Pgla048435.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- clz9
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000022.1:19679124-19680305[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-07 9e-05 24.0 0.0 9 41 26 59 18 61 0.86
Sequence Information
- Coding Sequence
- ATGCCATCCGTGTACAGACGAAAGCCTGGCAGTCGTCGATATGTCGACTACACCCaggcagatttaaaaaaatatctggatGCAATCCAATCCAAAGTGCTCACACAAAGAGCGGCTGCAGAGTTATTTAATATTCCTCGCAGCACTTTGAAAAACAAATTAACCCGGAAACACCCTAACAAACCAGGTAAACCTACAATTTTTACTGAAGAGGAAGAAAAAGCGTTTGAAGCTCACATAACTGCGCTTTCGGAATATGGGTTTCCGCTGACAGCATTCGACCTAAAAATGATAATCAAAAATTACCTTGAATCCCAGGGAAGAGTTGTAAAAATTTTTAAGAACAACATTCCTGGTAAAGACTGGTTGGCTTCTTTTCTTTCACGACATCAATCTCTTTCACGGCGACTTGCTAACAATATCAAAAGAGTCCGAGCTCAAGTGTCGGAAGATGTCATTTCCAATTTTATAGAAAACATCGACAAAGAACTAGAAAGCGTTCCACCCGAAAACATATTCAACTACGATGAAAGCAACCTTTGTGATGACCCAGGAAAAAAGACTATATTATGCAGAAGAGGAACAAAATATCCGGAAACAATAGTGAACGCTACAAAAGTTAATTTTACTGTCATGTTCTGTGGCAACGCCGCTGGGGAAACAGTTCCACCGTTCATCGTTTATAAGTCGGATCATCTCTGGTCGACTTGGACTGAAAATGGTCCCGAAGGCGCTCGATATAATAGGACAAAGAGCGGATGGATGGACAGCGCAACTTTTGAAGACTGGTTTCTCAATCATCTTATGCCAGTTCTTAAGAAGAAAAATGGTAGAAAAGTAGTGATTGGAGACAACCTTGCTTCACACATTAATAAAACAGTTTTGAACGAGTGTGAGAAGCACAATGTTAGTTTTATTTGTTTGCCACCCAACGCTACACATATACTTCAGCCACTAGACGTCGCATATTTTCGACCTTTGAAGTGCAAGTGGCGGCAAGTATTGCTTCAATGGAAGAACAGTCAACTGGGTAAGAAACTGTCGACTACACCTAAGGATCAGTATCCACGACTATTAAAAACGGCTTTGGATTCTTTGACCGAGACCAAGGCGAATTTGATTGCTGGTTTCAGAAAGACAGGCATATACCTCATTGACAAAGAGGAGCCTTTAGCTAGATAA
- Protein Sequence
- MPSVYRRKPGSRRYVDYTQADLKKYLDAIQSKVLTQRAAAELFNIPRSTLKNKLTRKHPNKPGKPTIFTEEEEKAFEAHITALSEYGFPLTAFDLKMIIKNYLESQGRVVKIFKNNIPGKDWLASFLSRHQSLSRRLANNIKRVRAQVSEDVISNFIENIDKELESVPPENIFNYDESNLCDDPGKKTILCRRGTKYPETIVNATKVNFTVMFCGNAAGETVPPFIVYKSDHLWSTWTENGPEGARYNRTKSGWMDSATFEDWFLNHLMPVLKKKNGRKVVIGDNLASHINKTVLNECEKHNVSFICLPPNATHILQPLDVAYFRPLKCKWRQVLLQWKNSQLGKKLSTTPKDQYPRLLKTALDSLTETKANLIAGFRKTGIYLIDKEEPLAR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00711795; iTF_00784339; iTF_01156340; iTF_01156341;
- 90% Identity
- iTF_01064597;
- 80% Identity
- -