Psmi031074.1
Basic Information
- Insect
- Parnassius smintheus
- Gene Symbol
- clz9
- Assembly
- GCA_036936625.1
- Location
- JAUPFT010000011.1:24506902-24508092[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-07 4.6e-05 25.3 0.1 1 36 14 50 14 59 0.86
Sequence Information
- Coding Sequence
- atGGTGCGGaactacaaaagaaaaaaagagaCCAAATACACAGAAGAACAGTTGAATGAAGCAGTTGTAGCTGTTCGCACAAAAAAACTTAACAGCTATGATGCAGCACAAAGATACAATATACCGAGATCTACAGTAATCTCTAGACTATATGGTACTCGAGGAGCTAAAATGCCCAGAGTTGGAAGACCTGGTCTTTTCGCAAAGCGACATAAGCTCTCATACAAAAAACCACAATCTGTGGAAATTGCACGGAAGAAGGCATGCAACCCGTTTGTTATATATGAGTATTTTGATTTGCTTGAAAAAGTTACTCGGGAGTTAGAACTTTGCAATAAACCCGAACAAATTTATAACTTAGATGAGACGAGTTTTTGCTCAGATCCATCCAAAAGCAAAATTGTTGGATTAACTGGATTCCAATCAACTAGGACGACAAGTGGCCCAGCTCGTGAAAATACGACAGTTTTGCTCGCTGCTAATGCAATTGGAGGAAAAATACCGCCTTTGGTTATATTCCAAGGCAAATATTTATGGAACGAATGGATGTACCAaaacgaaaatataaaaattagccAAAAAGGATGGATGGAGACTACTATTTTTGAAAAGTACTTGAAAGACGTTTTCATACCCGCCGTCGGTGACAAAAGACCCGTGTTGCTGATTTACGATGGGCACTCCACACATGTAGATTTGAATGTGATCGAATTGGCAGCAACTAACGGAATCACAATTATAAAATTACCCCCCCATTCATCGCATATACTGCAACCCCTAAATTGTAGCGCTATGAAACCGCTTAAGGATAGATGGGAAGATGAACTTATTAAATGGCAGCGCTTACATGTTGGTTCAAAATTACCAAAAGCAGAGTTTGCAAGAATATTAACGGAAATTTGGGATACTTTGAATCCAGTGATTTTGGAAAACGGATTCAAAAGAACTGGAATTTTTTCTGTTAACCGGGACGCAATTGGGAAAGACAAATTTGACTCTTTGTCGTGGCAAAAGTGGTAG
- Protein Sequence
- MVRNYKRKKETKYTEEQLNEAVVAVRTKKLNSYDAAQRYNIPRSTVISRLYGTRGAKMPRVGRPGLFAKRHKLSYKKPQSVEIARKKACNPFVIYEYFDLLEKVTRELELCNKPEQIYNLDETSFCSDPSKSKIVGLTGFQSTRTTSGPARENTTVLLAANAIGGKIPPLVIFQGKYLWNEWMYQNENIKISQKGWMETTIFEKYLKDVFIPAVGDKRPVLLIYDGHSTHVDLNVIELAATNGITIIKLPPHSSHILQPLNCSAMKPLKDRWEDELIKWQRLHVGSKLPKAEFARILTEIWDTLNPVILENGFKRTGIFSVNRDAIGKDKFDSLSWQKW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -