGACGACTTCTACCATCAAAGTTGAGCCGGAGACCACTGTCAATGAGAGTGTGGTGGAAAATATGGAAGATCTACTAGAAGAGATAGAAGAATGCGACGACTCTCCGATGGACATGGACGTGGACGAGGTCGAGCGCGTCGACTACGCCGAACTCACCCCTTCCAGAAATGGCAACGCCGTCGACTTACCAAAAGGAAAAGGAAAGTTTTTCTCGTGCGACAAATGCAACTACGTCACCCATATAAAGGCCAGATACACGAAACACGTCAAGTACCACTCTATGCCGATGATAAAGTGCACAATGTGCGATTTCCGGACGCCTTACAAGTGGAATCTGGATCGTCACATGAAGAACCACGGTGGGAGCGGTAGCTTCGTGTGTTCGAAGTGCACCTTCACGGCGGACATCAAGCAGAGCCTGACGGTGCACGAGATGAATCACCACACGCCGCCCGTGGGCCAATCGACGGCGAGCCGGCGCCGCAACCGGGTTGGCGCCAGCGACCTCATGTCCGCGGAGTCGGCGATCGCGCTGCTCAAGGAGGAGGAAGGGAGCGGCGACTCGCGCTCCTCGCAAGTCTCGGACATAATGGGCTTGCAAGACGCAGAAAGGGACATTGTGAGCTGTAATAGCGATTCTAACGATACTGCCCCTTCACAAGTCAGAGATGGGAATAACTTTAATCAAGACACACCCGGCCAAAGTTCCCCCAACTCGGGAAACGAAGACAAATCCAATAAGCTGAACAAAAAAGCACCAAGGCCGATCCCACAGCTGATCCCCCTGAACGCATCAACCCCCAACCAAAAGGCATCAGGTGAACCACCAGCAAAGAAATTCAAAGAATCTACCCCAAGCTTAGAAATAAGGAACAAATTCGGAAATCTACCCGGAGACATCACTGTGACACCCATAAACAACATACCAAAAGAAACAGTAGTCCGAAAGAAAAATGAGTCATTTTTCGATAAATTGAAAGAAAGGTTACTAACGGAAACAGGCGAAGAAGGATCGTTAAAATGCAAAAACTGCGGTTTCGAGAGCAAATGCCTTTCAGAACATTCCGTGCACGAAAAGAACTGCGCAGCGCAAGCCAGCCGCGTCATGATGAATACTGCACATACCAGCATGGGTTCCACTCGGTGCCAAAACTGCAGGCACCGGTGTAAATCTAGCGCGGATCTATACGTACACATACAAACTTGCGGCAAGAAAGAAAGTACCCAGAACGCATCGGAAACTAAACCAGACAACGCCGAAGCTTCCACTTCTAGTGGCGATAAAGACGCCGAACCACACCCAATGGAAAATGTTGTCTTTGTGTGGAATAACATAAACCAAAGCAATAAATTCGAAAGACCACTCGATATAAACATCAACGATGACTCGACCATGCCGGAGTCACAGAGACATTACGATAACGAAATCGTCGATGAGAACGAAGGCATGAACTTATCTCCCAACAGTTTGAGTCTCGGGAAGAATGTTTACAAATGCCCCGATTGTAAGTTCTGGGCTGCTACCGCGTCTAGATTCCACGTTCACATCGTAGGGCATTTAAACAAAAAGCCATTCGAATGTTCGCTTTGCAAGTACAAGTCTAATTGGCGCTGGGATATCACCAAACATATTAAACTAAAGTCTGCTAGAGATCCGGAGCACAATGAAGCAAAAGTGCTGATGACTGACGAAACTGGCAGACGAAACTACAGCAAATATAACAAGTTCTTAGCTGTCCCAGTTGCAAATGAAAACGGAGAAAATGATTTTCACTACATCGATCAAAATACATCTCAGGATGCGTCAATGGAGATAGATGAATCACTGAACGATAGCGGAGATATGATGAACACCTCGTACGATATGCATCCGTTGAACTTGCAAACTCAATTTGCTGATCCATACAACTCAATGGACAACCTACAAGAAAAGAAACCGAAAAGGACTATGTGGAAATGTAAAAAGTGCAATTACAAGGACCCTTCAAAGGAGGCCTTGCTGGACCACGTGAGGCAACACTCCAGAGAGGCCAATGCGGAGGACCCTCAAGCGAAAAAGGCAGATGTCCCCGACCCAGCTGATTTGGCGTACCGCTGTGGTCACTGCAACCAGTTGTCCAATTGGAAACACGTAATACAGAGACATTGCCGTTTGAAGCACGACGGAATAATAAAAGTGATCACAACAGTGAAGCCCAAACCTGATCCTGTCTCAACAGTGACTGCAGAAACATTCAACGATTACTGCAGCAAGTGTCCTTACAAGACTAACGACAAGAAACAACTCGCGGAACATCTGCAACAGCATCAGCCGTCATCGCAATCAATCTTCAAATGCTATTTCTGCCCTTACTTCGTCAAAGACGAACAAGATCTGATCCAACACCTTCTACTGCACGGCATAACTGATCCTGAAGATTACATCGCAAAAGCGATGGGCTGTAAGTCTCCTTTGCCCGAGCATACTGTGCACCACGACACTCCCACCGCTAGTGGCACCAACAAGCGCCATAAGTGTCACGAATGCCCTTATGAAACCAATAGCAAATCTCAATACATGTATCACGAGCAGTTCCATCGTTCTACCTCCGCTGAAACCCCATACAAATGCCCCGAATGCAACTACAGCGTGTCGAAGAGGCATCTACTTCACCAACACTTGAGAGTTCACGGAATCTTCTCGAAGAAAAACGAAAGCGAAGCGGAACTAGAAGCATCTACATCGTTTTCGAAAGGTGACAGCTTCAGTGACGAAATTCCTTTTGTATGGGTATCAGCGAGGAACGAATTCCACAAAATGTACAAATGTCGCTATTGTTCATACGTCAACTCTCAGAAATGCAAGATACCTAACCACGAGAAGATACACTGTCTCGGATTCGAAAATAGCGAAGTGATAATATACAAATGTTTAGAATGTAAATTTACATGTGATAATGCCTTGAGACTGGCAGAACATTCCAAGAAACACGGCCTTTTATACGGTCGCATTTACAGCATCGTCGATGAAGATGTACCTGATGAAGACCAAATTTCACGATTACGACGTGTTATTGAACTCGAAAAGGGCGAAGATTCCACCCTAGAGGATAATAACATAGTAACAGATGCTAAAGAAACTAAAATCTTGTACTTTTGTCAAAAATGTCCAGCTCGATATTTTACTGAAGGCGAATTAAAAGCACATGGTAAATTCCATGACCTCTcacatacaaataaatgtaaGCACTGTGAATTCTCAGTCCCTGAGGAGGCTGAACTTATCGTCCACCAGTCTGTTCACTCCGATGAGCACAACATTAGAACAAACATGCTTAAATTCATTCACAATTCACATTCCCTATACAAGGAACCTCGATTAGACGGTAATCGTAGTTCTGAATGCTCTGAAGTTACTTGGTCAGTTGCAGTCAATTACAGAAGCAATGAAAATATGGACCCTCATCCTAAGAAAACTTCAGACACAAAACACACACCAAAGCAATACTGTTGCAAAGAATGCCCAGCCAAGTTCTTCAAAAGTTCAGCACTCACATACCATTTAGGATTACATGGTGGTGAGGGAGAACATAAGTGCAAGAAATGCAGTTATGCTGTAAAGAATATTGGCAATTTAGCTAAGCACGAAATTTTACATGACAATAATATGAAATCACCAAACCATGAATACGAATCAGGAGACGATTtagatttcaaaaatattcctCTCTCAGGTACAGACCTATTTCAAAGAAAGACTGAAGCTCAGAAACGAGTATTGACTGATAAAGACAAATTGGTAAAACCGAATGATCACTTTCCGCCTGTACTCCAAGCAGATCCCCAATTCGGGTATCTGATGCATGGAAATCCTGAATTCATATATCCCACGTACCTGAAAAATGGACGTCAAAAGGAAAAACGATACAAATGCCATAAGTGCCCGTCAGCTTTTGAAAAGCGcgaacaatacaaaatacatttatctctTCACGGCTCCAAGCAACGATATAAATGTGAGTTATGTGACTATTCTGTTAAATACTATGCCAATTACGTCCAACATATGCGGAAGCATCAAATGAATGACGAAGCTCAGGCCGAAAGGCAAAAAGGAAGCAATGGTGACCCCGAAAGTCAAGAAGAAGTAAAACAAGAGGAAGGCACGGAAATTAAATTAGCAATCAAAACTATGCCCAAAGGGACACCGAAATCAGACTTTCAACAGTTCTCAATAAGAGATCAACAAACTCTTCGGCTTTTGCAGCTTAGGAGAACAATGAATAATGGCGGCAAAGATTCAGGTGCAGTGGAGACTGCACCTGTAAAGGAACGTAAAATGCATATGTGTCTTCTTTGCCCTTATACGAACCAGCGGCAAGATGCCCTAAGCAATCACTACAGAAGACATGATGAGACCGATATCCTCAATAGTGGCAGTCACAAATGCTCCTACTGTGACCTAGTAGTTGTGCAATCACATTTCTTACGAGAGCATTTAAAAACACACTTTAATTTCAACAAAGTCCTAACACCTGAATGTTTCGTAGCTAATGACGATGTCAGCTTTTCGATATCAAAGCTGGATGAGGAAAGTGACAAACCAGTTGATCTCAAATtggaaatgaaaaatttaattttaccgtgtaatgatgaaaaaatattcGTTAAGATAAAGACAGGGGAACTGGTGGTTGAATAA
Protein Sequence: MLQQMSSSLSAQVGEVSTVARPFEGRFSVDVSSEASSDAAEETELPQCKIRRNYNCAKCKYNTQNPRAYLVHTRDVHFGRFKIYECQYCIYASRHQQKLLRHTKMVHGTTSMPTTSTIKVEPETTVNESVVENMEDLLEEIEECDDSPMDMDVDEVERVDYAELTPSRNGNAVDLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSTASRRRNRVGASDLMSAESAIALLKEEEGSGDSRSSQVSDIMGLQDAERDIVSCNSDSNDTAPSQVRDGNNFNQDTPGQSSPNSGNEDKSNKLNKKAPRPIPQLIPLNASTPNQKASGEPPAKKFKESTPSLEIRNKFGNLPGDITVTPINNIPKETVVRKKNESFFDKLKERLLTETGEEGSLKCKNCGFESKCLSEHSVHEKNCAAQASRVMMNTAHTSMGSTRCQNCRHRCKSSADLYVHIQTCGKKESTQNASETKPDNAEASTSSGDKDAEPHPMENVVFVWNNINQSNKFERPLDININDDSTMPESQRHYDNEIVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVANENGENDFHYIDQNTSQDASMEIDESLNDSGDMMNTSYDMHPLNLQTQFADPYNSMDNLQEKKPKRTMWKCKKCNYKDPSKEALLDHVRQHSREANAEDPQAKKADVPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKPDPVSTVTAETFNDYCSKCPYKTNDKKQLAEHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCKSPLPEHTVHHDTPTASGTNKRHKCHECPYETNSKSQYMYHEQFHRSTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFSKKNESEAELEASTSFSKGDSFSDEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTCDNALRLAEHSKKHGLLYGRIYSIVDEDVPDEDQISRLRRVIELEKGEDSTLEDNNIVTDAKETKILYFCQKCPARYFTEGELKAHGKFHDLSHTNKCKHCEFSVPEEAELIVHQSVHSDEHNIRTNMLKFIHNSHSLYKEPRLDGNRSSECSEVTWSVAVNYRSNENMDPHPKKTSDTKHTPKQYCCKECPAKFFKSSALTYHLGLHGGEGEHKCKKCSYAVKNIGNLAKHEILHDNNMKSPNHEYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERQKGSNGDPESQEEVKQEEGTEIKLAIKTMPKGTPKSDFQQFSIRDQQTLRLLQLRRTMNNGGKDSGAVETAPVKERKMHMCLLCPYTNQRQDALSNHYRRHDETDILNSGSHKCSYCDLVVVQSHFLREHLKTHFNFNKVLTPECFVANDDVSFSISKLDEESDKPVDLKLEMKNLILPCNDEKIFVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: -
80% Identity: -