Basic Information

Insect: Parnassius apollo
Gene Symbol: -
Assembly: GCA_907164705.1
Location: CAJQZP010001557.1:3237686-3254328[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.00064 0.065 14.4 0.7 1 23 202 224 202 224 0.98

2 31 0.0002 0.021 15.9 0.6 2 21 258 277 257 278 0.93

3 31 2.6e-05 0.0026 18.7 0.4 3 23 310 331 308 331 0.96

4 31 4.9 5e+02 2.1 0.2 2 14 351 363 350 371 0.81

5 31 0.014 1.4 10.1 2.9 1 23 381 404 381 404 0.96

6 31 0.0011 0.11 13.7 0.1 1 23 420 442 420 442 0.96

7 31 0.0004 0.041 15.0 1.9 2 23 483 504 482 504 0.97

8 31 0.00045 0.046 14.8 3.9 2 23 545 567 545 567 0.97

9 31 0.00012 0.012 16.7 1.4 1 23 617 640 617 640 0.97

10 31 0.00086 0.087 13.9 0.1 1 23 699 721 699 721 0.97

11 31 0.033 3.4 9.0 6.3 2 23 733 754 732 754 0.96

12 31 0.073 7.5 7.9 2.3 2 23 766 787 765 787 0.96

13 31 0.016 1.6 10.0 1.1 1 23 797 819 797 819 0.98

14 31 0.00043 0.043 14.9 6.7 1 23 847 869 847 869 0.97

15 31 0.00063 0.064 14.4 6.5 1 23 880 902 880 902 0.98

16 31 0.00068 0.07 14.3 0.7 1 23 910 932 910 932 0.97

17 31 0.0011 0.11 13.6 0.1 2 23 952 974 951 974 0.97

18 31 1.1 1.1e+02 4.2 1.0 1 23 992 1014 992 1014 0.91

19 31 0.067 6.8 8.0 4.6 1 23 1021 1043 1021 1043 0.98

20 31 0.0025 0.25 12.5 4.7 2 23 1054 1076 1053 1076 0.95

21 31 0.0045 0.46 11.7 0.2 2 23 1099 1120 1098 1120 0.95

22 31 6.7 6.8e+02 1.7 5.9 2 23 1163 1185 1162 1185 0.94

23 31 0.0047 0.48 11.6 0.2 2 23 1201 1222 1200 1222 0.95

24 31 0.17 17 6.7 4.5 3 23 1230 1250 1228 1250 0.96

25 31 0.023 2.3 9.5 0.9 2 23 1261 1283 1260 1283 0.95

26 31 0.61 62 5.0 3.2 2 23 1300 1318 1300 1318 0.88

27 31 3.4 3.4e+02 2.6 1.0 2 21 1322 1341 1322 1342 0.93

28 31 0.36 37 5.7 1.9 2 23 1391 1412 1390 1412 0.93

29 31 0.00037 0.038 15.1 0.7 2 23 1423 1445 1422 1445 0.96

30 31 2.4 2.4e+02 3.1 0.3 3 23 1462 1479 1461 1479 0.78

31 31 1.8 1.9e+02 3.5 4.8 2 21 1483 1502 1482 1503 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.00064	0.065	14.4	0.7	1	23	202	224	202	224	0.98
2	31	0.0002	0.021	15.9	0.6	2	21	258	277	257	278	0.93
3	31	2.6e-05	0.0026	18.7	0.4	3	23	310	331	308	331	0.96
4	31	4.9	5e+02	2.1	0.2	2	14	351	363	350	371	0.81
5	31	0.014	1.4	10.1	2.9	1	23	381	404	381	404	0.96
6	31	0.0011	0.11	13.7	0.1	1	23	420	442	420	442	0.96
7	31	0.0004	0.041	15.0	1.9	2	23	483	504	482	504	0.97
8	31	0.00045	0.046	14.8	3.9	2	23	545	567	545	567	0.97
9	31	0.00012	0.012	16.7	1.4	1	23	617	640	617	640	0.97
10	31	0.00086	0.087	13.9	0.1	1	23	699	721	699	721	0.97
11	31	0.033	3.4	9.0	6.3	2	23	733	754	732	754	0.96
12	31	0.073	7.5	7.9	2.3	2	23	766	787	765	787	0.96
13	31	0.016	1.6	10.0	1.1	1	23	797	819	797	819	0.98
14	31	0.00043	0.043	14.9	6.7	1	23	847	869	847	869	0.97
15	31	0.00063	0.064	14.4	6.5	1	23	880	902	880	902	0.98
16	31	0.00068	0.07	14.3	0.7	1	23	910	932	910	932	0.97
17	31	0.0011	0.11	13.6	0.1	2	23	952	974	951	974	0.97
18	31	1.1	1.1e+02	4.2	1.0	1	23	992	1014	992	1014	0.91
19	31	0.067	6.8	8.0	4.6	1	23	1021	1043	1021	1043	0.98
20	31	0.0025	0.25	12.5	4.7	2	23	1054	1076	1053	1076	0.95
21	31	0.0045	0.46	11.7	0.2	2	23	1099	1120	1098	1120	0.95
22	31	6.7	6.8e+02	1.7	5.9	2	23	1163	1185	1162	1185	0.94
23	31	0.0047	0.48	11.6	0.2	2	23	1201	1222	1200	1222	0.95
24	31	0.17	17	6.7	4.5	3	23	1230	1250	1228	1250	0.96
25	31	0.023	2.3	9.5	0.9	2	23	1261	1283	1260	1283	0.95
26	31	0.61	62	5.0	3.2	2	23	1300	1318	1300	1318	0.88
27	31	3.4	3.4e+02	2.6	1.0	2	21	1322	1341	1322	1342	0.93
28	31	0.36	37	5.7	1.9	2	23	1391	1412	1390	1412	0.93
29	31	0.00037	0.038	15.1	0.7	2	23	1423	1445	1422	1445	0.96
30	31	2.4	2.4e+02	3.1	0.3	3	23	1462	1479	1461	1479	0.78
31	31	1.8	1.9e+02	3.5	4.8	2	21	1483	1502	1482	1503	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTCGGAAAATGTAGGCTCTGCCTTAAACTCGGCGACTTTTATTCCATCTTCACGATGGATAACAATCTACAGCTCGCCGAGATGGTTATGGAATGCGCCCGAGTGAAGATATATGAAGGAGATGGACTACCAGATAAAATATGCTCGGAGTGTATACAGAAACTCAGCAGCGCGCATATATTTAAGCAGCAGTGCGAGAGATCCGATCAGGAACTACGACGCAACTATGTGCCGCCGCCAGGTTTCAGTACCGCACCTTCCCCACCAAACAGACAGAGCAGCGACTCGGCTTTTTCAAACAATACTGACGTATCCAGCAACAATAAGCCTACAGCGTCACCCATTGAAAGTAAGGCCACACCAAGTCGGAGCCGCAAACGTAGTCGGGAGAGCGTTGACAATGCTTCATCCAGCAGCCAGTCCCATGACTACCGACCGAGTTCCACCAAGCGCGTTGAAGAGCTCCGGACCTCACAGAAAAGACCGAGAAAATCACCAAACACATCTTACGCTGATTCTGATTTTGACGATAACAGCGCCTCCCATTTCTCAGTCGAAACCGATTCGGATGAGCCACTATTGAAAAGCGAATATAAGTGCAAAATCTGTGGTAAAGAATTCCTCTCAAAAATGAGTGTGACTGCACACACAAAAGTGCATTATAGAAAATCTCTGACCAAGAATGCATTAGTGGACGTACCGAAACCGGCAGACACCAATGAGAGTGTGGAAGATGCTAACGACGTCGATGATAAACTAACGTGCGAGAAATGCGACAAGAcgtttaaattgaaaataatgttGAAGCGTCATCTAGAGACCTGTGACAAGACTCCGTCGAAGTCACCGATGAAAGAGTTACTGGTGTCGTTGGAGCCAATTGACGCAGGTCCGGCACCGTCGAATAAATTGGACTGCGAAATGTGCACTACAAAATTTAAGACGATAGAAAATTTAGAGAAACATATGAGGGTAGTTCACGCAGCCGTCCTCAAGCGCGATAAATACGAACAGAAGGAGAACGGAAAGGTGAGCGTCCCCTGCTTCTACTGCGGAATACATTTTGACGATTACTACCTACACGCTGCGCACTTTGAAACCTGTTCCAAAAAGGACGATTCTGTTAGCTTTACTTGTCCTGTATGCCAGAAGGTAATGACAAGGAAGAACTCGTACTTCATTCATTTAAAACATATGCATTTCGAGCCTCGACTCGACAACCGTGAAGAGGGCTCCAAACAGCCGTTTGAGTGTCGCATATGCAGTAAGAAGTTGGCAACACAAGACCAACTAATCACACACCTTGCTGCCCACATGTCTAATATAAACGACAATGAAGATGGCGCTGACGATGGTTCTCGTATGAGTCACGCAGAAGACGATACTTCGGTTACATCTAGCTACAGCAATGCGCATGTACCCAGCGGGCCATTAAAATGCAGCATGTGCGAAAAACGGTTCACTTACAAGAAGGCTCTCCTGAGTCACGAACAGAGACATCTCTCCGGAGACTTGGAGATAAAGACAGAGCCACCCGACAAGAATACGTCTAGCAGTCTGTTAAGCGAGACATTCCGTCAATCAGAGTCGGATTCTAGTCAGGAGGAAGGGGATGATAATACGTGCGACATTTGCGAGAAGCAATTCTCCTATAAACGTCTCCTGATTCATCACAAGCGGACCAAGCACAATATGAGCTCAGGCACCAAGCGAGCTAAAATTAACCTTAAGGATTGCTCCGTCCGCTGTCTGATCTGTGACTTGGAGATGAAAGTTAGTGCAATAAATGAGCACAATCAAAAGCACACATCTGTAAATATAAAGCCGAGGAATCTCTACACGTGTGCGGAGTGCTCCGAGAAGTTTAAGAGTTGTAGCTCGCTGGCAAATCACATCAAACTGGTGCACAGGCTGAAGCAGCCCCAGCAGCCCAAGCAGCCCAAGTTAGAGGGAGCCGATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGTATCAAACCAGAGTCACAACGACTTTGGGATGGTTCCGTCGAATCAGGACGGCAGTCCGCTTGTTAATTTGAGCGGATTCACTTGCCCAATATGTGGTAAGCAGATGCCTACATTGATTTCACTGAAGAGACATGTGAACTGGCATTCTAATGTTGGTAACAACATTGAGAAGAAGTTGGAGTGTTTTGTGTGTAAAGAGAAATTTAGATTTCAGTGCCATTACCGGCTGCACATGCGCGAGCACTACAACGACCCTAACCTGGACCCGAAGCTGCTGACTTGTACTATTTGCAACCGCAAGAGCAAGCATCTGCGTGCTGCGAAGGCCCATATGAACTTCCACAAGCAAACACGCTTCAAGAACAAAGACTACCAGTGCTCTATATGCAAGAGAATATTCCAATTTAGAAAAGTCTACTTGTCGCACATGGCAATACATTATAAACGCGGGGAGAGTGTGAACACTGTTGTGGGTATCGAGCTGCCGAATACCGCTGATAGAACAGTATTCGATGGAAAATATACCTGCCATCACTGCGGGAAAGTGTGCGATTCGGAGACCTCGTTAAAGCATCATATCATTTGGCACAAATCTAAAACTTCGCTCTTTGGTGCTCGCCACGAATGTCACATTTGTCATATCCAATTCACCAACAAGAGGAGATTAGAGCTCCACATCAGAACTCATTACGAGGACGACAATGGGCCATTTAAGTGTCCCGTATGTGGCAAAGGGTTTATTGACGAGGATTACCACAGGAGACATGTGAAAGGGCACAATTTCGATCACCAATCACATAAGACTAGGATTGCAAACCTCCGGAAGGATAAAGTGAAGTGCCCGATTTGCGCCCGTTTCTATCCGGACTTAGTGAAACTCATACGCCATTTAAGAAGAACCCATCCTGAGAGCAAAATGATTAAGGAAGATCCAGATGCACCTGCCCAGAACTACTTCTCGTGCAAACTGTGTGCTAAAGTATTTTTAGATGAGCGACGATTGCAGCACCATGAGGAGGCTCATTTGAGAAAGCCAGAGTTCTTTAAATGCAAATTCTGTGGCAAAAAAACCATCTCCTTGAAGAATCATAGAATTCACATTAAGTCCCACTTAACGCAGAAATATATTGACGAGCCCCTGAAATGTATGCATTGTGATGAAACCTTTACAAGAGGGTACGACTTGCACCATCACTTACGCGATGTGCATGATATTAATGAGACATGGATTGCTGAGAGAACAGAGAAGACTTTAAATGGGCCATTGAAGGAATTGCAGTGCTCCATCTGTCTTAAGATCCTAGCCAGTAAGGGCAACTTTGAACGCCATATTGACTATCACAACTCGCTTAGGTGTAATTACTGCTTTGACTACTTTAGCTCTTTGAGGTTCTTAGAGGGGCATTTAGCATTCAGCTGTGAGAAAAAGAAATTGATAGGGGACACTGAAGTGTATCCCAAGAAGGTAAAGTGTCACATATGTTACAAAGCTTTCCATCTACAAGTGAAGTTAGACTGTCATCTACGCACACAACACAATATTAAAGTTTCTAAAGAAGTATCTGAAGGCAAGAAGGAGATTGTCTGTGATTACTGCTTCCGAGTGTTTGAGAATGAGTATGCTTTGAGTACCCACAAGATTTACCACCGCACGATTGGATATTACGGCTGCTTGTATTGCAATCGAAAGTTCAACACCATTACCCTGTACAAAAAACACAAGAATCATCATTTATCGCAACTTAATGTTGATAACCCCACAAAATGCGAGCACTGTGATGAGAGGTTTGTTGCATTCCGAGAGATGATATATCATATGAGGGATGTTCACGGCGATGAAAAAGAGTGGATTGTAATGCCTAAAGAGTCCATAGAGGAGAAGTGCCCCATTTGTAACAAAATATTCTTTAATCTTCATAAACATTTGACTTATCATGAAGAGAACAGGTGCAAAAAATGCGCAGAATATTTCTATTCACAAATTGACTTCGATAATCACCTCTGTGCCATAGAAAGCGACGAGGAAGTAGACGATAATAATGAGAACGATTTACGACCAAAATATGAAGAGTGTGCTTTTTGCTTCAAGCCCACAACTAAGAAGAACTCGCAGCGTTTGCATGATCACATACATAAAGTCTCTGGATCGATTTCGTGCCGATTTTGTCATCTcaaatttaaaactattgatgcGTTTAACATTCATGCATTCTCCCACCGTAGCAGGAAGTacaataaaaagccgattaaatGTCGAAAGTGTGGCGAGAAGTTTGTACGCTATGGCCCCTTCATGAAGCACATGAAGTCTGTGCATAAGTCAACTCAGAAATTACATTATAGAACCATGGTAAAGCCAGAACCTTGCGCTGTTTGTGGTGAAGAGTTCCCAAATCTCCATAACCACTATCGAGCTCACTTGCAGAACCAGTGTCAATCATGTCACAAATACTTTACGTCATATAAACTATTTTCAATGCATCAGTGTGATAAAGAAGATTCTGACCCAACTAAAGTTTTCACATGTGATAAAGATCTAGTAAATTTGATTAATGCTTACACACCTAAAGACGAGAATGATGATGAGAAGTTTTATGGGCATCCTGATGATGAAGACGAAGTAGAGGAGGAACCTGAAAAAGATATTCGAGATAATGAATATACAACACAGGATGAAGAGAGTCAGAACTCATCAGATGCAAACTTACATATGATGGTCCATACGCCTATTAtatcagatgtgttgtcactttaCCAAAAGAAGGAAGACAAGCAACTCGATCCTGCTAATGAAGTTGTTAGTTTGTCAGATGACGACACTTTGGATGGTGAAGAAGTTGTAACTGTTATAACAATTGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKIYEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSTAPSPPNRQSSDSAFSNNTDVSSNNKPTASPIESKATPSRSRKRSRESVDNASSSSQSHDYRPSSTKRVEELRTSQKRPRKSPNTSYADSDFDDNSASHFSVETDSDEPLLKSEYKCKICGKEFLSKMSVTAHTKVHYRKSLTKNALVDVPKPADTNESVEDANDVDDKLTCEKCDKTFKLKIMLKRHLETCDKTPSKSPMKELLVSLEPIDAGPAPSNKLDCEMCTTKFKTIENLEKHMRVVHAAVLKRDKYEQKENGKVSVPCFYCGIHFDDYYLHAAHFETCSKKDDSVSFTCPVCQKVMTRKNSYFIHLKHMHFEPRLDNREEGSKQPFECRICSKKLATQDQLITHLAAHMSNINDNEDGADDGSRMSHAEDDTSVTSSYSNAHVPSGPLKCSMCEKRFTYKKALLSHEQRHLSGDLEIKTEPPDKNTSSSLLSETFRQSESDSSQEEGDDNTCDICEKQFSYKRLLIHHKRTKHNMSSGTKRAKINLKDCSVRCLICDLEMKVSAINEHNQKHTSVNIKPRNLYTCAECSEKFKSCSSLANHIKLVHRLKQPQQPKQPKLEGADLADFCEVVVTKAEPLVSNQSHNDFGMVPSNQDGSPLVNLSGFTCPICGKQMPTLISLKRHVNWHSNVGNNIEKKLECFVCKEKFRFQCHYRLHMREHYNDPNLDPKLLTCTICNRKSKHLRAAKAHMNFHKQTRFKNKDYQCSICKRIFQFRKVYLSHMAIHYKRGESVNTVVGIELPNTADRTVFDGKYTCHHCGKVCDSETSLKHHIIWHKSKTSLFGARHECHICHIQFTNKRRLELHIRTHYEDDNGPFKCPVCGKGFIDEDYHRRHVKGHNFDHQSHKTRIANLRKDKVKCPICARFYPDLVKLIRHLRRTHPESKMIKEDPDAPAQNYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKSHLTQKYIDEPLKCMHCDETFTRGYDLHHHLRDVHDINETWIAERTEKTLNGPLKELQCSICLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLIGDTEVYPKKVKCHICYKAFHLQVKLDCHLRTQHNIKVSKEVSEGKKEIVCDYCFRVFENEYALSTHKIYHRTIGYYGCLYCNRKFNTITLYKKHKNHHLSQLNVDNPTKCEHCDERFVAFREMIYHMRDVHGDEKEWIVMPKESIEEKCPICNKIFFNLHKHLTYHEENRCKKCAEYFYSQIDFDNHLCAIESDEEVDDNNENDLRPKYEECAFCFKPTTKKNSQRLHDHIHKVSGSISCRFCHLKFKTIDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVRYGPFMKHMKSVHKSTQKLHYRTMVKPEPCAVCGEEFPNLHNHYRAHLQNQCQSCHKYFTSYKLFSMHQCDKEDSDPTKVFTCDKDLVNLINAYTPKDENDDEKFYGHPDDEDEVEEEPEKDIRDNEYTTQDEESQNSSDANLHMMVHTPIISDVLSLYQKKEDKQLDPANEVVSLSDDDTLDGEEVVTVITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01157036;
90% Identity: iTF_01157036;
80% Identity: -