Pgla007928.1
Basic Information
- Insect
- Parnassius glacialis
- Gene Symbol
- JARID2
- Assembly
- GCA_033319125.1
- Location
- JAVANC010000004.1:25318355-25347186[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-20 1.3e-16 62.6 0.0 6 89 500 580 496 580 0.93
Sequence Information
- Coding Sequence
- ATGTCGTGTTGGGGCACGTGTTTAGTGGCTATTCTTCGAATGGCTGGGTGCAGGGGCAGCTCGTTGACTGATTCATTTCTGACCTCCTCGTACCCTTCTCCTGTTCGAGTGGAAGCGAAGATCCTGAACAGTTTCACTGGTATCCAGGCCGCCAATGAAGTAAGTCTTGAGCTACCAACTGGTCAAGACGGCAACGGAGATATCGAAATTGTAGAAGATAGCGTAGATTGGACCGGTACTGAGGGAGAACAAAATGTTGATAATACCAAGCAGACAGGGTTTTTAGAGGATGAATTTGATATATGGATTAACAAAGCATTAAAGCGAAAACAACTTGCAAATCGATTTAAAGTTCCTCAGCCTCCAAAGCAGAAACAATCATCACGGCTTCAAACAGTTGCAGGCCGTCAAAGAAACAGTAATAACACTGAAATGCCTAGTACGAGCGCTTATCAGTGTCCATCTATTCGTTTTAAGACCTTTAGGGACATATTGAATGCCTCACGGAAAGAATTAAGTCAACGTTGTAGGGCCTGCTTGTATTGTATGTTTGTGGATAGAGCATTGAACATATGGAACATAACAAATCCGGGTAACAGAGACAAGTCTGTTCCTTTAAAAACAGAAGACAGTTATGAGTTCAGTGCTGACAGCCACACTAATTCATTTCAAGGGACATCATATATTAACAAACGTAAAGGACGTTCCAGACAAGCGTTTATAAATCAAAGTGTGAACACAGTCAATATGGATAGTGCACAAATGCCCTCACAATGTCCATCTTCACCTTTACTTCCTCGTCCAGAATCAAAGGATCAACTTCCATCTCCTCGCCGTTCACGCCCATTTAAAAGTTTATATTTGGATTACTCGGAAAATAGCAATAACATCATTGAGTTCAAATTGTCTTGGCTAGagcataaaaaaaaatttatagtgAGTGCCAACAAAATTCCTAGATCTCCagatataataataacaaagttaAATTCAGCCACagattctaatattttttattcaattcttGGACAAATGGATAAACTACCTCTCAATACACTGGTCAGAAGGTTATCGAACGCAGTACAACAGACGAGTCATTCAGTAATTAATAACGACGACGGTGCAATTCCGAGTACGTCGAGAGGACCTGATCCAGAACCAGTTGTTACAGTGCCTGTCGAGGAGACTTCAAACAATTTTGATACTAGAAATAAAGGAGGCCATCAAGCCGGGAAACCAAAAACAGCCTTTCCCCGTCATAATAGCAAGGCTCAACAAGTCGACGCACCAATTTTTTACCCAACTGAGGCTCAGTTCATgGATCCGATTGCATACTTCAATGAAATCATGCCAACCGCAGCTAAATTCGGATTATGTAAGATTGTACCACCAGGGACATTCAAACCGCAGTGTATCTTAAACGAAGAAATCAGATTTGGTGTGACTAACCAATACATTTCACGTTTGTATACTCGTTGGGGTCCAGCTTCCAGAGAAATGTGCGCTATAAAAGCATACTTAGCTTCGCAAAGTGTAGTATTCACAAGACCACCATTGCTCGACGGCATCGAAGTAAATCTCCCAAAATTATACGAACTCGTGCAACGGTGCGGTGGTCTCAAGAAAGTCATAGAAAAGAAACGTTGGAGTCGTGTAGCCGAAGAAATGCAACTTACCAAATCTCCGAACATTGAGAAGAAATTAGATCTaatatatgttaaatatattttacccTATGATACACTGTCTAACAAAGAACGTCTAGAAATGATGAACGCCGTAGAAGTTTACtggaataagaaaaataaaaggaTGCTTGATAGAGCATTAAATCCCTTGCACAGACAAAAACGTCTTCTGGGTGAATCGGAATCGTCTGAAgaagaagatgatgatgatttaaatatTACTGGAGCCTTATTGGAGGCCGAAGATTGTATTGTCTCAGGCAGACATATGAATTTGGCTACATTCAAAAAGgtcGCGAATAAAGTAATGGAGACATATTTTACCACGCCTAACCCTACTACACAGGAAGTAGAGAACGCATATTGGAAATTTGTCCTTCTAGCAAAAGATCACGTATGTGTTAATACCGCGTCAATAGATACTGGAGAAGAAGGTTATGGATTTACAAAAAATCAACGAGATATTATTGGAAAACACCCGTGGAACCTGaagGTGTTAAGTTGTAATGCCGGCAACATTCTGCGATATTTGGGTTCCATATTGGGTGTCACTGTACCGACACTACACCTTGGTATGGTGTTTTCAACCAGCTGCTGGCACCGAGACCCCCACGGTCTGCCTTGGATTGAATATATGCACACTGGACCCGCCAAGATTTGgtaCGGAATTCCTGATGAACAGAGTGCAAACTTCCGAAGAGCGGTCGAGTTGCTCTGTCCTACTTCATGTCAAAATAAGTCTATTTGGCTGTCATCTGATATAGTCATGATCCCACCCAATCTACTTTTAGAGCACAATGTGTCTCTTTCAAGGGTGGAACAAAAGCCTGGAGAATTCATTGTGGTCTTCCCCAAGGCTTATTCTTGCTCAATTTCTACAGGATACACTGAATCAGAAAGTGTGTACTTTGCCACTAACTCATGGTTGAAGAGTATACATCAAGTGTTTCATGTAAGCTATAATTAA
- Protein Sequence
- MSCWGTCLVAILRMAGCRGSSLTDSFLTSSYPSPVRVEAKILNSFTGIQAANEVSLELPTGQDGNGDIEIVEDSVDWTGTEGEQNVDNTKQTGFLEDEFDIWINKALKRKQLANRFKVPQPPKQKQSSRLQTVAGRQRNSNNTEMPSTSAYQCPSIRFKTFRDILNASRKELSQRCRACLYCMFVDRALNIWNITNPGNRDKSVPLKTEDSYEFSADSHTNSFQGTSYINKRKGRSRQAFINQSVNTVNMDSAQMPSQCPSSPLLPRPESKDQLPSPRRSRPFKSLYLDYSENSNNIIEFKLSWLEHKKKFIVSANKIPRSPDIIITKLNSATDSNIFYSILGQMDKLPLNTLVRRLSNAVQQTSHSVINNDDGAIPSTSRGPDPEPVVTVPVEETSNNFDTRNKGGHQAGKPKTAFPRHNSKAQQVDAPIFYPTEAQFMDPIAYFNEIMPTAAKFGLCKIVPPGTFKPQCILNEEIRFGVTNQYISRLYTRWGPASREMCAIKAYLASQSVVFTRPPLLDGIEVNLPKLYELVQRCGGLKKVIEKKRWSRVAEEMQLTKSPNIEKKLDLIYVKYILPYDTLSNKERLEMMNAVEVYWNKKNKRMLDRALNPLHRQKRLLGESESSEEEDDDDLNITGALLEAEDCIVSGRHMNLATFKKVANKVMETYFTTPNPTTQEVENAYWKFVLLAKDHVCVNTASIDTGEEGYGFTKNQRDIIGKHPWNLKVLSCNAGNILRYLGSILGVTVPTLHLGMVFSTSCWHRDPHGLPWIEYMHTGPAKIWYGIPDEQSANFRRAVELLCPTSCQNKSIWLSSDIVMIPPNLLLEHNVSLSRVEQKPGEFIVVFPKAYSCSISTGYTESESVYFATNSWLKSIHQVFHVSYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156068;
- 90% Identity
- -
- 80% Identity
- -