Eocc006162.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- clz9
- Assembly
- GCA_950022335.1
- Location
- OX465480.1:12058423-12059433[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-08 4.4e-05 24.3 0.0 9 41 26 59 18 61 0.86
Sequence Information
- Coding Sequence
- ATGCCATCCGTGTACAGACGACAGCCCGGCAGTCGTCGGTATGTCGACTACACCCAGGCGGATTTAAAAAAATTTCTGGATGCAATCCAATCAAAAGTGCTCACACAAAGAGCGGCTGCAGAGTTGTTTAACATTCCTCGTAGCACTTTGAAGAACAAATTAACCCGTAAGCACCCTAACAAACCAGGTAAACCTACAATTTTTACTGAAGAGGAAGAAAAGGTTTTTGAAGCTCACATAACTGCGCTTTCGGAATATGGGTTTCCGCTGACAGCATTCGACCTAAAGATGATAATCAAAAATTACCTTGCATCCCAGGGAAGAGAAGTGAAAATTTTTAAGAACAACATTCCTGGTAAAGACTGGTTGGCTTCTTTTCTTTCACGACATCAGTCTCTTTCACGGCGACTTGCTAACAATATTAAAAGAGTCCGAGCTCAAGTGTCGGATGATGTAATTTCCAATTTCATAGAAAACATCGACAAAGAACTAGAAAGCGTTCCACCtgaaaacattttcaattaCGATGAAAGCAACCTTTGTGATGACCCAGGAAAGAAGACTATATTATGCAGAAGAGGAACAAAATATCCTGAAACCATAATAAACGCTACAAAAGTTAATTTTACTGTCATGTTCTATGGCAACGCCGCTGGGGAAGTAGTTCCACCGTTCATCGTTTATAAGTCGGATCATCTCTGGTCTACTTGGATTGAAAACGGTCCCGAAGGTGCTCGGTATAATAGAACAACGAGTGGATGGATGGACAGCGCAACTTTTGAAGACTGGTTTCTCAATCATCTTATGCCAGTCCTTAAGAAGAAAAATGGAAGAAAAGTGGTGATTGGAGACAACCTTGCTTCacacattaataaaacagttttgaagGAGTGTGAGAAGCATACTGTTAGTTTTATTGGCTTGCCACCCAACGCAACACATATACTTCAACCCCTAGACGTGGCATATTTTCGACCTTTGAAGTGCAAGTGGCGACAAGTATTGCTTTAA
- Protein Sequence
- MPSVYRRQPGSRRYVDYTQADLKKFLDAIQSKVLTQRAAAELFNIPRSTLKNKLTRKHPNKPGKPTIFTEEEEKVFEAHITALSEYGFPLTAFDLKMIIKNYLASQGREVKIFKNNIPGKDWLASFLSRHQSLSRRLANNIKRVRAQVSDDVISNFIENIDKELESVPPENIFNYDESNLCDDPGKKTILCRRGTKYPETIINATKVNFTVMFYGNAAGEVVPPFIVYKSDHLWSTWIENGPEGARYNRTTSGWMDSATFEDWFLNHLMPVLKKKNGRKVVIGDNLASHINKTVLKECEKHTVSFIGLPPNATHILQPLDVAYFRPLKCKWRQVLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01155107;
- 90% Identity
- iTF_01064597;
- 80% Identity
- -