Porl005174.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius orleans
Gene Symbol
Hr39
Assembly
GCA_029286625.1
Location
JAGSMP010000011.1:8845692-8868193[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.4 1e+04 -2.4 1.7 76 137 101 176 45 238 0.46
2 4 2.8 7e+04 -5.2 7.0 99 170 271 344 254 363 0.57
3 4 9.3e-08 0.0023 19.4 0.1 1 20 445 464 445 471 0.91
4 4 4e-65 9.9e-61 208.4 0.0 164 408 507 761 473 761 0.83

Sequence Information

Coding Sequence
ATGAATACAACTATGTCGAGCGAGGGTGAAGCGGTAAAGGTAGAGGGAGGTCATGTATCCGTTACCACTATCAGCATGTCGGGCCCAGAGACCAGCAATGGTCAATTCTCGTATAGCTCAAGCGGAGTACGTATCAGCGTGTCTTCGGTACCTCACGATGAAGACTCCACTGATGCCGAAATCTCCAAGATCGACTTTACACAACATCAATACGAGGTCAACATGCGGAATAAAAAGAAGCGTTCCTCTAGTGGCGTTCAATGTGACAGTCAAACGCACGAACGCGAGCGCCCCATGTCATGGGAGGGCGAGCTGTCCGACTCCGAAATGGTCATCGACACCAGCGTTAACAACGATGAGAACAGCAGTTCCATTGACATGCAGTCATCTCGCGACTCCATCGACACTCTCCGGAACGTCACCATCAAAACTGAACCTCTTAAGCCGGAAGTCTTTCAGAGCTTAGACGATCAAAGGGTATTGGATCTAAAATACTCCACGCCGCTGCAGTCGCATCAACGGAGCCTCAGTATGAATAGGATATCAGTTCTGACAGACAACACGTCCCTTTCACTCTCTCGGCGGCCTTCGTCTCCTACGAACAGCGCCAAGTCTCTGGTTCTGAACGACCAGACCACATTGCCGCTGATGACGCCCAACGTGGTTGGAGAGGCACAGAACTTGACTATAAAGAAAGAAACTCAATTATCAGAGTTAAAATGCGAAGCGGGTATGGGTATGGAAAAGTTACTAGGACTGCACGGATCGCCTCTGCTCGGGCGACTTCCTCGCGTGCAGTCCAGCGCCAGTACCGACTCCGCTGTGCACTCCATGTACACGCATAGCGTGTACAGCAGCCCGTCTGCGAGTCCGCGTCCGGCGCGTCACTATACGCCGTCCTTGTCGCGCAACAACAGCGACGCTTCGCACTCTTCCTGTTACTCCTACAGCTCCGAGTTCTCGCCCACGCACTCGCCCGTACAGAGTCGGCAGCCACATGTAGTGTACCGCGAGGCGTCGGCAGTGTTCCCCGCGTCGCCGGCGCACGACGAGGATGCTGACGCGGCCGACGAGCGGCTGCACCACCACCAGGGCATCAGCAGACAACAGCTAATCAACAGTCCGTGCCCAATATGCGGGGACAAGATCAGCGGTTTCCACTACGGGATATTCTCGTGTGAGTCGTGCAAGGGCTTCTTCAAACGAACTGTGCAAAACAGAAAGAATTACATGTGCCTCCGCGGCGGCAACTGTCCCGTTACTGTAGCTACGCGCAAGAAGTGTCCTGCTTGCCGTTTCGACAAGTGCCTCGGTTGCGGGATGAAGCTTGAAGCGATACGTGAGGATCGGACTCGAGGCGGTCGCTCTACGTACCAATGCTCGTACTCACTGTCGGGCGCCGCGTCCACGGGCTCGCTGCTGTCCGCGCACGTGCCGACAACACTACGGCACGCGTCCAGCCTCACCTGCGTGAACGGTCCAGGGTCATACAGCAGTAGAGGAGAACCCAGCAACAGTAGACTGACACCTGACATTCCACCATTATTGCAGGAGATAATGGACGTGGAGCACCTGTGGCAGTACAATGAGTCGGAGCTGAGTCGTTTGGGCAAGTCGTCGGGTGGTGCCAACCCTCTACTAGCGGCGAGCGGCATCAACCCGCACACCTCCAGTGCGGACCTGCTCGCTGACTTGTGCCACATCGCAGACCATCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGCCTGCCGCTCTTCAAGAACATATCCATCGACGACCAGATCTGCCTGCTGATCAACAGTTGGTGCGAGCTGTTGGTGCTGTCGTGCTGCTACCGCGGAGTCAGCACGCCCGGGGAAGTGCGCGTGGGAGGCGGTCGCGGCATTACACTGCATCAAAGTGCTAAGTTCGGTTTGACGCCGTGTATAGAACGCATGCTGAGCTTCACCGACCACTTGCGGAGGTTGCGGGTCGATCGATACGAGTACGTCGCGCTCAAAGTTATCGTACTGCTCACTTCAGACGCACCCGAACTGCGTGAAGCGGAGAAAGTACGAGCATCCCAAGAGAAAGCATTGGCGGCTCTGCAAGCGTACACAGCTGCGCACTCGCCAGACACTCCCGCGAAGTTCGGCGAGCTACTGTTGCGTATACCCGAGCTGCAACGAACATGCCAGTTCTTCATGCAAGTTGGTAAAGAAATGCTCAACCCCGCGAATAAGAGTAAGGACGGTGACGGTCCAAGCTTCAACCTCCTGATGGAATTACTGAGGGGCGATCACTGA
Protein Sequence
MNTTMSSEGEAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGVQCDSQTHERERPMSWEGELSDSEMVIDTSVNNDENSSSIDMQSSRDSIDTLRNVTIKTEPLKPEVFQSLDDQRVLDLKYSTPLQSHQRSLSMNRISVLTDNTSLSLSRRPSSPTNSAKSLVLNDQTTLPLMTPNVVGEAQNLTIKKETQLSELKCEAGMGMEKLLGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRQPHVVYREASAVFPASPAHDEDADAADERLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHVPTTLRHASSLTCVNGPGSYSSRGEPSNSRLTPDIPPLLQEIMDVEHLWQYNESELSRLGKSSGGANPLLAASGINPHTSSADLLADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGITLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00958006;
90% Identity
iTF_00922930;
80% Identity
iTF_01157945;