Psmi068397.1
Basic Information
- Insect
- Parnassius smintheus
- Gene Symbol
- -
- Assembly
- GCA_036936625.1
- Location
- JAUPFT010000026.1:3595015-3596933[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.065 4.2e+02 3.7 0.0 46 83 102 139 89 143 0.78 2 4 0.0019 12 8.6 0.3 49 86 200 236 179 237 0.78 3 4 0.18 1.2e+03 2.2 0.0 50 83 292 324 275 326 0.82 4 4 0.0017 11 8.8 0.0 51 83 393 424 368 426 0.85
Sequence Information
- Coding Sequence
- ATGGACTGGAATAATTCACATAATCAAGGTTATTGGTTTGTACTTCGAGAAGATCAAAGTAATGTAATATTTAGCAGTAACAATTTTACTATTCAAAACCCTCAAATTGCAGGTCCGGAGACAAAATACATTGTCGATGATGTTGATAACAAGCAGTACATACAAATCAATGAAGCTCCTACCACTATACAAAATGAAACTGTAGATCAATGTGACAAAGAAATTTTAGAGCCATCAAAGGATGATTACTTCTgggatagaaataaaataaaattactgctCACACTATGTCTAGAAGACAAATTTAAAATGGTTAATAAAGATAAAATGTTATGGAATGATATAGCTGTCATCGTGGGTACATCGCCAGATGAATGTGATAAAAAATTTAGGAACCTGAGAAGAACTTATATTaggttatataaaaagaaaaaattaggCAAGGATATAAAATGGATTCACTACAATATTTGTGAAGAAGTCTTTAAAGATTGTAAATCATTGTCTCCATCAATACTTGAATCTTGGGAAGATAGCAAAATTAGAAGATTGCTTAATTTGTATttagaaaacataaataaattcagAAGCCGTGAATGCTTGCAAAAAGATGTTTGGAAAGAAATTGCTTCTCAATTAAACACCACCGAGTATAATTGCTATCataagtttaaaaatttaaaaagaacttATTTCAATTGGTTAGAAAGGAATCAGGAAACTGGCAAGTTAATTAAGTGGCCCTACCAGCACTACTTTGAGAGGATATTTTATAACTACAATCCCAATGCTGGTCCTTGGGACAGAAATAAAATAAGACAACTTATAGATGCATATGGCCAAATAGCCCACAAATTCAGGAACCCAAGGTTTCAAAAAAAGGAGCTTTGGAAGGAAATTTCAAATATAGTTGGGGAAAGTCCAAGTAGTTGTGATAGAAAATTTAGAAACTTAAAACAAACATATATTAGATTAAAAATTAGGGCTGAGTCTGGAAGGTCAATAACAAAGTGGTGTTATTATAATGCTTTTGAATCAATATATGAAAGAAATAGGTACCATACAAATGATGACACCTCAAGCTTAGTATATAAAAGTCATCAAGAGGATTATGTCGTACAACTCTTAacattttatttagaaaataaacaTAAGTTCAGGGATCCACTTACGAAAAATAAAAAGCTGTGGCGTCAGATAGGTCCTAGATTGGGCTTGACTCCAGAAGAATGtgataaaaaatttagaaatttaaaacaaacttacATAAGGTTAGCAGGGAGAAAGAGAGAAACTGGTAAAAGTAATCAATGGCCATATTATACTTACTTTGAGCAAATTTATGATGAGCCGAGACTACACGGAGAATGTAATCACTGGTGTGGAGTTGATAATGTAACTCTGACATCAATAAAGAAAGTTGTCAGAGATATTCATGAGAAGCAGGACAATGATAAGTTTGAAAAATTAGTTCAAGTGATTGATGATTCAAATGCTATTCAAAGAGAAAGGAACAAAATACTCAAAGCACTTCTCCACAGAAAATCTCATTTACCCCAGATACAGTAA
- Protein Sequence
- MDWNNSHNQGYWFVLREDQSNVIFSSNNFTIQNPQIAGPETKYIVDDVDNKQYIQINEAPTTIQNETVDQCDKEILEPSKDDYFWDRNKIKLLLTLCLEDKFKMVNKDKMLWNDIAVIVGTSPDECDKKFRNLRRTYIRLYKKKKLGKDIKWIHYNICEEVFKDCKSLSPSILESWEDSKIRRLLNLYLENINKFRSRECLQKDVWKEIASQLNTTEYNCYHKFKNLKRTYFNWLERNQETGKLIKWPYQHYFERIFYNYNPNAGPWDRNKIRQLIDAYGQIAHKFRNPRFQKKELWKEISNIVGESPSSCDRKFRNLKQTYIRLKIRAESGRSITKWCYYNAFESIYERNRYHTNDDTSSLVYKSHQEDYVVQLLTFYLENKHKFRDPLTKNKKLWRQIGPRLGLTPEECDKKFRNLKQTYIRLAGRKRETGKSNQWPYYTYFEQIYDEPRLHGECNHWCGVDNVTLTSIKKVVRDIHEKQDNDKFEKLVQVIDDSNAIQRERNKILKALLHRKSHLPQIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156072;
- 90% Identity
- -
- 80% Identity
- -