Prec020151.1
Basic Information
- Insect
- Pasiphila rectangulata
- Gene Symbol
- clz9
- Assembly
- GCA_963082625.1
- Location
- OY720249.1:237614-240046[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-11 3.5e-08 34.2 0.0 4 36 28 60 28 67 0.91 2 2 9.1 5.4e+03 -1.7 0.0 30 43 139 153 139 155 0.84
Sequence Information
- Coding Sequence
- ATGGTGCGTACATATATTAGAAAATATACGAACACAAGAAACGGAAACGCATATCTGCCATATCAAAACTACGATCTTGTAAAGCTTCAAGAAGCAGTAAATTGTGTGAAGGATGGGAGAATGAGCTTAACTCAGGCAGCTAATACATACGGTGTTCCAAAAAGTACTTTGAGTAGGAAAACTCGAAATATCAATTGTACACAAGCAAGCGCTGGCCATCCGACACTATTTACACCCGAAGAAGAGAACATTTTCCTTAAATTCATATTATTAGTAGGAGAATGGGGGTTTCCTTTTGACACAACAGATCTTCGTGTTTATGCCCAGAAATACCTCAATaaaattggtaaaaatatatatgggCTTGAAGACAATTTGCCCGGGGTTGACTGGGCCCGTAATTTTCTTAAAAGACATAGTACACTAGTTTCGAACCGCAAATCTGCGAATATCTCCACAGATCGAGCCAAGACAACGTGCCAGGACATAGATGATTTTTTTGAACATTATACTAAAACTGTTGAGGGGGTTGCTGCAGACTGCATCATAAATTATGATGAAACAAACCTTACTGACGATCCtggtaataaaaattatatatatagaagagGGTGCAAGTATCCAGAGCGCATTATTAATAATTCTAAAACATCGATTTCGCTGATGTTTAGTGGCACTGCGTCTGGCCAACTTTTGCCAATGTATGTGGTGTATAAGTCTGAAAATTTATGGGATACATGGATGGAGGCCGGCCCAGAAGGGACCAGATATAATAGATCCAAAAGTGGATGGTTCGATTCTGTCTGCTTTGAAGACTGGTTTAATACAATTATAATCCCATATGTCCGCAATAAGGCGGGTCCAAAAGTATTAATCGGTGACAATTTGTCATCTCACTTTTCAGAAAGTGTTTTGAGCACTTGTGAAGAATTTAATATAGCATTTGTATGTTTGCCCCCCAAAACTACCCATTTACTTCAACCCCTGGACGTTGCATTTTTTGCTCCTCTTAAGACTTACTGGAGAGATATTCTCACTAAGTGGAAACTTACCGAGGGAAGAAAACACAAAACATTAGTCAAGAGCGCGTTTCCCAAGCTATTGTGTAAACTTAAAGACAAgttagttgaaaaaaataccgaaTCTAATAATTTGAAGGCTGGTTTCAATAAATCTGGACTGTACCCTGTTGATCCCAGTCGTCCTAAATCAAGACTACCCCAATCTGAGACTACCAGACCCGAAGCAGAAATTGAGGATGCTGCATCTTCAGctattactaatattttaatggAAATAAGAAGCCCTGTAGTCGCAGAAGAGGGAACGAGacgaaaaaaaagatttattgtGGAACCAGGAAAGAGCGTAACTGCAGAAGATTTAAGTAAACATCAGAATGAACGAACTGCAATTTCTAAAAcgtcaagaaaaaaaacaacaaaatcttCAAAGTCCAAGCCAGACCAGACGCAGTTAATGCCAGACCAGACAGAGTCGATGCCAGACCAGACGCAGTTGATACCAGACCCATATATTGATCCCATTCCTGGCACCTCTGGATTATGTAACATAAGAAATACAGAAAGTGACATGTCCGGTGAAGAAGTTAATGCCCCTGTTTCCATGCCAATGCCTTCATTAGGACCGATACAGGGTAAAGGTAAAGGTGTAGGAAAAAAAACGAAacctaaaataattgaaataccTTTAAATGAAGGACGACCTAACAAAAAGAGAGCCAAAAAGAAGAAACAGATAAGAAAATCAAAGGATTCATCTACTAGCGTTTCGGACTGCGATATTATGAGTACACACAATGATTCTGACATAGGTGACTGTGTTAGCGACGTAGAGGATGATGAATTTGATTTTGCCTTTGGGTCGAATTCAGAAACTAAAAGTAAGACTGCAGATAAGACTGATTTAGTTAATGCAAATGAAGAGACTGACTTAATCCCGAATACCAAACACTTAGTCGTGAGTGAAATAGCTAATACTAATGAAGACTACGAACATAATCATGAAGACGAGATGGTCATAAGTCAGGACCATTCACATTCCGTTTGCGACGAAATTACAAATACCACAGAAGACTTCGAATGGAACCATGAATCTAATTTGGTTATTAATCAGGACCCTTTATATACTAAAGGTGATTTTGTTTTGGTGCgttatttcattaaaaacacTTGGACATATTATGTTGGAAGTGTTCAAGAAATTAACAAAGAAATTAGCGGATATAAATACACCGTAGTTTTCTTCAAAACTGTAAATAAGCCTTGTCTAGCATTTCGTAAGACAAGATTGATTGATCGTGATATTGTTGGCGATTTGTCTATCGTAAAacaaatttttttaaaagaatctTCAAATAACCGAAATGAGCTCCTTCTAGCTGAGGAGGTTGATATGgtgtattttaaataa
- Protein Sequence
- MVRTYIRKYTNTRNGNAYLPYQNYDLVKLQEAVNCVKDGRMSLTQAANTYGVPKSTLSRKTRNINCTQASAGHPTLFTPEEENIFLKFILLVGEWGFPFDTTDLRVYAQKYLNKIGKNIYGLEDNLPGVDWARNFLKRHSTLVSNRKSANISTDRAKTTCQDIDDFFEHYTKTVEGVAADCIINYDETNLTDDPGNKNYIYRRGCKYPERIINNSKTSISLMFSGTASGQLLPMYVVYKSENLWDTWMEAGPEGTRYNRSKSGWFDSVCFEDWFNTIIIPYVRNKAGPKVLIGDNLSSHFSESVLSTCEEFNIAFVCLPPKTTHLLQPLDVAFFAPLKTYWRDILTKWKLTEGRKHKTLVKSAFPKLLCKLKDKLVEKNTESNNLKAGFNKSGLYPVDPSRPKSRLPQSETTRPEAEIEDAASSAITNILMEIRSPVVAEEGTRRKKRFIVEPGKSVTAEDLSKHQNERTAISKTSRKKTTKSSKSKPDQTQLMPDQTESMPDQTQLIPDPYIDPIPGTSGLCNIRNTESDMSGEEVNAPVSMPMPSLGPIQGKGKGVGKKTKPKIIEIPLNEGRPNKKRAKKKKQIRKSKDSSTSVSDCDIMSTHNDSDIGDCVSDVEDDEFDFAFGSNSETKSKTADKTDLVNANEETDLIPNTKHLVVSEIANTNEDYEHNHEDEMVISQDHSHSVCDEITNTTEDFEWNHESNLVINQDPLYTKGDFVLVRYFIKNTWTYYVGSVQEINKEISGYKYTVVFFKTVNKPCLAFRKTRLIDRDIVGDLSIVKQIFLKESSNNRNELLLAEEVDMVYFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00077417; iTF_00403722; iTF_01209139; iTF_01209140;
- 90% Identity
- iTF_01209139;
- 80% Identity
- -