Pgla008790.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000004.1:44602621-44605306[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-10 5.4e-08 34.3 0.0 4 38 17 51 14 58 0.86
Sequence Information
- Coding Sequence
- atggaatctactAAAAAGAAATACGCAAGATTCCGTTATACTCAACAACAGTTAGAGGAGGCTCTTACCCGTATAACAAATAACGATTTGTCTATTAATAAAGCCAGCAAAATATACGACATACCCAAATCAAcgttaagtaataaattaaataataaagtaccaTGGCAACGAAAAATGGGTCCATTAACACAACTAACTTTCGACGAAGAAAACAAGCTAGCAAACTGGATTTTAACAAAAGCTAAACTTGGGTTTCCAATGCACCCGGAAGAAGTTTATGATACTGTGGAAATATTCTTGAAACAAAATGAGAGggagaataaatttacaaaaggCCGACCGGGGAAAAAATGGCTTACTTTGTTTTTGCGAAGACATCCCGAAGTAACTAAAAGAAACGCTGAAATAATATCAAAAGCTAGGGCAGCGGTTACAGAAGAGGCCATCAGAAATTGGTTTACTGAATTGAACAAGTTTTTAGAGGAAGAAAATGCCTTAGACATTAAAGATGACCCGACTCGTATTTTCAATTCAGATGAAACTGGCGTCATGACTTGTCTTAAAACGGGGCTGATTTTGGGgcccaaaaattataaaaatacatacgaAATCGCAAGTGGGAAAGAAAAAGAATCAATCACAGTCCTATGTACATTCTCTGCTGATGGTACTGATGTACCACcgtttgttttgtatccatataAAAGAATGCCACCAGCCGTAATTCAAAATTTCCCAGATACTTGGTATATTGGCCGTTCCGACAGCGGGTGGATGGTATCAGTTGTATTTTTTACCTACATTAAGTTATTTTATGAATGGTTGGTAAAAAATGAAATCCGGTTGCCTGTATTGCTATTTCTGGATGGCCACAAGTCCCATATCAATCGTGACATGTTTGATTTCTGTCGTGAAAAAGGAATAATGATTTTCTGTTTATATCCCAACTCAACTCATATTTTGCAGCCCTGTGATGTAGGAATATTTGGACCGTTGAAGAAAAATTGGAAAAGGGTAGTGAGAAAGCATAAACAGGCATCCACTGTacctataacaaaacaaaattttgctGCGTTGTTTAAAATAGCTTACGACAGAAGCATTAAGCCAACTACGATAAAAAATTCATTTAGAGTTTGTGGTTTATATCCAATGTCTCCAGATGCAGTTGACTACTCACGCTGCATAAGTAATAGAAGGCAAGAAATTGCGCAACAAAACGAAAAAGGCACCACAACCTCTAGTCTTCATGACCAAAAAGAGGATCTACGAAGTACGATCAAGGTTATAGAAGGTGAAGTTGGCCAGATGATAAGAGTTGAGTTTGTCATGTCTTACAATTTAAACCGTTCTCATCCCCATCAATATTTTGAGCTGTGGAAAAAATGTAGAAATCAACTTGAGAATAAAAAACAGAGTGACACGATAACACCGAATACCCCGATCATTCCTCTTGATCTGTCAGTATCATCTATAGAAGCGTCTACTTCAAACGAGGACGATTCCAAACTGGAATCAAGCCAGGCACTGGAAAGGAATAGTGTTCCCGAAATCGTCGAGTCTGAAATTACAAATGTGGAAACTGAAGAAATGCATGCAACTAATAGTTCAATTATAATAGATTCGGCAATCCGACTGCCATCGGATAATTCCATATTATTGGGTGAGACTAGTATTTTACCCAATTTACCACCCTTTGATACAACTGAAGATGTCATAGATTTTATTATTCAGAATGAAATAGACATACCTGATGTGATACCATTGCCATGGTATGATACTTTAGAAATAATAGTAGAAAAAGACCCCATTATTGACGCTCCTAATAAATGCTCTTCTCCTCAGAATAACGCATCATCCATACCAGCCATTCCCAGTTGCAGCAATAACACTAATCAAGCAAAAAATTCGCTTGAGTCCACAGTTGATAGTCAGACTGCAATAAAGTCTgACGATGAGAAAAAAATTAAGGAGGAAGAATTAGCGAATAAAAGAAAGGAACGAGAAGAAAAAAGACTGAACAAACAAAAATCTCAAAGCAAAAAACGTGTTCAACTGAAACGCCCAAAAAATCTCCTTAAAAAGCAAGCTAAGAAAATGAAAGTAGAACATGATGATCACACACAACCTGCCGAAGATTTTATAACAACAGATAATTTAGAAGCAAGTGAAGAGACTGAAATAGAAACTAGGAGAACTACTACGACTTGTACTGAATTTAAGGACAATTTATTTGATAGATATGTACTGGTTCAATTTGAGAGTGGAAAGAGAATGCGTCATTTTGTAGGAAAAGTGATAATGGTAAATGAcaatgaaagaaaatataaagtAGATTTTCTTAGAAAAAAATCCGTTGTGGAAAATGTTGTCAATTTTGCAAAACCAATAGTGCCAGATATTGCAGAAGTTGATTTCGATGATATTAAACGTGTATTCGGTACACCGAATATTTCTAGGCGCGGATTAATTTGTTTTGACGATTTAGTATTTAAAGatattgaataa
- Protein Sequence
- MESTKKKYARFRYTQQQLEEALTRITNNDLSINKASKIYDIPKSTLSNKLNNKVPWQRKMGPLTQLTFDEENKLANWILTKAKLGFPMHPEEVYDTVEIFLKQNERENKFTKGRPGKKWLTLFLRRHPEVTKRNAEIISKARAAVTEEAIRNWFTELNKFLEEENALDIKDDPTRIFNSDETGVMTCLKTGLILGPKNYKNTYEIASGKEKESITVLCTFSADGTDVPPFVLYPYKRMPPAVIQNFPDTWYIGRSDSGWMVSVVFFTYIKLFYEWLVKNEIRLPVLLFLDGHKSHINRDMFDFCREKGIMIFCLYPNSTHILQPCDVGIFGPLKKNWKRVVRKHKQASTVPITKQNFAALFKIAYDRSIKPTTIKNSFRVCGLYPMSPDAVDYSRCISNRRQEIAQQNEKGTTTSSLHDQKEDLRSTIKVIEGEVGQMIRVEFVMSYNLNRSHPHQYFELWKKCRNQLENKKQSDTITPNTPIIPLDLSVSSIEASTSNEDDSKLESSQALERNSVPEIVESEITNVETEEMHATNSSIIIDSAIRLPSDNSILLGETSILPNLPPFDTTEDVIDFIIQNEIDIPDVIPLPWYDTLEIIVEKDPIIDAPNKCSSPQNNASSIPAIPSCSNNTNQAKNSLESTVDSQTAIKSDDEKKIKEEELANKRKEREEKRLNKQKSQSKKRVQLKRPKNLLKKQAKKMKVEHDDHTQPAEDFITTDNLEASEETEIETRRTTTTCTEFKDNLFDRYVLVQFESGKRMRHFVGKVIMVNDNERKYKVDFLRKKSVVENVVNFAKPIVPDIAEVDFDDIKRVFGTPNISRRGLICFDDLVFKDIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01153825; iTF_01154980; iTF_01158689; iTF_01153826; iTF_01158690; iTF_01153827; iTF_01158691; iTF_01158851; iTF_01153828; iTF_01158692; iTF_01158693; iTF_01154984; iTF_01154986; iTF_01154987; iTF_01154988; iTF_01154989; iTF_01158675; iTF_01155061; iTF_01158710; iTF_01158681; iTF_01158682; iTF_01153820; iTF_01158684; iTF_01158685; iTF_01158686; iTF_01158687; iTF_01158688; iTF_01154985; iTF_01153833; iTF_01158683; iTF_01153824;
- 90% Identity
- iTF_01158671;
- 80% Identity
- -