Pgla010093.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- -
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000004.1:65934446-65950495[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-06 0.002 19.6 0.0 1 32 179 210 179 217 0.91 2 2 1.3e-08 4.1e-06 28.3 0.0 2 40 255 293 254 296 0.91
Sequence Information
- Coding Sequence
- atggtTTCGTTAGACGGTGACGGTGAAATGGTGATCTTCATAGGAAGATGTAAATGTTGCCTTAATGAAggagatttaaaaaatatgtggACGCCTTACACATTTGAAGAAGAAACCGAAATTTATGGAGTGATGTTGACAGAATGTTTTGCTCTATCATGGCAGCAACCAGACGACAACATGAAGTATGTGGATATGATATGCACCTCTTGCATCTCTCGGTTACGTGATGCATTTGCCTTCAAAAGAGAAATCTTAGTGAGTGAAGAAGTGCTGCGTGAAAATCAAGATGAATtaTTTCTTCATACTACAGTGAAAGTGGAGAAAAATTTAgaagaggaagaagaagaagtcaAGTTTAGTGAAGTGGAATACCTAGAGATCCCAGATAGTTTAAACAAAGAAGAATTATGTGATGAGTATTTGTCAGATGAACAATTGCAGAGTTCAGATAGCCTACTGGTAGTAAAACGTACAAGAAAGAGGTCAAAAAGGCTCGCAAAGAAAGAGAGGAACAAAACATACAAGCAGTACACTGAAGAGGAGCTACAAATGGCCGTTGATGCGGTCCAGAACAATGAAATGTCACATACAGAAGCGGCTGAGTTTTTTAAAGTGCCCAGGAAAGCTATCTCTGCTAAGATCTGTAATATTACTGACAAAGAAGACGAACAATCGAAGAGTTCAGATGAAAATCGTAAAAGAAAATGGCCGAAGAAACTACCAAATAAAGACAGAAACAGAACATACAAGCAGTACACTGAAAAGGCACTTAGAATGGCCATCGATGCTGTCCAGAATGAAGAGATGTCACGTAGCGAAGCGTCAGCGAAGTTTAAGGTGCCTAAGAAGACTCTAGACTCTAGACTTAGACTTCAGAATTCTATTGCCAAAAACGAGGAActggatgatgatgatgcatcAAAAATAATAGACCAAGAAAAACACTACAAACTAAGAGAGGAAATTAAATCTATACTCACCTACACAAACGCTATGCCATACAAATCAAGATTGTCAAGGTACTACTGTGCATACTGCTCTACTGATGGACCAAGTTTTGATGACCCCGATGATTTGAGGATTCACACTAAAACAAAGCATGTTGATGATCGGACCAAAGGCATAGATCAGATGATGAGACCACACTGGCTAAATGAGGTGTTAAAGATTGATATACACAGTCTTCATTGTACAGTTTGCTATACTATCCTGCCGACTTGGAATGACACGCTCCGACATCTTGAAGATGTGCATGAAGTTGCTCTAGATGAGGCCTACAACAGAGTTATACCTTATGTCCTCGCAAGGGAACCGAAATGTGCTTTATGTGGAGAAGCCTTTCCGAATTACCACATGCTGGACGGACATATGAACGCCCATTACAGCAGTTACATTTGCTCCGAATGCGGTGATACTTTCTTATCAGCCAACCGACTTAATAAACATGTGAAAGTGCACAATATTGGGAGGTTCCCTTGCGAGGTTTGCGGCAAAGTGTACAATTTAAAGAGGTACATGACGAAGCACTTTACCGTGGCACATGGACAGCAGGACCAATACAAATGCTCGTACTGTCCAGAAAGATTCTCCAGACCATTCCAGAGACATCAGCATTTACTCGAAAAACACAAAGAGACGGTCAAGATAAAGACTTGTGAGATCTGCGGAAAGACATTCGACTGGATGCCCTACTACTCTGTTCATATGAGACGAAAGCATGGGAAAGAGAGGAATGCAAACAGTGAGACAAAAGATTCCTTATGTAGTATGAAGAACTTTGTTTGTGGCGTGTGTAGTGAGAGATTTAAAACTAAAGCCGGTTTAGTGCGTCACTGTCACCTGCATTACTATCCAACGGTAAAAAGTCAGACGGTTAAATAA
- Protein Sequence
- MVSLDGDGEMVIFIGRCKCCLNEGDLKNMWTPYTFEEETEIYGVMLTECFALSWQQPDDNMKYVDMICTSCISRLRDAFAFKREILVSEEVLRENQDELFLHTTVKVEKNLEEEEEEVKFSEVEYLEIPDSLNKEELCDEYLSDEQLQSSDSLLVVKRTRKRSKRLAKKERNKTYKQYTEEELQMAVDAVQNNEMSHTEAAEFFKVPRKAISAKICNITDKEDEQSKSSDENRKRKWPKKLPNKDRNRTYKQYTEKALRMAIDAVQNEEMSRSEASAKFKVPKKTLDSRLRLQNSIAKNEELDDDDASKIIDQEKHYKLREEIKSILTYTNAMPYKSRLSRYYCAYCSTDGPSFDDPDDLRIHTKTKHVDDRTKGIDQMMRPHWLNEVLKIDIHSLHCTVCYTILPTWNDTLRHLEDVHEVALDEAYNRVIPYVLAREPKCALCGEAFPNYHMLDGHMNAHYSSYICSECGDTFLSANRLNKHVKVHNIGRFPCEVCGKVYNLKRYMTKHFTVAHGQQDQYKCSYCPERFSRPFQRHQHLLEKHKETVKIKTCEICGKTFDWMPYYSVHMRRKHGKERNANSETKDSLCSMKNFVCGVCSERFKTKAGLVRHCHLHYYPTVKSQTVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156202; iTF_01155863; iTF_01157240;
- 90% Identity
- iTF_01156202; iTF_01155863; iTF_01157240;
- 80% Identity
- iTF_01155863;