Fyps030081.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387650.1:2365872-2368112[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-08 1.2e-05 25.8 0.0 3 35 10 43 9 46 0.92
Sequence Information
- Coding Sequence
- ATGTCAAAAAAACGTCAATACCCCAAAGAATCTATAGATAAGGCCCTTAAATTTATTGAAAATAAGGAGGGTTCTATTCGACAGGCGGCAAAACAATTTGGTGTGCCTAGAAGTAGTCTTCAATTTAAAATTCAAAATCCTGACACTAAGTTTAAGTCTGGACCAGATCCAGTGCTAACTGAAGCTGAAGAAAACAGTTTATGTTCCTTCATCATACAAATGTCAAAGCGTGGCTTCCCAAGAAAAAAGGAGGATATCCAATTATGTGTCCAGAATTTTTTGCAACAAAATCCGAGACCCAACCCTTTTCGAGACAACAAACCAGGAGATGTGTGGTTTAAGGCCTTCCTGAAAAGACACCCTAATATTTCTATTCGAACATCAGAAGGAGTTACCAATGCTAGTGCATGTGTTTCAGAACAGGATATTAGGAAATGGTTTCAGGAAATACAGCAGTACATTATCGAAGAACAACTAAATGTCGTCATTCAAGATCCCACAAGAGTGTTCAATGCCGATGAAACTGGATTCAACATTTGCCCGAAAACAGGCAAAGTATTGGCTGAGAAAGGGTGCAAAAATGTGTACCAGATAGAAAAAGGATCCTCCAAAGAAAACATTACAGTTTTATTTACATTTTCTGCTGCTGGACACGTCTTTAGACCAATGATTATCTATCCTTATAAACGGATACCTGACCGAGTTTCATTGAGTATGCCATCTGGTTGGGGAATAGGGCGAAGCGACACAGGTTGGATGACTGCAGCGGTTTTTTATGATTATATCTCTAACTGTCTGTACCAACAGATTATAGAAAGTAATATTCCACTTCCTGTAGTTCTTTTTGTCGACGGACACAAAACTCATATAACTATCGAAGTATCAGAACTATGCCGTCGTCTTCAAATACATCTAATAGCGCTTTATCCAAACGCAACTCGCATACTTCAACCAGCAGATGTTGTAGCTTTTCGCCCAATAAAGGTTGCTTGGAAAAAGGTACTGCGCGATTGGTATGCTGCAAATAATTACCAGAAGAGTCTTACCAAAGAAACCTTTGCTCCACTATTAAAAACCGTTGTGGACTCGTGTTCTAAGAAAGAAACATTAATAAATGGGTTTAGAGTATCAGGTTTGTGGCCATTTGAACCAAATAATGTCGATTTTAGCAAGTGTATTGCAAGAGTAAACCAACCAGACGATACATTCATGTCAGAAACAAATGTTGAGCATAATATGAGTGTGCTGACCTATTCAGAGTTTTGTAACATTGTTGGTGAATCAATTCTTGAAAAATGTCGAACAGTCTCGTCCATTTTAGATTTAGATGATAATTTTATTGCAATTTACAATTTATGGCAAAGATTCGCGGCAGCACCGGAAAACAATAATAATTATAGAAGTAATAATGACGTGGACTGTGAAACTTCCGACCTACCGACCAGAATACAAGATAATTATGTGACTGATATTATAGAAGAAACTGAAAACCCTAGGACTATTCTTGATGAGTGTACAGGTGAGTTAATAAATATTACCGAAAAAAGAGAAGATGAAAAGAAAGTGCACAGTGAGCCGACACTTCATAATATTTCAATAGAACGTATTCCCACTCCGCAGCCTAGCACTTCAAGACAAATCACAAATCCGAAGGTTTCCATAATTTCTAATGTGTCTCTGACTGAACATTTGAAACAAAACTTGCCAGTATCATCTAAGCGCCAAGGAAAGCGTCAAATAGAAAAACTGCCATTTGCTTTAACTTCAGACAAATTCGTGGAAAAAATAAAAGCAAAACAGTTAAAAAAAGAAGAAGAAGAAGCTGCAAAAGAGGAAAGAAAGAGAATACGAGAAGAAAAGAAGAGGGAAAAAGAGAACAGTATACCTAAGAAGAAAATTAATAAAAAAAGTGATGGAAAAAGTAAAATAAAGATAACTAAAGAAGATAGAAGTAAAGAAAAGACTGAAAATACATATGAGGCTAATGAACAATTCGTTTTTTGTGATTTTTGTTTGAATCTCATTACGCGTAGGGTTATTGAATGCAACCAGTGCAAAAAACGGTTTCATTTAAATTGTATTCCATCATATCACCGACACCATGTACCTGTGGAAGATGAGGATCAGTTTTTGTGCCACATTTGTTACCGAGAGAGTAACACTGACTCATCTGACGATTGTGATGACATGTTTAACTCTGCTTGTGAAGAAGCACGGAAGCAAGGCTTCAGTACCTACTAA
- Protein Sequence
- MSKKRQYPKESIDKALKFIENKEGSIRQAAKQFGVPRSSLQFKIQNPDTKFKSGPDPVLTEAEENSLCSFIIQMSKRGFPRKKEDIQLCVQNFLQQNPRPNPFRDNKPGDVWFKAFLKRHPNISIRTSEGVTNASACVSEQDIRKWFQEIQQYIIEEQLNVVIQDPTRVFNADETGFNICPKTGKVLAEKGCKNVYQIEKGSSKENITVLFTFSAAGHVFRPMIIYPYKRIPDRVSLSMPSGWGIGRSDTGWMTAAVFYDYISNCLYQQIIESNIPLPVVLFVDGHKTHITIEVSELCRRLQIHLIALYPNATRILQPADVVAFRPIKVAWKKVLRDWYAANNYQKSLTKETFAPLLKTVVDSCSKKETLINGFRVSGLWPFEPNNVDFSKCIARVNQPDDTFMSETNVEHNMSVLTYSEFCNIVGESILEKCRTVSSILDLDDNFIAIYNLWQRFAAAPENNNNYRSNNDVDCETSDLPTRIQDNYVTDIIEETENPRTILDECTGELINITEKREDEKKVHSEPTLHNISIERIPTPQPSTSRQITNPKVSIISNVSLTEHLKQNLPVSSKRQGKRQIEKLPFALTSDKFVEKIKAKQLKKEEEEAAKEERKRIREEKKREKENSIPKKKINKKSDGKSKIKITKEDRSKEKTENTYEANEQFVFCDFCLNLITRRVIECNQCKKRFHLNCIPSYHRHHVPVEDEDQFLCHICYRESNTDSSDDCDDMFNSACEEARKQGFSTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157656;
- 90% Identity
- iTF_01170511;
- 80% Identity
- -