Csei019794.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cyaniris semiargus
Gene Symbol
clz9
Assembly
GCA_905187585.1
Location
LR994549.1:3339087-3341552[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-08 9e-06 25.8 0.0 4 35 28 59 26 65 0.91

Sequence Information

Coding Sequence
ATGGTGCGTACGTATGTAAGAAAATATACAAATACACGAAATGGAAAAGCATATCTGCCGTATCAAAATTACGAAGATTATCAACTTCAAACAGCAATAAATTGTGTGAAGGACGGAAAAATGTCCTTAACTGAAGCGGTGAATACTTATGGTGTTCCAAAAAGTACGTTGAGTAGAAAAACTCGTAATGTCAATTGTACACAAGCAAGCGCTGGCCATCCGACACTATTTACTCCCGAAGAAGAGAAAATATTTCTCAAATACATATTATTGATAGGAGACTGGGGGTTTCCTTATGATGCAACAGATATTCGTATTTTTGCCCAGAAATACCTCAATAAAATTGGTAAAAATATATATCGGCTTGAAAACAATTTACCCGGGGTTGACTGGGCGCGTAATTTTCTAAAAAGACATGGTAAGATAGTTTCGAACCGCAAATCTGCGAATATCTCCACAGATCGAGCTAAGATAACATGCCAGGATATAGATAACTTTTTTGAACACTATACTAAAACTATTGAGGGAGTTCCTGCAGACTGCATCATAAATTATGATGAAACAAACCTTACTGATGATCCCGGTAGTAAAAAATATATATATAGAAGAGGATGCAAGTATCCAGAGCGCATTATTAGTAATTCTAAAACATCAATTTCGTTGATGTTTAGTGGCACTGCGTCTGGCCAACTTTTGCCAATATATGTGGTGTACAAATCGGAAAATTTATGGGATACATGGATGGAGGGTGGTCCAGAAGGGAAGAGATATAATAGATCCAAAAGTGGATGGTTCGATTCAGTATGCTTTGAGGACTGGTTTAATACAATTATAGTCCCATATGTCCGCAATAAGACGGGTCCAAAAGTATTAGTCGGTGATAATTTGTCATCTCACTTTTCAGAAAGTGTTTTAAAACTTTGTGAAGAATTTAATATTTCATTTGTATGTTTGCCCCCCAAATCTACGCATTTACTTCAGCCCCTAGACGTAGCCTTTTTTGCTCCTCTTAAGACTTACTGGAGAGATGTCCTCACTAAGTGGAAACTTACTGAGGGAAGAAAACACAAAACATTAGTGAAGAGTGCATTTCCTAAACTATTGTGTAAACTCAAAAACAAGTTAGTTGAAAAAGATGCCGAAGTTAATAATTTGAAGGCTGGTTTTAACAAATCTGGACTGTACCCTGTTGATCCCAATCGTCCTAAATCAAGGCTACCCCAACAAGTGACTACCAGGCCCGAAGCAGAAATAGAGGATGCTGCATCTACAGCTATAACTAATATGTTAATGGAAATACGAAGCCCTTTAGTCATAGAAGATAGAACGAGACGAAAGAAGAGATTTATTGTTGAACCAGGTAAGAGCGTAACTGCAGAAGATTTAAGTAAATATCAGAATGAAAAATCAGAACTGTCAAAAAGAAAGAAAACGTCAAATAAAAAAACAGAAATTTCTAAAACGTCAAGAAAAAAAATACGAAAATCTTCTTCGAAGTCAGAACCAGAACAGACGCAGCTAATACCAGATCAGACAGAGTCGATGCCAGACCAGACGCAGGGGATACTAGATCCATATTATGTTGATCCAATTCCTGGCCCCTCTGGGTTATGTAACACAAACAATACAGATAGTGAAAAGTCCGTTGAAGACGTTCATGTTCCTGTTTCCATGTCAATAGCTTCAATAAGATCAATTGAGGGTAAAGGAAAAGGTGTAGGAAAAAAAACTAAACCTAAAGTAATCGAAAAACCGTTAAATGAAGAAAAACCTAACAAAAAGAGAGCCAAAAAGAGGAAATCAAAGGATTCATCTACTACTAGCATTTCGGACTGCGATATTATGAGTACACACAATGATTCCGACATAGATGACTGTGTTAGTGACGCAGAGGATGATGAATTTGATTTTGCCTTTGGGTCTAATTTAGAAAATAAAACTAAGACTGCAGATAAGACTGATTTAATTAAAACAAATGAAGAGACTGACTTAATTCCAAATGCCAAACACTTTGCTAGTCAAATATTTAATACTGACGTACACTACGAACATCATCGTGAAGACGAGCTGATCATAAATCAGGACCACTCACATTCAGTTTGCGATGAAATGACGAATATCACAGAAAATTTCGAACACCATGAATCTCATTTGGTTATTAGCGATGACCCTCTATATAATGAAGGTGATTTCGTTTTGGTGCGTTATTTTATTAAAAAGACTTGGACATATTATGTTGGAAATGTTCAAGAAATTAACAAAGAAATTAGCGGACGATATAAGTACACCGTAGTTTTCTTCAAAACTGTAAAAAATCCTCGTCTAGCATTTCGTAAGACAAGATTGATTGATCGTGATATTGTTGACGATTTGTCTATAGTTAAACAAATATTCCTTAAAGAATCTTCATTCAACCGAAATGAGCTCCTTTTAGCTCATGAGAGTGATATAGTGTATTTTGAATAG
Protein Sequence
MVRTYVRKYTNTRNGKAYLPYQNYEDYQLQTAINCVKDGKMSLTEAVNTYGVPKSTLSRKTRNVNCTQASAGHPTLFTPEEEKIFLKYILLIGDWGFPYDATDIRIFAQKYLNKIGKNIYRLENNLPGVDWARNFLKRHGKIVSNRKSANISTDRAKITCQDIDNFFEHYTKTIEGVPADCIINYDETNLTDDPGSKKYIYRRGCKYPERIISNSKTSISLMFSGTASGQLLPIYVVYKSENLWDTWMEGGPEGKRYNRSKSGWFDSVCFEDWFNTIIVPYVRNKTGPKVLVGDNLSSHFSESVLKLCEEFNISFVCLPPKSTHLLQPLDVAFFAPLKTYWRDVLTKWKLTEGRKHKTLVKSAFPKLLCKLKNKLVEKDAEVNNLKAGFNKSGLYPVDPNRPKSRLPQQVTTRPEAEIEDAASTAITNMLMEIRSPLVIEDRTRRKKRFIVEPGKSVTAEDLSKYQNEKSELSKRKKTSNKKTEISKTSRKKIRKSSSKSEPEQTQLIPDQTESMPDQTQGILDPYYVDPIPGPSGLCNTNNTDSEKSVEDVHVPVSMSIASIRSIEGKGKGVGKKTKPKVIEKPLNEEKPNKKRAKKRKSKDSSTTSISDCDIMSTHNDSDIDDCVSDAEDDEFDFAFGSNLENKTKTADKTDLIKTNEETDLIPNAKHFASQIFNTDVHYEHHREDELIINQDHSHSVCDEMTNITENFEHHESHLVISDDPLYNEGDFVLVRYFIKKTWTYYVGNVQEINKEISGRYKYTVVFFKTVKNPRLAFRKTRLIDRDIVDDLSIVKQIFLKESSFNRNELLLAHESDIVYFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01161256;
90% Identity
-
80% Identity
-