Pste009248.1
Basic Information
- Insect
- Parochlus steinenii
- Gene Symbol
- Hr39
- Assembly
- None
- Location
- scaffold356:34947-37978[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.24 1.1e+03 -1.7 5.2 73 151 182 267 154 332 0.52 2 5 1.7e-09 7.7e-06 25.1 0.0 1 44 399 444 399 463 0.78 3 5 0.0045 20 4.0 0.0 94 132 462 498 451 521 0.72 4 5 2e-13 9e-10 38.1 0.1 203 239 520 556 503 557 0.86 5 5 5.2e-38 2.3e-34 119.1 0.1 295 408 557 671 556 671 0.98
Sequence Information
- Coding Sequence
- ATGTCTAATGCCACCGCTACAAGTCAGTCGCCTGCATCAGCAATAAGCCGAGGAAATGTATCAGTGACTAATATAAATTGCGAGCTGGACAGTAAAATCACCGAGAATGGTGTCGCTGATTCGGATTGCAAGAGTTTCGCCAACATTGCATTGGCGCCTAAAATGGAAGAGTCAGATGATGGCTCAGATAGTGAACTATCTAATATTGAGAAGACAGCTAAAGTTAATATGCGACAGCTGAATACTCTAACTAACGGCCAAAGACCCATGTCATGGGATGCGGCGGATTTGAGTGAGACTGAGATGATGGAAGTAGAAAAGAGTGGCAGTCCATCTGTGGAAGAATCCAAATCTAAGATGCCATCAATTAGTGAAGATGTTAAACCTAAACTACWCTTACTGGATGATAAAACAGTWATCAADCCAGAAATATGTACTCCCACTAAAGAAATAGTTGGGAACTCGAATGGTCTTCCACAATTTCCAAAAAAATATCCTGAAATAATGAATCTAAAGTTTGAACCAAACACGTCTGGCTATCAGGAAGTTAATCATAGTCCTTTGCTGGTACGCTCAAAACAGTCTCTCTTGCCAGCTAATCCTAGCCCAGATTCTGCCATCCACTCTATCTACACACAAAGTTCTCCCAGTCAATCGCCACTTACATCAAGGCACGCACCTTACACACCTTCCTTAAGTCGCAATAACAGTGATGCTTCTCACAGTAGTTGCTATTCATACAGCTCAGAGTTCAACAGTCCAACTCACTCACCTATTCAAGGCCGCCATCCCATTTACGCATCTACTTCCAATTCACAGCAATTTAATGGATCCTTACATCACTCGTTGCTTTATCGACCTATGCTGGACAGTGACGCTTCCAATTACCGTCTTACGCACGGACATCACGGAGAAGAAAATAACAATGACCAGTCTGATCAAATTCCGACCGCAGGCATTTCAAGGCAACAACTGATCAACAGTCCATGCCCCATTTGCGGAGACAARATTTCTGGTTTTCATTATGGAATTTTTTCCTGCGAATCATGTAAAGGTTTTTTCAAGCGAACCGTCCAAAATCGCAAGAATTATGTTTGTCTGAGAGGAGCAGCGTGTCCTGTAACAGTGACCACACGTAAAAAATGTCCTGCTTGCAGGTTYGAAAAGTGTTTGCAAAAAGGTATGAAATTGGAAGCAATTAGAGAAGATCGAACTCGAGGGGGCAGGTCAACATATCAATGTTCATACACACTTCCTTCCACATCATTGTCCAATCTTCAAGTAAACGATAGTGCCTACAAAATGAATAGCAATGGCATGAAGATGGAGCATTTAGAGAGCAACGGCCTGAAATTGTTGAACAACAATGGCAATTCAATGAACATGAAACCAGGAATTCCTCCAYTACTGCAGGAAATTATGGATGTAGAGTATTTRTGGCAGTACAACGAAAGTGARTTAATTCGATTAAATCAAACGTCAGCCAGCACRGAACCGTCCATCACAACTGCTTCCATCCAAAATAATCCACTGCTAGCCAGTGCAGGGCTCTCTAGTGACAATTCAAGTCCAGATATGATAGCCAATCTTTGCAAAATTGCRGATCATAGRTTGTACAAGATTGTTAAGTGGTGCAAGAGTTTGCCACTGTTTAAGAACATTTCGGTCTGCATCGAGCGAATGCTCAACCTGACTGACCACCTTAGACGACTGAAAGTGGACACCTACGAGTATGTCGCAATGAAAGTCATAGTTTTATTGTCGTCAGGTGATACTTCTGAGCTWAAAGAGCCGGARAAGGTTAGAGCTAGCCARGAAAAGGCACTGCAAGCACTTCAAGCTTATACGTTGGGCCATTATCCGGATACTCCCGCAAAATTTGGGGAGCTTTTATTGAGGATCCCGGAACTTCAAAGGACTTGTCAAGTCGGTAAAGAAATGCTGACAATCAAATCGAAAGAAGGCGAGGAGCCCAGCTTCAACTTACTGATGGAGCTGCTGCGCGGCGAGCATTGA
- Protein Sequence
- MSNATATSQSPASAISRGNVSVTNINCELDSKITENGVADSDCKSFANIALAPKMEESDDGSDSELSNIEKTAKVNMRQLNTLTNGQRPMSWDAADLSETEMMEVEKSGSPSVEESKSKMPSISEDVKPKLXLLDDKTVIXPEICTPTKEIVGNSNGLPQFPKKYPEIMNLKFEPNTSGYQEVNHSPLLVRSKQSLLPANPSPDSAIHSIYTQSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFNSPTHSPIQGRHPIYASTSNSQQFNGSLHHSLLYRPMLDSDASNYRLTHGHHGEENNNDQSDQIPTAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVTTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPSTSLSNLQVNDSAYKMNSNGMKMEHLESNGLKLLNNNGNSMNMKPGIPPLLQEIMDVEYLWQYNESELIRLNQTSASTEPSITTASIQNNPLLASAGLSSDNSSPDMIANLCKIADHRLYKIVKWCKSLPLFKNISVCIERMLNLTDHLRRLKVDTYEYVAMKVIVLLSSGDTSELKEPEKVRASQEKALQALQAYTLGHYPDTPAKFGELLLRIPELQRTCQVGKEMLTIKSKEGEEPSFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01160549;
- 90% Identity
- iTF_01160549;
- 80% Identity
- iTF_01160549;