Basic Information

Insect: Parnassius smintheus
Gene Symbol: zfh1
Assembly: GCA_036936625.1
Location: JAUPFT010000006.1:55501454-55512458[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.08 26 7.8 1.1 1 23 818 840 818 840 0.94

2 8 0.00072 0.23 14.2 3.5 1 23 851 873 851 873 0.98

3 8 2.9e-06 0.00095 21.7 6.2 1 23 882 904 882 904 0.99

4 8 0.00021 0.067 15.9 1.0 1 21 910 930 910 931 0.95

5 8 0.015 5 10.0 1.2 1 21 1195 1215 1195 1216 0.93

6 8 1.3e-05 0.0041 19.7 1.4 1 23 1514 1536 1514 1536 0.94

7 8 3e-05 0.0097 18.6 7.4 1 23 1542 1564 1542 1564 0.98

8 8 0.11 35 7.3 7.1 1 21 1570 1590 1570 1591 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.08	26	7.8	1.1	1	23	818	840	818	840	0.94
2	8	0.00072	0.23	14.2	3.5	1	23	851	873	851	873	0.98
3	8	2.9e-06	0.00095	21.7	6.2	1	23	882	904	882	904	0.99
4	8	0.00021	0.067	15.9	1.0	1	21	910	930	910	931	0.95
5	8	0.015	5	10.0	1.2	1	21	1195	1215	1195	1216	0.93
6	8	1.3e-05	0.0041	19.7	1.4	1	23	1514	1536	1514	1536	0.94
7	8	3e-05	0.0097	18.6	7.4	1	23	1542	1564	1542	1564	0.98
8	8	0.11	35	7.3	7.1	1	21	1570	1590	1570	1591	0.96

Sequence Information

Coding Sequence: atgtcgaAAAAACAAAAGaaaaccGTTAAAGACCACGAAATTGAAAACATCCTCCAATATTGGCAGTCGTCGGAAGAGAGTAGCGAGGATGACGATTGCGAGGCGAGTCTTAAAGATTACTATTCTCAAGTTATGGACACTGCTTTGGACAACATGCAAGGTATTTCGAATGACGATTTGTTGCATATACTTGAGAGTAGTCCTGCACAAGCACAACTGTTACAAGAAAATGACCACTATTTGTCAAATTCAGACCAGGAGGTTCGGCATGTCGACAAGAAATATAAATCACATCTTTTATCGAAATCTTTACTTGCTGATGCAATGCTAGGTCCATCACAGGGCGACACAGAAGCTTCATCTAAGTGTCCACCAAAGCGCACACTATCTACTTTAATATGCAGGTGCAGAGATTGCTTGTCTCAGCGTCCACCAGCACACGACACACCAGAACCTGTGGCCAGCACATCACAGTTTTTGAAGACACCGGTACATCTGGACAATGCTGTTTCTGGTCATTCCCAGCTTTCACCTATGTCTCAGCGTCCACCAGCACACGACACACCAGAACCTGTGGCCAGAACGTCCCAGTTTTTGCAGACACCGGCACATCTGGAAAATGCTGTTTTTGGCCCTTCCCAGCTTTCACCAACGCTACCTGGTGCCAGGACAATCTCACCCGATGCTTCACCAGAATATACATTTCCGTATAACACCGCGACAACTTCATCTCAACATCTGCCGAAATCTAAGTTTCCACATACCAACAAAGAAAGTGTGTCTCAGAGTCTGGGAGATTGTGAGCAAACTCCTGAGGTTATAGTTGAACAAGAAGAGATGGCCATTTCCTTAGCTCCCGACGATGATCAACTTTGTGTGCTACTTGAGCCAACTTATGCTGAATTACAGACGAAGCAAAGAAAGTGGAGTACAAAAGTAGGTTACTTTGAAGATCGTGATTTTAGTAGACAGTTACAACCTACTACAAAACACGACAACAGAGGTACCCCATTTGACCATTTTATGGATATGTTCCCTGATGAATTATTTCAGCTCATTGTCGAAAACACCAACAAGTATGCGATCTTAAAAGGCAGCCAGTTTTGGAAGGATGTAGACAGTAATGAAATTAAGGCATTCTTGGCTATAGTGATTCTTATGGGAATTGCCCCACAATCAGATATCGAATTATACTGGAATTCAGACCCATTTTACAATAATCAGGAAATATCTGGAACAATGCCttgtaaaagatttaaaaaaatattagagaatATACACGTTTGCGATATTACTACTCATTTACCACAAAATCATAAAGATCATGATAAACTTCAAAAAATAAGGCCAATGttgaacattttaaataaaacttttcaaGAAAACGCTACCAATTCTCAATCACAATCAATTGATGAAAGCATGATAAAGTTTAAAGGTCGTGATTCCAAAAAACAGTATATGCCGGGTAAACCGATTAAACGAGGGTACAAGGCGTGGTGTAGATGTGATGCGAAAACAGGATACCTTTACCAATGTGACATCTATACAGGTAAAGATAAAAATGCCGACAGTGAAGGACTGGGTTACAGAGTGGTGAAAAATCTTTGTGTTAACGTACCAAAGGACACATTGATAgtctttgacaattttttttcctctgtcgctcttttggaatatttatattacaaaggaATATTTGCCATTGGTACTGTTAGACTATCACGAAAAGGACTTCCTGAAGATTTTGTCAAAAAAGAAAGTAAGAAAGAACAACTACAACCAGGAGAATTCACATACAGATACTGTCACCCTGTTGGGGTAGTTAAGTGGAAAGATACTAAAGACGTGACCGTCCTTACAACAGCCGTAAACCCTAGAAAAATAGAACTAATAGAAAGAAGACAAAAGAATGGCGAAAAGAAGAAAATGTATTGCCCATCTGCTATTGCTGATTACACCCGAAACATGGGTGGAGTTGATCATTTTGATCATTACCGTAGCTCATACTCCATTGGACGCAGATCCAAAAAAACATGGCCAAGattgttttggtttttatttgaGTGTGCTGTAATAAATGCTTATATCATATATCAACATGAAAATGAAACAAGGAAAAACATACATCGAGATTTTCGTTTGCGTTTGGCCAGAAAATTAAAGTCTGAGtacataaatattcaaaaagGCAACCCAATAATTtggaaaaataaaaaaggagGAGTGTTTGGCGTCCCAGATGAGTTAAGACTGGGTTACAAAGGGCAGCATTACTTGGAACCCATGACCACTAGAAAGAGGTGCAAATTCTGTAGTACGAGACAGAAGGATACCCGTTCGAAGTACATGTGCCAAATATTCCGTCCACTTGCCGGTGGAGGAACGGAGGGCAAGCCGTTGGAGGAGGAGGAGGAGAGGGGCGGGTCCCCGCTGGGGCCCGGCGGACCCTTCCACTGCAGCCAGTGCCGCGGCGCGTACCCCACGCGCGAGCAGCTCGAGCGCCACGAGACCCTGCACTCGCCCAGCACACAGGTGGATACAGACAAATATACTTGCAAGATCTGCCACAAGAGCTTTTTGAATGTGTACCGATTGCAACGGCACATGATTAGCCACGACGAGAGCGCACTATTACGCAAATTTAAATGCAACGACTGCGACAAAGCTTTCAAATTTAAACACCATCTTAAGGAACATCTTCGAATACATAGCGGCGAAAAGCCCTtcgaatgtgccaactgtggaaAGAAGTTCTCCCACTCCGGCTCATACTCGAGCCATATGACCTCTAAAAAGTGTCTTGTTATGAATTTAAAAATGGGTCGAATAAAACCCAATAATCCAGCTCTTAATCCTGATCGTAGTCCTTCACGAAAACGGGCAAACGCCATGGTTGCGTCACagcttaataataatatagtgcCAAATGGAAACTCTTTCCTACCAATCATGCCTAAGTACAATGATGCTGCAGCGTTTTTCGCCTCAATGTCATCTCAGGAAAATAATTTCCATCGTACTCCTCTAGGTCAGCCTGGAATTAACCCATTCTATATGCCTCCTGGTATGCCGATGAGCCCTGCAAGTGGTATTGCACCATACAGTTTCCCTACTTCGCTAAGTCAACTGTTTGAGCAAATAGCCTCAACACAGTATCAACAAAGAAAAGTAGAAAATATAATAAGTCCGAAACAAAACAGCCCTAGAACTGGAGACCCTGAAGATTTGATAGAAGAAGTTACAGAAGAAGAAGACAAACGATCCGAATGTAGCGCAGAGCTGGTGATGGATATAGAAGATGATGAAACTCTGACTGTGAAAAAAGAACAAGACGAACTAGAAAGTGAAATTCGACCGCAATCTCGTAACCTCGAATCCGTCCCtttaaataataacagtgaaGCTGATAATAATGACCCAAATTTCGATAAAATGTTGAAATCCTTAGGTGCATCTGTTACGAAGCACTTTTTTAAAGCAAACATTGAAAACCTTACTCCCGCTTCGGGGGGAATTTATCCCAGCATTGAATCACCACCTACACCACAAACTTTAGTTAAAAGAGAGCCTGAGGACGATCACACATGTGTTAAATGTAATTTGACattcaaatacaaaaatgatTTATTAGAGCACGAAAAATTAGTTTGCGGAAATCTCTTCAGAAAACATGAAGGTCTAGCTGCTCAAGTAGCTGAAACCGTAGCTCTTAACAGATTGGAATCTGAAATGAGGGCATCTATGCAAAGCGGAGTGAGCGCTAGTGAAGACGAAGATTTTTCTAAAGATCGCGATGATAAAATGTCTATTCACGATGCGGACAGAAAAATTAGAGTGCGAACTGCTTTAAGTGAGGAACAgcaattaattttaaaagaacATTATGCTATAAACCCGCGACCGAACCGcgaggaatttaaaaaaattgcacagCAAATTGGACTTGACAACAGAGTTGTCCAAGTGTGGTTTCAAAACAATAGAGCTAGAGTAAGAAGAATGACTCAGTCCGTAGCAGTTTCAGATCAACCATTAGATTTGTCAACTAAAAAGTCTAGCTTATCGGTTACATCTAGTCCATCTCCATCACCACCATGCAGCATTTCTGTCACACATTCCGATTCCGAGGAAGCAGTGAATCTAAGTCAAAAATCATCGCGCAGTACAACACCGCAACGCCCGAGTCATTTAAATACGTATTCACATTCCAATTGCTCTTCCTCTTCATTCACTGATTTTAGACTATCACCATCACCAGGTGAAATAATGAATGGTCAGAAACGGCCACTCTCTCAAAAACTTCCCATTAATCCTGTTATGCCGATGGATAAGCTTCTCCAATACAACGATATGTCAAAAGCGCGATCTCCGATTCTTAACATGCATATGGCAGCAGACCCTAATCGACAAGGATTGAGTCCATGCTACGATCGTCCAACATGGGATGATATGCAACCTCCTAACGAATTTGAGGACGATACTTCACTAATTAAGAAGAGTAAACTAAAAACGGAACTAAAGGAGGGGGAAGGACAATTCGTTTGTAATCAATGCGATAAAACGTTTGTGAAGCAAAGTTCGTTGGCCAGGCATAAATATGAACATTCAGGTCAACGTCCATACAAATGTGAGGAGTGCCCGAAAGCTTTCAAGCACAAACACCATTTAACGGAGCATAAGCGGCTGCATACCGGAGAGAAGCCCTTCCAGTGCTGCAAATGTCTCAAGAAGTTCTCGCACTCCGGCTCCTACAGCCAGCACATGAACCACAGATTTGCCATCTGCAAGCCCTACAGAGACTAG
Protein Sequence: MSKKQKKTVKDHEIENILQYWQSSEESSEDDDCEASLKDYYSQVMDTALDNMQGISNDDLLHILESSPAQAQLLQENDHYLSNSDQEVRHVDKKYKSHLLSKSLLADAMLGPSQGDTEASSKCPPKRTLSTLICRCRDCLSQRPPAHDTPEPVASTSQFLKTPVHLDNAVSGHSQLSPMSQRPPAHDTPEPVARTSQFLQTPAHLENAVFGPSQLSPTLPGARTISPDASPEYTFPYNTATTSSQHLPKSKFPHTNKESVSQSLGDCEQTPEVIVEQEEMAISLAPDDDQLCVLLEPTYAELQTKQRKWSTKVGYFEDRDFSRQLQPTTKHDNRGTPFDHFMDMFPDELFQLIVENTNKYAILKGSQFWKDVDSNEIKAFLAIVILMGIAPQSDIELYWNSDPFYNNQEISGTMPCKRFKKILENIHVCDITTHLPQNHKDHDKLQKIRPMLNILNKTFQENATNSQSQSIDESMIKFKGRDSKKQYMPGKPIKRGYKAWCRCDAKTGYLYQCDIYTGKDKNADSEGLGYRVVKNLCVNVPKDTLIVFDNFFSSVALLEYLYYKGIFAIGTVRLSRKGLPEDFVKKESKKEQLQPGEFTYRYCHPVGVVKWKDTKDVTVLTTAVNPRKIELIERRQKNGEKKKMYCPSAIADYTRNMGGVDHFDHYRSSYSIGRRSKKTWPRLFWFLFECAVINAYIIYQHENETRKNIHRDFRLRLARKLKSEYINIQKGNPIIWKNKKGGVFGVPDELRLGYKGQHYLEPMTTRKRCKFCSTRQKDTRSKYMCQIFRPLAGGGTEGKPLEEEEERGGSPLGPGGPFHCSQCRGAYPTREQLERHETLHSPSTQVDTDKYTCKICHKSFLNVYRLQRHMISHDESALLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPDRSPSRKRANAMVASQLNNNIVPNGNSFLPIMPKYNDAAAFFASMSSQENNFHRTPLGQPGINPFYMPPGMPMSPASGIAPYSFPTSLSQLFEQIASTQYQQRKVENIISPKQNSPRTGDPEDLIEEVTEEEDKRSECSAELVMDIEDDETLTVKKEQDELESEIRPQSRNLESVPLNNNSEADNNDPNFDKMLKSLGASVTKHFFKANIENLTPASGGIYPSIESPPTPQTLVKREPEDDHTCVKCNLTFKYKNDLLEHEKLVCGNLFRKHEGLAAQVAETVALNRLESEMRASMQSGVSASEDEDFSKDRDDKMSIHDADRKIRVRTALSEEQQLILKEHYAINPRPNREEFKKIAQQIGLDNRVVQVWFQNNRARVRRMTQSVAVSDQPLDLSTKKSSLSVTSSPSPSPPCSISVTHSDSEEAVNLSQKSSRSTTPQRPSHLNTYSHSNCSSSSFTDFRLSPSPGEIMNGQKRPLSQKLPINPVMPMDKLLQYNDMSKARSPILNMHMAADPNRQGLSPCYDRPTWDDMQPPNEFEDDTSLIKKSKLKTELKEGEGQFVCNQCDKTFVKQSSLARHKYEHSGQRPYKCEECPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01158588;
90% Identity: iTF_01158588;
80% Identity: iTF_01158588;