Basic Information

Insect: Pasiphila rectangulata
Gene Symbol: -
Assembly: GCA_963082625.1
Location: OY720248.1:1078975-1085027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00028 0.03 15.9 2.3 2 23 114 135 114 135 0.97

2 23 0.059 6.3 8.6 1.5 1 23 141 164 141 164 0.94

3 23 3.3e-05 0.0035 18.8 0.8 1 23 170 192 170 192 0.97

4 23 9.3e-06 0.00098 20.6 2.6 1 23 198 220 198 220 0.98

5 23 1.2e-06 0.00012 23.4 6.0 1 23 226 248 226 248 0.98

6 23 4.3e-06 0.00045 21.6 1.4 1 23 254 276 254 276 0.99

7 23 1.9e-05 0.002 19.6 0.1 2 23 283 304 282 304 0.97

8 23 9.2e-05 0.0098 17.4 7.0 1 23 463 485 463 485 0.99

9 23 5.6e-05 0.0059 18.1 2.6 1 23 491 513 491 513 0.96

10 23 1.3e-05 0.0014 20.1 0.7 2 23 519 541 519 541 0.94

11 23 1.6e-05 0.0017 19.8 0.2 2 23 548 569 547 569 0.97

12 23 1.4e-07 1.5e-05 26.3 0.9 1 23 575 597 575 597 0.98

13 23 0.00027 0.029 16.0 1.7 1 23 603 625 603 625 0.97

14 23 5e-05 0.0053 18.3 3.9 1 23 631 653 631 653 0.97

15 23 0.00013 0.013 17.0 0.2 1 23 659 681 659 681 0.99

16 23 1.2e-05 0.0013 20.2 3.8 1 23 687 709 687 709 0.97

17 23 1.8e-07 1.9e-05 26.0 1.1 1 23 715 737 715 737 0.99

18 23 6.4e-07 6.8e-05 24.2 1.2 1 23 743 765 743 765 0.98

19 23 4.4e-06 0.00046 21.6 0.6 1 23 771 793 771 793 0.99

20 23 3.3e-06 0.00035 22.0 0.5 1 23 799 821 799 821 0.98

21 23 4.3e-06 0.00045 21.6 3.0 1 23 827 849 827 849 0.98

22 23 6.3e-08 6.7e-06 27.4 0.9 1 23 855 878 855 878 0.98

23 23 1.2e-06 0.00013 23.4 0.2 1 23 884 906 884 906 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00028	0.03	15.9	2.3	2	23	114	135	114	135	0.97
2	23	0.059	6.3	8.6	1.5	1	23	141	164	141	164	0.94
3	23	3.3e-05	0.0035	18.8	0.8	1	23	170	192	170	192	0.97
4	23	9.3e-06	0.00098	20.6	2.6	1	23	198	220	198	220	0.98
5	23	1.2e-06	0.00012	23.4	6.0	1	23	226	248	226	248	0.98
6	23	4.3e-06	0.00045	21.6	1.4	1	23	254	276	254	276	0.99
7	23	1.9e-05	0.002	19.6	0.1	2	23	283	304	282	304	0.97
8	23	9.2e-05	0.0098	17.4	7.0	1	23	463	485	463	485	0.99
9	23	5.6e-05	0.0059	18.1	2.6	1	23	491	513	491	513	0.96
10	23	1.3e-05	0.0014	20.1	0.7	2	23	519	541	519	541	0.94
11	23	1.6e-05	0.0017	19.8	0.2	2	23	548	569	547	569	0.97
12	23	1.4e-07	1.5e-05	26.3	0.9	1	23	575	597	575	597	0.98
13	23	0.00027	0.029	16.0	1.7	1	23	603	625	603	625	0.97
14	23	5e-05	0.0053	18.3	3.9	1	23	631	653	631	653	0.97
15	23	0.00013	0.013	17.0	0.2	1	23	659	681	659	681	0.99
16	23	1.2e-05	0.0013	20.2	3.8	1	23	687	709	687	709	0.97
17	23	1.8e-07	1.9e-05	26.0	1.1	1	23	715	737	715	737	0.99
18	23	6.4e-07	6.8e-05	24.2	1.2	1	23	743	765	743	765	0.98
19	23	4.4e-06	0.00046	21.6	0.6	1	23	771	793	771	793	0.99
20	23	3.3e-06	0.00035	22.0	0.5	1	23	799	821	799	821	0.98
21	23	4.3e-06	0.00045	21.6	3.0	1	23	827	849	827	849	0.98
22	23	6.3e-08	6.7e-06	27.4	0.9	1	23	855	878	855	878	0.98
23	23	1.2e-06	0.00013	23.4	0.2	1	23	884	906	884	906	0.98

Sequence Information

Coding Sequence: ATGTGTCAGAAATCAGACAAAATCTGCAGAGATCTTTACCGAAACAACCCTCAGGTGACTGAGAAGACGCTTGCTGAGCATAATCTGGGATGGTTACACAACTTGACTATGTCACCTGTAAAAACCCTGTCCACTTATGAAGATGCAACCAATGATATTGAAATATTCTTCAAAGAAGAAAGAtcttcagatgatgatgatgatgatgcattcaTACATGAAGGCTTTGAAACATTTGTAGATGTTGTCAAAACAGAAGACAGTTCTCAACTTGATGCTAAACACAACTCAAAGGAAGAAAAATTTAGCCCTAATAATGATAACCATAAGTTAACCAATTCCtgtgaaaaatgcaataaaaccTTTGAAACTAAAATAAGGCTAGAGAGACACAAACTAACACACAACAAATTAAAGTCATATAACTGTGAATTCTGTATCAAGACATTTCCAAAAAAGAAGCTGCTTAAAATACACTCAATAAAAAATCATACTGGAGAAAAGCCATATGCCTGTGAAAACTGTGACAAAAGGTTCAACCGTAAGAGACTCCTGGTTGAACACAGCAGGATCCACAGTGGCGAAAAGCCATATAGTTGTGAAGTTTGCAATAAGTCATTTGCGCAAAGTTCAACTCTCAGGTGTCACATGAGAGTGcacactggagaaaagccaCATACATGCGACATTTGCAATGAGTCATTCACTCGGAAACATTCATTGAACAAACACCTCCGCACCCACACCGGGGAAAAACCTTACACTTGCAACACATGCAACAAAAGTTTTTCAGCAAAGAGTGTACTCACAGTACACATGCAGAGACACACTGGAGAGAGACCAATCACATGCAAAGTGTGCGACAAAACATTTGCTGTGAAAGATGGCTGGGTGGCACACATGAGGATCCACACTGGAGACAAACCTTTCATCTGCAGCACATGTGAGCACAGCAGACCTACCGCAGTATGCTACATGTGTTATGCCCAGTTGCGCAGATGTATAAGGTTCTACGAGATGTGCCAGAAATCAGAGAAAATCTGCAGAGATCTGTTTCAGAATAATCTAGAGTTGACACAGGAGTTTCTTGCGAAACATAATTTGGGATGGATATACAACTTGTCGACGACTCCTGTGAATTTAGAGTCATATGATAATAGTGAATCAGAAATTAGTATCAAAGAAGAAGACACCTCAGATGACGAAGTGTTAATGCCCATGTTTGTTGAAGAAATCAAAACTGAATGCATAAAGCCTCATGATGTAACTATTGTTGGAATAGATTTTACAGCAAGCAAACTTCTTGATAATGGAAATACTGATAAAAAAGACTCTAAAATAAAGCAAGAAAGGCGAATGCAGCGAAAACGGAATGCAGCTAAGCCATTTAAATGTGATGTTTGTAACAAGTTGTACACTAAAAGTTGTCATTTGAAAAGGCATATGAGAATACACAATGATGAAAAgccacatgcatgcaaaatatGCAAAGAAAGATACAGTAGGATGGATTCTTTAAAAACCCACATGTTAACACATACAGCAGAAATGCCCACTTGTGATCTATGTGGTAAGAGCTTTTCTACAAAAACGGTTCTCAACAGACACATCTCGCAAATACATTCTGGTGAAAAACCACTGACATGCAAAGTTTGCAATACGTCATTTGCTGTAAGAGACGGTTTGAGGGCGCACATGAAGATTCACGTTGGATATAAACCATTTGTCTGCAGTGTATGTGGCAAATCCTTCTTTGACAAGAGTCAATTGAAAGTGCATACTAGAATACATTCAGGAGATAAGCCATTTGCCTGCGACTTGTGCAACAAGTCATTTACTCAGTTAGCTATATTGAAAAGTCATATGCATACTCATACTGGAGAAAAGCCATACACTTGCACAGTATGCAATAAGTCGTTTAGACATAGATCCACTTTGGCTTATCATACATCACTACATACTGGCGGAAAGCCATATACATGTCCTATATGTAACAGCATATTTGAACTCAAGCCTCTATTACGCAAACACATGGCGACGCATACTGATAACACCTCCCATGTATGCAAAGTCTGTAACAAAGCTTTTATTCAAAGTGTTTGCTTGAGGAAACATATGAAAATTCACACAGAGGAACGACAATATACTTGCAATGTATGTGGAAAATCATTCTTCCGAAGCACCGGCTTGAATAATCACATGAAGGTACATACTGGAGAAAAGCCCTTCACATGTAATGTATGTGGGAAATCATTCTCTCTTAATTCAACTTTAGTGAAGCACAAGCGAATTCACACTGGCGAAAAGCCATATACATGTGATATTTGCAATAAGCAGTTCAGGCTCAGCGGCGCCCTGAGCAGACACATCAAAATGcacactggagaaaagccaTTCAGCTGTAACATATGCAGCAAGTCATTTATTGGAAGTGGTGAACTGAAGAAACATTTGAAGGTACATAGCGAAGAAAAGCCATATACTTGCTACACTTGTACAAAATCTTTCAGAGATAAAAAATCTTTGAAGATTCATATAAGATTGCATACTGGAGAAAAGCCATATACGTGCAATGTGTGCGGCAAGTCCTTTACTCAGAGTAGTAGTTTGAGTATGCATATCAAGAGAGTTCACAGTGAAGAGAAACCTTACAGCTGTACTGTGTGCGGCAAAGCATTCCCATTGAATAGTGTTCTGACCAAACATATGAGAATACACACTAAACACGAGCCACAATAG
Protein Sequence: MCQKSDKICRDLYRNNPQVTEKTLAEHNLGWLHNLTMSPVKTLSTYEDATNDIEIFFKEERSSDDDDDDAFIHEGFETFVDVVKTEDSSQLDAKHNSKEEKFSPNNDNHKLTNSCEKCNKTFETKIRLERHKLTHNKLKSYNCEFCIKTFPKKKLLKIHSIKNHTGEKPYACENCDKRFNRKRLLVEHSRIHSGEKPYSCEVCNKSFAQSSTLRCHMRVHTGEKPHTCDICNESFTRKHSLNKHLRTHTGEKPYTCNTCNKSFSAKSVLTVHMQRHTGERPITCKVCDKTFAVKDGWVAHMRIHTGDKPFICSTCEHSRPTAVCYMCYAQLRRCIRFYEMCQKSEKICRDLFQNNLELTQEFLAKHNLGWIYNLSTTPVNLESYDNSESEISIKEEDTSDDEVLMPMFVEEIKTECIKPHDVTIVGIDFTASKLLDNGNTDKKDSKIKQERRMQRKRNAAKPFKCDVCNKLYTKSCHLKRHMRIHNDEKPHACKICKERYSRMDSLKTHMLTHTAEMPTCDLCGKSFSTKTVLNRHISQIHSGEKPLTCKVCNTSFAVRDGLRAHMKIHVGYKPFVCSVCGKSFFDKSQLKVHTRIHSGDKPFACDLCNKSFTQLAILKSHMHTHTGEKPYTCTVCNKSFRHRSTLAYHTSLHTGGKPYTCPICNSIFELKPLLRKHMATHTDNTSHVCKVCNKAFIQSVCLRKHMKIHTEERQYTCNVCGKSFFRSTGLNNHMKVHTGEKPFTCNVCGKSFSLNSTLVKHKRIHTGEKPYTCDICNKQFRLSGALSRHIKMHTGEKPFSCNICSKSFIGSGELKKHLKVHSEEKPYTCYTCTKSFRDKKSLKIHIRLHTGEKPYTCNVCGKSFTQSSSLSMHIKRVHSEEKPYSCTVCGKAFPLNSVLTKHMRIHTKHEPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01161933;
90% Identity: iTF_01161933;
80% Identity: iTF_01161933;