Porl009521.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius orleans
Gene Symbol
-
Assembly
GCA_029286625.1
Location
JAGSMP010000021.1:7000085-7002340[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-09 5.3e-06 28.0 0.0 3 38 10 46 8 50 0.92

Sequence Information

Coding Sequence
ATGTCTAAAAAACGACAATACGGCAAAGAAACAATAGATAAGGCTCTAAAATTTATTGAGAATAAAGAGGGTTCAATTCGACAGGCGGCAAAACAATTTGGTGTCCCCAGAAGTAGCctccaatttaaaattaaaaatcctgACACAAAGTTTAAGTCTGGACCAGATCCAGTGCTAACTGAAGCTGAAGAAAACAGTTTATGTGACTTCATCATACAACTATCAAAGCGTGGCTTCCCAAGAAAGAAAGAGGATATCCAATTATGTGTCCAGAATTTTTTGCAACAAATCCGAGACCCAACCTTTCGAGACAACAAACCGGGAGATGTGTGGTTTAAGGCTTTCCTGAAAAGACACCCTAATATTTCTATTCGAACATCAGAAGGAGTTACCAATGCAAGCGCTTGTGTTTCTGAACAGGATATTAGGAAATGGTTTCAGGAAATAAAGCAGTATTTTGACGAGGAAGAACTAAATGACGTCATTCAAGATCCCATAAGAGTATTCAATGCCGATGAAACTGGATTCAATATTTGCCCGAAAACAGGCAAAGTATTGGCTGAGAAAGGGTGCAAAAATGTGTACCAGATAGAAAAAGGATCTTCTAAAGAAAAcattacagttttatttacGTTTTCTGCTGCTGGACACATCTTTAGGCCAATGATTATCTATCCTTATAAACGGATACCTGACCGAGTTTCGTTGAGTGTGCCGTCTGGTTGGGGAATAGGGCGAAGCGACACAGGTTGGATGACTGCAGCAGTTTTTTATGATTATATCTCTAACTGTCTGCACCCACAAATTTTAGAAAGTAATATCCCACTACCAGTAATTCTATTTGTCGACGGACACAAAACCCATATAACAATAGAAGTATCAGAACTATGCCGCCGTCTTCAAATACATCTAATAGCGCTTTATCCAAACGCAACTCGTATACTACAACCAGCAGATGTCGCAGCTTTTCGCCCAATAAAGGTTGCTTGGAAGAAGGTACTGCGCGATTGGTACGCTGCGAATAATTACCAAAAGAGTCTGACCAAAGAAACCTTTGCTCCACTGTTAAAAACAGTTGTAGACTCGTGTTCTAAGAAAGAGACATTAATAAATGGATTCAGAGTATCCGGTTTATGTCCATTTGAACCAAATAATGTCGATTTTAGCAAGTGCATTGCAAGGGTAAACCAACCCGATGATACATCCACGTCAGAAAAAAATGTTGAGCATAATATGAATGTGTTGACCTATTCAGAGTTTTGTAACATTGTGGGTGAATCAATTCTTGAAAAATGTCGAACAGTCTCGTCCATTTTAGAGTCAGATGATAACtttattgcaatttacaatttatggCAAAGATTTGAGGCTGCATcggaaaacaataataattatagaattAATAATGACGTGGACCGTGGCCCTTTCGACCAACCGACCAAAATCGTAGAAGACAATTATGTGACTGATATTATAGAAGATGACGAAACCCCTAGGACGATTCTTGATGAATTTACAGGtgagttaataaataaaaccgaAGAAAGAGAAGATGAAAAGAAAGAAGTGTATAGTGAGCCGACACTtcagaataatttaatagaacGTAGTCCCACTCCGCAGCCTAGTACGTCAAAACAAGTCACATATTCGACGGTTTCCATAATTTCTAATGTATCTCTAACTGATTACTTGAAACAAAACTTACCATTATCACCTAAACGACAAGGAAAGCGCCAAATAGAAAGACTGCCATTTGCTTTAACTTCAGACCAATACGTGGAAAGAATAAAAGCAAAACAGTTAAAAAAGATTGAAGAAGAAGCTGCAAAAGAGGAAAGAAAGAGACTACGAGAAGAAAAGAAGAAGGAAAAAGAGAACAGTATACCTAAGAAGAAAATCAAGAAAAAAAGTGATGGAAAaagcaaaacaaagataattgAAGAAGATATATGCaaagaaaatactgaaaatacaTATAAGGTTAATgaacaaaaagttttttgtgatttttgttcGAATCTCATTACACGTAGGGTTATTGAATGTAACCAGTGTAAAAAACGGTTTCATTTAAATTGTATTCCGTCATATCACAGACTCCATGTACCTGTGGAAGATGAGGATCAGTTTTTGTGTCACATGTGCTATCGAGAGAGTAATACTGACTCATCTGACGGTGATTGTGATGCCATGTTTAGCTCTGCTTGTGAAGAAGCACGAAAGCAAGGCTTCGGTTCAAACTTTATgctataa
Protein Sequence
MSKKRQYGKETIDKALKFIENKEGSIRQAAKQFGVPRSSLQFKIKNPDTKFKSGPDPVLTEAEENSLCDFIIQLSKRGFPRKKEDIQLCVQNFLQQIRDPTFRDNKPGDVWFKAFLKRHPNISIRTSEGVTNASACVSEQDIRKWFQEIKQYFDEEELNDVIQDPIRVFNADETGFNICPKTGKVLAEKGCKNVYQIEKGSSKENITVLFTFSAAGHIFRPMIIYPYKRIPDRVSLSVPSGWGIGRSDTGWMTAAVFYDYISNCLHPQILESNIPLPVILFVDGHKTHITIEVSELCRRLQIHLIALYPNATRILQPADVAAFRPIKVAWKKVLRDWYAANNYQKSLTKETFAPLLKTVVDSCSKKETLINGFRVSGLCPFEPNNVDFSKCIARVNQPDDTSTSEKNVEHNMNVLTYSEFCNIVGESILEKCRTVSSILESDDNFIAIYNLWQRFEAASENNNNYRINNDVDRGPFDQPTKIVEDNYVTDIIEDDETPRTILDEFTGELINKTEEREDEKKEVYSEPTLQNNLIERSPTPQPSTSKQVTYSTVSIISNVSLTDYLKQNLPLSPKRQGKRQIERLPFALTSDQYVERIKAKQLKKIEEEAAKEERKRLREEKKKEKENSIPKKKIKKKSDGKSKTKIIEEDICKENTENTYKVNEQKVFCDFCSNLITRRVIECNQCKKRFHLNCIPSYHRLHVPVEDEDQFLCHMCYRESNTDSSDGDCDAMFSSACEEARKQGFGSNFML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00850659; iTF_00850660; iTF_00726285; iTF_00726287; iTF_00850655; iTF_00850656; iTF_01170512; iTF_01342157; iTF_01170511; iTF_01155060; iTF_01437916; iTF_01491841; iTF_01491842; iTF_01491859; iTF_01152073; iTF_00636306; iTF_00018108; iTF_00925662;
90% Identity
iTF_01170511;
80% Identity
-