Pste009986.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parochlus steinenii
Gene Symbol
SLC25A17
Assembly
None
Location
scaffold17:341026-347317[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0012 0.047 13.8 4.8 1 23 378 400 378 400 0.95
2 12 4.1e-06 0.00017 21.5 0.4 2 23 611 632 610 632 0.98
3 12 1.1e-05 0.00045 20.1 0.7 1 23 638 660 638 660 0.99
4 12 2e-06 8e-05 22.5 3.9 1 23 666 688 666 688 0.98
5 12 1.9e-06 7.7e-05 22.5 3.2 1 23 694 716 694 716 0.99
6 12 0.0036 0.14 12.3 2.9 3 23 724 744 722 744 0.96
7 12 1e-05 0.00041 20.3 0.6 1 23 750 772 750 772 0.96
8 12 1.7e-07 6.8e-06 25.9 2.7 1 23 779 801 779 801 0.99
9 12 0.00059 0.024 14.7 0.4 1 23 807 829 807 829 0.99
10 12 2.9e-07 1.2e-05 25.1 2.0 1 23 835 857 835 857 0.99
11 12 3.6e-05 0.0014 18.5 1.2 5 23 861 879 860 879 0.96
12 12 1.9e-07 7.8e-06 25.7 2.2 1 23 885 907 885 907 0.98

Sequence Information

Coding Sequence
ATGGCAAACTCCAAAGAATTGAAGGATGTCTTCAACTACAACTCTCTCGTGCACGCAATTAGTGGTTCAGTGGGAAGCATCGTTGCTATGTCTGCTTTCTATCCGTTTGACACAGTTCGATCACGATTGCAATTAGGTGGAATTAAGAATAGCAAAAATGAATCTACATTCCAGCTCATATTAAGTCTTTTGAATAATGAGGGAGTTGCTAATCGTGGGATAAAGCCAGTTCTACAAAGTGTATTGCTCTCTAATTTTGTGTACTTTTACACATTTCACACGCTCAAAGCTCTGCGAAGTAAAGGTGCCAATGCTACAGTAGGAAGTGATTTGATTTTGGGAGCTTTAGCTGGAGTTGTCAACGTTCTCAGCACTACTCCCTTTTGGGTCGCGAACACTCGCTTGAAGATGAAAGGAATCCGTTCAGATTTCAACTTACCCTACGATAATCTGGTAGATGGATTAAAACATATCTTCAAAACTGAAGGAGTCGCTGGATTATGGTCAGGCACAATGCCATCACTTATGTTGGTATCAAATCCTGCCATTCAGTTTGCATGCTACGAGGCTATCAAGAGGAATTTAATGAAAGTTTATGGACAGCAGTTGCCAGCTATTTCATATTTCTTTATTGGAGCGCTCGCTAAATCAATTTCAACGGTCATCACTTATCCCTTGCAGTTGATTCAAACTAAACTACGTCACGGCTCCAAAGACAACTTACCGGCAAAAGCTGGAGTTATGGATATGCTTTTCTTCATATTAAAGAGAAACGGAGTTCAGGGACTATTTGTTGGACTCAACGCCAAGTTATGGCAAACTGTATTAACAGCTTCTTTCATGTTTTACACGTATGAAAAGATAAGGAGATTCTCTACATACTTTGAGGGCCAACCAACAAATTATCCAAATAACAAGATGCTGCAAACTAAATATGGAGCAGTGGACTCTCAAAACAATCCCATCAATACTCAGAATCAACACATTAGTTTACCGAAAAATATGCCGCTCCATACACAAGGCTTCGGTTTCAATATTCCTGTACAAATCCTCAGCCCATTTGGCCACTCCCARGTTATCATCTCCACAGACCAAAAACTAAACCCAGCTCTGATGGGAATTGAGAAAAATCACGACTGCCATATTTGCCATAAAAAATTTCCAAATCTCTCAAATYTMAATGCTCACATTATTCAGCATGTAGACGCACAGGAAGCAGCATTCAGAAATATTGTAACAGCTTCATCAGCTGKTAATCATTCTGCTGCAAATTTGATGAGCAGTGGTTTGGTAAAACATCATAATCATCAAATYAACTCAATTGTGGATTATCAGCATAATATCAGCAATCAGAGTAACGGAAATGAAGTAAAAAGTCATCAGCCGCAAGCCACATTYGAAATTAAATCCAGYAACCTCCATGAATACACAATTGTTAACACTACACCACAAATCATTCAGCAGCAATCTCGTGAAAGGGAGAAAAATGTGATACAAATGGTTTCAAATCTCAAACAAGTCCCTGTTGAATATCACATTCAGCAACAGCAACACGCCGCAGCAATTGTAGCAGCTATGAACCAACCTCATGGTAGTTCTTCTAAAAGTGCCATAAATTCGTTCGTGAACAGCACAATAAAATTCGAACATAACTCACCGCCAATTCAGGCCTCTGAAGTTTATCCCAATTCTCAGATGATTGTGGATACTCAGACTAACGAGGACATGCAATCAACGCCATCTTCAGCGTCTTCACCTATTTCTAATCATCAGACTACAACTCCAACACCGACGGCCAATGGAGTTGATAGTGTTTCAGGAGCAGCCTWCAAGTGCCAAGTGTGTGACAAAGCKTTTACAACGATGGGAAATCTCAATTTGCATATCAAAATTCATTCAGGAGAAAAGCCATACAAGTGCAGTGTCTGTTTTAAAGGATTCATACAAAGCAATAATTTAGCGACTCATTTAAAAATACATACAGGAGAACGACCTCACGAGTGTTCTGTTTGCCTTAAACGGTTTTCACAGTCTAATAATCTAAAGACACATATGAGAACCCACACGGGTGAACGGCCATACAGCTGCACCTTATGTTCCAAAACTTTTAATCAGAAAAACAACTTATCTACCCATCTTCGYACTCATGCTGATTATCATCCGTCGAATTGCAGTATTTGCTCCCAGCACTTTTCCAGTTTYAACGAATTGTTTTATCATATGAGAGATCACACCGATGAAAAACCCCACATTTGCTCGATATGCAACAAAGTATTTTCTCAACTGCCCGAACTAAATGAACACATCAAGCAGCATTCAAATCCAACAAAACCCTTCCAGTGTAACATTTGCCAAAAACAATTTTCTCAGTCAAACAATTTAAAAACTCACATCAAGACACACATCTATCAAGATCCGTTCAAGTGCAATATGTGTTCGCGCTCTTTTCAAGAAGAGGAAGAATATGCTCTACACATCAGGATTCATTCTCTGGACAAACCGTATGAATGTACCTTCTGTGGCAAAAAGTTTATACAAAGCAATAATTTGAAGACACATGTTAGAACCCACACGGGCACGCAGTGTTCCAAGACATTTAATCAAAAGAACAACCTAAACACACATATGAGAGTCCACACGGGTGAGAAGCCTTTCGAGTGCACGATCTGTGATCGAAGGTTCAATCAATCAAATAACCTCAACAAGCATTTAAAGACCCATGGCCAAGAGAAAGAACTCACTCAGCAAATGGAAAACGAGATGGAAAAAATGATGAACACCGTTATCAATCAGAGCTAG
Protein Sequence
MANSKELKDVFNYNSLVHAISGSVGSIVAMSAFYPFDTVRSRLQLGGIKNSKNESTFQLILSLLNNEGVANRGIKPVLQSVLLSNFVYFYTFHTLKALRSKGANATVGSDLILGALAGVVNVLSTTPFWVANTRLKMKGIRSDFNLPYDNLVDGLKHIFKTEGVAGLWSGTMPSLMLVSNPAIQFACYEAIKRNLMKVYGQQLPAISYFFIGALAKSISTVITYPLQLIQTKLRHGSKDNLPAKAGVMDMLFFILKRNGVQGLFVGLNAKLWQTVLTASFMFYTYEKIRRFSTYFEGQPTNYPNNKMLQTKYGAVDSQNNPINTQNQHISLPKNMPLHTQGFGFNIPVQILSPFGHSQVIISTDQKLNPALMGIEKNHDCHICHKKFPNLSNXNAHIIQHVDAQEAAFRNIVTASSAXNHSAANLMSSGLVKHHNHQINSIVDYQHNISNQSNGNEVKSHQPQATFEIKSSNLHEYTIVNTTPQIIQQQSREREKNVIQMVSNLKQVPVEYHIQQQQHAAAIVAAMNQPHGSSSKSAINSFVNSTIKFEHNSPPIQASEVYPNSQMIVDTQTNEDMQSTPSSASSPISNHQTTTPTPTANGVDSVSGAAXKCQVCDKAFTTMGNLNLHIKIHSGEKPYKCSVCFKGFIQSNNLATHLKIHTGERPHECSVCLKRFSQSNNLKTHMRTHTGERPYSCTLCSKTFNQKNNLSTHLRTHADYHPSNCSICSQHFSSFNELFYHMRDHTDEKPHICSICNKVFSQLPELNEHIKQHSNPTKPFQCNICQKQFSQSNNLKTHIKTHIYQDPFKCNMCSRSFQEEEEYALHIRIHSLDKPYECTFCGKKFIQSNNLKTHVRTHTGTQCSKTFNQKNNLNTHMRVHTGEKPFECTICDRRFNQSNNLNKHLKTHGQEKELTQQMENEMEKMMNTVINQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01160985;
90% Identity
iTF_01160985;
80% Identity
iTF_01160985;