Porl039123.1
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- -
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010000173.1:182001-186510[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00025 6.3 8.3 0.3 244 275 8 39 5 39 0.92 2 3 0.33 8.1e+03 -1.9 0.2 151 168 251 268 191 284 0.60 3 3 3.2e-37 8e-33 116.2 0.7 88 275 281 462 276 462 0.95
Sequence Information
- Coding Sequence
- ATGTTTGCGTGCGCAGCGGCGTGGCTGTGGTGCGTGCAGTGGGTGGAGCTGCTGGGCGCCAGCACTGTGGCGGCGCTGGCGGCGCGCGCGCTGCTACCACGCTGGCTGGCCGCTCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACCACCGTGCTCGCCTCTACACGCACTTCAAGGTGagccgcacgcacacacacacacacacacacacagctgGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACTTCAAGGTGAgccacgcacacacacacacacacacagctgGCTGGCGCTCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACTACCGTGCTCGCCTCCTACACGCACTTCAAGGTGAgccgcgcacacacacacacacacacacacacagctgGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacacacacacacacacacacacacacacagctgGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacacacacacacacacacacacagctgGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacacacacacacacacacacacacacacacacagctgGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTAAGGGCGTGGAACCCGCGCACGCCGGAGCCGATGGCGCGCGTGTTCGCGGCGTGgcgcgcggcggcgggcggcTGGCTGCTGCGCGCGGGCGCGGCGCGCGCCGTGCTGCCCGCGCTGCTGGCCGCCGTGCGCGCCTGGGACCCCACGCGCGACACGCAGCCGCTGCACGCCTGGGTGCTGCCCTGGCACGACCTGGCCGGCGACGCGCTGGCGGCGAGCGCATACCCGCTGATCCGCGCGCGGCTGGCGGGCGCGCTGGGCGCCTGGCACCCGGCCGACGGCTCCGCGCGCCCGCTGCTGGCCGCCTGGCGCGCCGCCTGGGGCGACCAGCTGCGCCCGCTGCTGCTGCACCACGTGCTGCCCAAGCTGGAGCACTGCCTGCAGCACGCGCCGCTCGAGCTCGTCGGCCGCGAGAAcaCGGCGTGGCTGTGGTGCGTGCAGTGGGTGGAGCTGCTGGGCGCCAGCACCGTGGCGGCGCTGGCGGCGCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacacacacacacacagctgGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGa
- Protein Sequence
- MFACAAAWLWCVQWVELLGASTVAALAARALLPRWLAALAAWLNTAPPHHRARLYTHFKVSRTHTHTHTHTAGWPRWPPGSTPRRRTPPCSPPTLQGEPRTHTHTHSWLALWPPGSTPRRRTTVLASYTHFKVSRAHTHTHTHTAGWPRWPPGSTPRRRTTVLASYTHFKVSRTHTHTHTHTQLAGRAGRLAQHRAAARHRARLLHALQGEPHAHTHTHTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHTHTHTHTHTHSWLAALAAWLNTAPPHATVLASYTHLRAWNPRTPEPMARVFAAWRAAAGGWLLRAGAARAVLPALLAAVRAWDPTRDTQPLHAWVLPWHDLAGDALAASAYPLIRARLAGALGAWHPADGSARPLLAAWRAAWGDQLRPLLLHHVLPKLEHCLQHAPLELVGRENTAWLWCVQWVELLGASTVAALAARALLPRWLAALAAWLNTAPPHATVLASYTHFKVSRTHTHTAGWPRWPPGSTPRRRTPPCSPPTRTSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -