Pgla052812.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- sip1
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000025.1:8455889-8484119[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.1e-55 1.8e-50 174.0 3.5 4 275 369 622 366 622 0.96 2 5 0.49 1.1e+04 -2.4 1.2 180 206 720 747 679 795 0.52 3 5 0.49 1.1e+04 -2.4 1.4 183 206 763 787 720 851 0.55 4 5 0.4 9.1e+03 -2.2 0.9 159 206 852 907 835 953 0.54 5 5 0.092 2.1e+03 -0.1 0.1 152 211 1005 1074 999 1110 0.72
Sequence Information
- Coding Sequence
- atgtcagATGACGAAGTAATTCGTTTTGAGATAACCGATTACGACTTAGACAATGAATTCAACCCTAACAGAAACCGTAAAGCTAAGAAAGAACATCAAATATAtgGTGTTTGGGCTAAAGACAGTGATGAGGAAGACAATGAAGATAATATCAGGCAGAGATCACGGAAACCTAAAGACTTTTCTGCCCCCATTGGATTTGTTGCGGGTGGAGTTCAGCAGGCCGGTAAGAAGAAAGAAGCTAATAAAGAATTACAACCTACAGAGGCATCTACATCTCGGTCAAAAATTGTGGACAGTTCTGAGGAAGAAGATGGAGTAGATGAGCCTTTGACTTCGGACACTGCCGGTATAAGAAGGCAGGGTCAGGGAATGCGACCACCTAATCTCGGTGGCAATGTTGGCGCATGGGAAAAGCACACTAAAGGCATTGGGGCTAAGTTATTATTAcagATGGGTTACCAACCTGGTAAAGGTCTCGGTAAAGATCTTCAAGGAATATCTGCACCAGTGGAGGCTACTGTGAGGAAAGGCAGAGGTGCAATAGGTGCATATGGACCAGAAAAGGCAGCTCTAAAAGCTAAAAAAGAAGAGGAGCGGCGCCTGAAAGAGAAAGAAGAGCAAGAGAAAGGGACTTCGGAGAAGACCTACAACTGGAAGAAGTCCCATAAAGGGCGTTACTTCTACCGCGATGCGGAGGACGTCATACAAGAGGGTAAACCCACGATGCATACTATTGGCAGTAGTGAACTGGCTCGGGTACCAGTTATCGATATGACTGGCAAACAAAAGCGCGTGTTAAGTGGGTACCACGCGCTGAGGGCGGCCGCTCCAAGATACGAGCACGAGCCAAGGAGACAGTTACAGCATTTCTCCGCACCACAGCTGACGCACAACTTGCAAATGGTCGTAGATTGTTGTGAACAGgatATCATTCAAAATGCTCGCGAGCTTCAAGCGGCAGAAGATGAGATAGTCGTTCTAGAAAGGGACTTAGAAGAATGTAACAAAAATCTCTTAGAACAAGATGAAGTGCTCAATAAAGTAGAAACTATATTGCAAAGGGTCGAGAAGTTGAATAAGCCTGATGTGTCTTTAGAAACAGCGTATGAAGTGCTTGCAGATTTAAAGGAAACTTTCCCTCTAGAATACGAAATGTTCGGGCTCGGCACTATAGGAGGTAACATAGTCAGCCCCCTACTCAGTGCTCTACTAGCGAAGTGGGACCCGCTACAGTCTCCAGACGAACCCATTCCAACATTCCTGAAGTGGAAGAAACTGCTCACAGAGGAAGCTTACAATAGTTTACTGTGGCAACACTTCATACCCCATGTTACTACGGCAGCAGAGGCGTGGAACCCGCGCACGCCGGAGCCGATGGCGCGCGTGTTCGCGGCGTGGCGCGCGGCCGCGGCCGACTGGCTGCTGCGCGCCGGCGCCGCGCAGGCCGTGCTGCCCGCGCTGCTGGCCGCCGTGCGCGCCTGGGACCCCACGCGCGACACGCAGCCGCTGCACGCCTGGGTGCTGCCCTGGCACGACCTGGCCGGGGACGCGCTGGCGGCGAGCGCGTACCCGCTGATCCGCGCGCGGCTGGCGGGCGCGCTGGGCGCCTGGCACCCGGCCGACGGCTCCGCGCGCCCGCTGCTGGCCGCCTGGCGCGCCGCCTGGGGCGACCAGCTGCGCCCGCTGCTGCTGCACCACGTGCTGCCCAAGCTGGAGCACTGCCTGCAGCACGCGCCGCTCGAGCTCGTCGGACGCGAGAACaCGGCGTGGTTGTGGTGCGTGCAGTGGGTGGAGCTGCTGGGCGCCAGCACCGTGGCGGCGCTGGCGGCGCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGGTGagccgcacgcacgcacacatacacacatacacacacagctGGCTGGCCGCGCTGGCCGCCTGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCGCCTCCTACACGCACTTCAAGcttCGAATGAATGTTAttcgagaccagaatggctgtattctgaatgacgaagttttgagtttaaggagatggaaggaatactttgaaagcgtgtttatgagtgatgagacgtttgaattaaatgaaatagaaattccgaaagaagaggaaatagatagagacataagtttagatgaaataatgaaagcaatgaaaagtatgaaagcaggtaaggcagccggatatgataaagtatctctcgaaatgctaagggctggagaaggagtggtggcagacctgctgtacaccttgtttaatttatgttgggaacttaagcgggtaccggtagactggtgcaaagccgtaatagtcccaatgtataagggaaaaggatcacagcaggactgtaaaaactaccgtggtatcagccttcttggcattgtgggaaaactgcatgcaaagaaaaTGTTCCCAGAAGAAGTGCTGAAAGAGCCGGCCGTACGGGATGCTTTCCGCAAGGCCTTGGACATGATGAACAGAAGCACGGATATCGACTCCATCGAGCCCCCGCCACCGCCGAGTTTCTCCCTCCCTGAACCTAAGGAAACTTCCAAAATCAACGAAATTCTCGCCACAACGAATCCTCTCAAGAGTTTCTCCGAACTTCTAGAATCTAGATGCATTGAGAGGGGGATAACTTTTGTCCCTATTCCAGGTAAATCAAGGGAGGGCCGGCCTTTGTACAAGATCGGGGAATTGCAGTGTTATGTAATAAGGAATGTTATTATGTACTCTGATGACGGTGGAAGATCCTTTGGACCCATCGGTATGGATCGGCTGTTGAATATGGTTGAAGAGTga
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRNRKAKKEHQIYGVWAKDSDEEDNEDNIRQRSRKPKDFSAPIGFVAGGVQQAGKKKEANKELQPTEASTSRSKIVDSSEEEDGVDEPLTSDTAGIRRQGQGMRPPNLGGNVGAWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAALKAKKEEERRLKEKEEQEKGTSEKTYNWKKSHKGRYFYRDAEDVIQEGKPTMHTIGSSELARVPVIDMTGKQKRVLSGYHALRAAAPRYEHEPRRQLQHFSAPQLTHNLQMVVDCCEQDIIQNARELQAAEDEIVVLERDLEECNKNLLEQDEVLNKVETILQRVEKLNKPDVSLETAYEVLADLKETFPLEYEMFGLGTIGGNIVSPLLSALLAKWDPLQSPDEPIPTFLKWKKLLTEEAYNSLLWQHFIPHVTTAAEAWNPRTPEPMARVFAAWRAAAADWLLRAGAAQAVLPALLAAVRAWDPTRDTQPLHAWVLPWHDLAGDALAASAYPLIRARLAGALGAWHPADGSARPLLAAWRAAWGDQLRPLLLHHVLPKLEHCLQHAPLELVGRENTAWLWCVQWVELLGASTVAALAARALLPRWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKVSRTHAHIHTYTHSWLAALAAWLNTAPPHATVLASYTHFKLRMNVIRDQNGCILNDEVLSLRRWKEYFESVFMSDETFELNEIEIPKEEEIDRDISLDEIMKAMKSMKAGKAAGYDKVSLEMLRAGEGVVADLLYTLFNLCWELKRVPVDWCKAVIVPMYKGKGSQQDCKNYRGISLLGIVGKLHAKKMFPEEVLKEPAVRDAFRKALDMMNRSTDIDSIEPPPPPSFSLPEPKETSKINEILATTNPLKSFSELLESRCIERGITFVPIPGKSREGRPLYKIGELQCYVIRNVIMYSDDGGRSFGPIGMDRLLNMVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -