Porl020182.2
Basic Information
- Insect
- Parnassius orleans
- Gene Symbol
- retn
- Assembly
- GCA_029286625.1
- Location
- JAGSMP010000062.1:4426073-4435150[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-20 2.3e-16 61.9 0.0 5 89 38 121 35 121 0.88 2 2 9.7 7.3e+04 -3.8 0.0 25 38 240 253 229 254 0.71
Sequence Information
- Coding Sequence
- ATGCGATGCGATTTGGCACGCTCGCTGGGTTTTACGGCCCTTACCAAGTGCGCTGTAAAGGGTTTTACAGCCGAGAATGGAGTGAACGCAGCGATCAAACTTACGGTGCGTTTCTTGCGCCGATGTGGTCGTTTCCTTTTCGCTCGTGCGCGCACTCCTATAAACCGGCTGCCTATAATGGCGAAGTCGGTGCTCGATTTGTACGAGCTATACAACCTGGTGATAGCCCGCGGCGGTCTAGTCGAAGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTACGACTGCCGTCCTCTATCACGTCCGCCGCTTTCACATTGCGCACACAATATATGAAGTACCTGTACGACTATGAGTGTGAGAAGAAGAACCTCTCAACTCGTAGCGAGCTGGACGCGGCCATCGAAGGCAACAAGAGGGAAGGACGCCGCGCCTCCGGGCAATACGACGCGCAGGCGGCACTCGCTATGCCGTCGCTGAACCGCGGCGTGTCGCTGTCGATGCCGCTGGCCCAGCCGCTGGCATTGCCGCTGGGCGCCGTGCCCCGCCTGCCCATGCACGCACCACACCTCCACAACCACGACATCGAGTTCCGCGTGCGCGAGTACATGAAGATGATACAACAGCAACGCGACCTCATCAGAAACGGCTCTGAGTCACCGCCGGGCAGTGGCGGCACAATGATGTCGCCGCGTGAGGCTGCACTGAGTGCCATCGACGTGTCACGTCTTACTCTATGGTCGCtctacaacaacaacaacaacagccCGCAGCCGGACCTCGAGCCGCAGCGTGAGGCGCTGAACCTAAGCGAGAGCCCGAATTCGAGCGCGAGCGGGAAGCGCGAGGCGTGCCGGTCGCCGCCGCCGCCCGCGAAGCGCCGCACGCCGCGGCCGCCCTCCCCCCGCGAGCCCTCGCCGCGCCGCGCGCTCCCGCACGCGCTcccgcacgcgcacgcacacgcgccCGCGCCGCAGCTCAACGGCAACGCGAACGGCGTCAACGGCGCCGCCTTCAAGATCACCTCTAGAGGTGACGCTACCACAGGCGACCAACAACTCGTCGTCTCAATAGAGCTCAACGGAGTCACGTACGAAGGCGTTCTTTTCCCCTCACAAAATGGAAATGGACAGAACGGTCACAGGCAAATggtgtcttaa
- Protein Sequence
- MRCDLARSLGFTALTKCAVKGFTAENGVNAAIKLTVRFLRRCGRFLFARARTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLAQPLALPLGAVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRDLIRNGSESPPGSGGTMMSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSASGKREACRSPPPPAKRRTPRPPSPREPSPRRALPHALPHAHAHAPAPQLNGNANGVNGAAFKITSRGDATTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- iTF_01154802;
- 80% Identity
- -